Project name: AAV1_3mer_M4

Status: done

Started: 2026-10-21 17:44:54
Settings
Chain sequence(s) DGVGNASGNWHCDSTWLGDRVITTSTRTWALPTYNNHLYKQISSASTGASNDNHYFGYSTPWGYFDFNRFHCHFSPRDWQRLINNNWGFRPKRLNFKLFNIQVKEVTTNDGVTTIANNLTSTVQVFSDSEYQLPYVLGSAHQGCLPPFPADVFMIPQYGYLTLNNGSQAVGRSSFYCLEYFPSQMLRTGNNFTFSYTFEEVPFHSSYAHSQSLDRLMNPLIDQYLYYLNRTQNQSGSAQNKDLLFSRGSPAGMSVQPKNWLPGPCYRQQRVSKTKTDNNNSNFTWTGASKYNLNGRESIINPGTAMASHKDDEDKFFPMSGVMIFGKESAGASNTALDNVMITDEEEIKATNPVATERFGTVAVNFQSSSTDPATGDVHAMGALPGMVWQDRDVYLQGPIWAKIPHTDGHFHPSPLMGGFGLKNPPPQILIKNTPVPANPPAEFSATKFASFITQYSTGQVSVEIEWELQKENSKRWNPEVQYTSNYAKSANVDFTVDNNGLYTEPRPIGTRYLTRPLDGVGNASGNWHCDSTWLGDRVITTSTRTWALPTYNNHLYKQISSASTGASNDNHYFGYSTPWGYFDFNRFHCHFSPRDWQRLINNNWGFRPKRLNFKLFNIQVKEVTTNDGVTTIANNLTSTVQVFSDSEYQLPYVLGSAHQGCLPPFPADVFMIPQYGYLTLNNGSQAVGRSSFYCLEYFPSQMLRTGNNFTFSYTFEEVPFHSSYAHSQSLDRLMNPLIDQYLYYLNRTQNQSGSAQNKDLLFSRGSPAGMSVQPKNWLPGPCYRQQRVSKTKTDNNNSNFTWTGASKYNLNGRESIINPGTAMASHKDDEDKFFPMSGVMIFGKESAGASNTALDNVMITDEEEIKATNPVATERFGTVAVNFQSSSTDPATGDVHAMGALPGMVWQDRDVYLQGPIWAKIPHTDGHFHPSPLMGGFGLKNPPPQILIKNTPVPANPPAEFSATKFASFITQYSTGQVSVEIEWELQKENSKRWNPEVQYTSNYAKSANVDFTVDNNGLYTEPRPIGTRYLTRPLDGVGNASGNWHCDSTWLGDRVITTSTRTWALPTYNNHLYKQISSASTGASNDNHYFGYSTPWGYFDFNRFHCHFSPRDWQRLINNNWGFRPKRLNFKLFNIQVKEVTTNDGVTTIANNLTSTVQVFSDSEYQLPYVLGSAHQGCLPPFPADVFMIPQYGYLTLNNGSQAVGRSSFYCLEYFPSQMLRTGNNFTFSYTFEEVPFHSSYAHSQSLDRLMNPLIDQYLYYLNRTQNQSGSAQNKDLLFSRGSPAGMSVQPKNWLPGPCYRQQRVSKTKTDNNNSNFTWTGASKYNLNGRESIINPGTAMASHKDDEDKFFPMSGVMIFGKESAGASNTALDNVMITDEEEIKATNPVATERFGTVAVNFQSSSTDPATGDVHAMGALPGMVWQDRDVYLQGPIWAKIPHTDGHFHPSPLMGGFGLKNPPPQILIKNTPVPANPPAEFSATKFASFITQYSTGQVSVEIEWELQKENSKRWNPEVQYTSNYAKSANVDFTVDNNGLYTEPRPIGTRYLTRPL input PDB
Selected Chain(s) A,B,C
Distance of aggregation 10 Å
FoldX usage Yes
pH calculations Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       PDB-Info: The input structure is globular. Max score is recommended for pH analysis.  (00:00:10)
[INFO]       FoldX:    Starting FoldX energy minimization                                          (00:00:10)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:06:56)
[INFO]       agg3D:    Running pKa-ANI on                                                          
                       /STORAGE/DATA/lcbio/aggreskan/32e7a6f82a73e8/tmp/folded.pdb                 (00:06:56)
[INFO]       Main:     Simulation completed successfully.                                          (00:20:52)
Show buried residues

Minimal score value
-3.3678
Maximal score value
1.3187
Average score
-0.4332
Total score value
-673.1702

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
17 D A -2.5814
18 G A -1.3643
19 V A 0.3136
20 G A -0.6683
21 N A -1.7738
22 A A -1.3262
23 S A 0.0000
24 G A -1.3283
25 N A -1.0833
26 W A -0.2360
27 H A -1.1208
28 C A -0.9067
29 D A -1.7488
30 S A -0.8005
31 T A -0.0861
32 W A 0.0989
33 L A 0.3173
34 G A -1.0808
35 D A -2.2169
36 R A -1.0876
37 V A 0.0000
38 I A -0.2060
39 T A 0.0000
40 T A 0.0000
41 S A 0.0000
42 T A 0.0000
43 R A 0.0000
44 T A 0.4484
45 W A 0.0000
46 A A 0.6587
47 L A 0.0000
48 P A 0.0861
49 T A -0.2028
50 Y A -0.1538
51 N A -0.6307
52 N A -0.9683
53 H A -0.2564
54 L A 0.2597
55 Y A -0.1700
56 K A -1.1960
57 Q A -1.3001
58 I A -0.4007
59 S A -0.4844
60 S A 0.0000
61 A A -0.3890
62 S A -0.3209
63 T A -0.4385
64 G A -0.7696
65 A A -0.8068
66 S A -1.1053
67 N A -1.7613
68 D A -1.1883
69 N A -0.9249
70 H A -1.0464
71 Y A -0.3942
72 F A 0.0000
73 G A 0.0000
74 Y A -0.3542
75 S A 0.0000
76 T A 0.0000
77 P A 0.0000
78 W A 0.0000
79 G A 0.0000
80 Y A 0.0000
81 F A 0.0000
82 D A 0.0000
83 F A 0.0000
84 N A 0.0000
85 R A -0.2321
86 F A 0.0000
87 H A 0.0000
88 C A 0.0000
89 H A 0.0000
90 F A 0.0000
91 S A -1.1142
92 P A -1.4467
93 R A -2.5219
94 D A -1.8254
95 W A 0.0000
96 Q A -2.1229
97 R A -2.5419
98 L A 0.0000
99 I A 0.0000
100 N A -1.2950
101 N A -1.9413
102 N A 0.0000
103 W A -0.9935
104 G A 0.0000
105 F A 0.0000
106 R A -0.9007
107 P A 0.0000
108 K A -2.0675
109 R A -2.5531
110 L A 0.0000
111 N A -1.5782
112 F A 0.0000
113 K A -1.0769
114 L A 0.0000
115 F A 0.0000
116 N A -1.2605
117 I A 0.0000
118 Q A -0.9814
119 V A 0.0000
120 K A -0.4382
121 E A -0.0835
122 V A 0.6165
123 T A 0.3118
124 T A -0.4285
125 N A -1.7705
126 D A -2.0934
127 G A -0.9365
128 V A 0.4927
129 T A 0.4907
130 T A 0.8404
131 I A 1.2674
132 A A 0.0919
133 N A -1.0653
134 N A -0.6476
135 L A 0.2758
136 T A -0.0417
137 S A 0.0000
138 T A -0.5700
139 V A 0.0000
140 Q A -0.5308
141 V A 0.0000
142 F A 0.0000
143 S A -0.4835
144 D A 0.0000
145 S A -1.1666
146 E A -2.1629
147 Y A -1.2278
148 Q A -0.9611
149 L A 0.0000
150 P A 0.0000
151 Y A 0.0000
152 V A 0.0000
153 L A 0.0000
154 G A -0.0999
155 S A -0.1148
156 A A 0.0000
157 H A 0.0000
158 Q A -0.4672
159 G A -0.0862
160 C A -0.0277
161 L A 0.0000
162 P A 0.1489
163 P A -0.0213
164 F A 0.7005
165 P A 0.1157
166 A A -0.0755
167 D A -0.3667
168 V A 1.3036
169 F A 0.0000
170 M A 1.2569
171 I A 0.0000
172 P A 0.0000
173 Q A 0.1229
174 Y A 0.0000
175 G A 0.0000
176 Y A 0.0000
177 L A 0.0000
178 T A 0.0000
179 L A 0.0477
180 N A 0.0000
181 N A -1.1375
182 G A -1.0548
183 S A -0.9739
184 Q A -1.1443
185 A A -0.3579
186 V A 0.2063
187 G A -0.1451
188 R A -0.1561
189 S A 0.0000
190 S A 0.0000
191 F A 0.3758
192 Y A 0.0000
193 C A 0.4034
194 L A 0.0000
195 E A -0.7739
196 Y A 0.7604
197 F A 0.0000
198 P A -0.4283
199 S A -0.6467
200 Q A -1.1999
201 M A -0.3069
202 L A 0.0000
203 R A -1.8576
204 T A -1.3974
205 G A 0.0000
206 N A -2.1365
207 N A -1.7709
208 F A 0.0000
209 T A -0.5667
210 F A -0.2824
211 S A -0.8629
212 Y A -0.9821
213 T A -1.6301
214 F A 0.0000
215 E A -2.2869
216 E A -2.2914
217 V A 0.0000
218 P A -0.6123
219 F A -0.1030
220 H A 0.0000
221 S A 0.0000
222 S A 0.0000
223 Y A 0.0000
224 A A 0.0000
225 H A 0.0000
226 S A 0.0000
227 Q A 0.0000
228 S A 0.0000
229 L A 0.0000
230 D A 0.0000
231 R A 0.0000
232 L A 0.1862
233 M A 0.0000
234 N A 0.0000
235 P A 0.0000
236 L A 0.4384
237 I A -0.0238
238 D A -0.6968
239 Q A 0.0000
240 Y A 0.0000
241 L A 0.0000
242 Y A 0.0000
243 Y A -0.0183
244 L A 0.0000
245 N A -0.5169
246 R A -0.9850
247 T A 0.0000
248 Q A -2.2255
249 N A -2.1718
250 Q A -2.1885
251 S A -1.4760
252 G A -1.2773
253 S A -1.0689
254 A A -1.4305
255 Q A -2.6313
256 N A -2.7778
257 K A -2.4659
258 D A -1.8714
259 L A 0.0000
260 L A -0.5357
261 F A 0.0000
262 S A 0.0000
263 R A -0.6217
264 G A 0.0000
265 S A -0.3045
266 P A -0.0814
267 A A -0.1460
268 G A -0.1794
269 M A 0.0000
270 S A 0.0000
271 V A 0.0757
272 Q A 0.0000
273 P A 0.0000
274 K A -0.1209
275 N A 0.0000
276 W A 0.0000
277 L A 0.0000
278 P A 0.0000
279 G A 0.0000
280 P A 0.0000
281 C A 0.0000
282 Y A 0.0000
283 R A 0.0000
284 Q A 0.0000
285 Q A 0.0000
286 R A -0.0983
287 V A 0.0000
288 S A 0.0000
289 K A -1.5842
290 T A -1.1760
291 K A -1.7471
292 T A -1.2877
293 D A -1.2724
294 N A 0.0000
295 N A 0.0000
296 N A -2.5031
297 S A -1.8207
298 N A -1.4787
299 F A 0.0000
300 T A 0.0000
301 W A 0.1619
302 T A 0.0049
303 G A 0.0000
304 A A 0.0000
305 S A 0.0000
306 K A 0.0000
307 Y A 0.0000
308 N A 0.0000
309 L A 0.0000
310 N A -0.7207
311 G A -0.7465
312 R A 0.0000
313 E A -0.5367
314 S A 0.0000
315 I A 0.0000
316 I A 0.0000
317 N A 0.0000
318 P A 0.0000
319 G A 0.0000
320 T A 0.0000
321 A A -0.0739
322 M A 0.0000
323 A A 0.0000
324 S A 0.0000
325 H A 0.0000
326 K A -1.7930
327 D A -2.2360
328 D A -2.9375
329 E A -2.6124
330 D A -3.3678
331 K A -2.4016
332 F A -1.5089
333 F A 0.0000
334 P A 0.0000
335 M A 0.0000
336 S A 0.0000
337 G A 0.0000
338 V A 0.0000
339 M A 0.0000
340 I A 0.0000
341 F A 0.0000
342 G A -1.3637
343 K A -2.2985
344 E A -2.3071
345 S A -1.7094
346 A A 0.0000
347 G A -0.9166
348 A A -0.4823
349 S A -0.5430
350 N A -0.6893
351 T A 0.0000
352 A A -0.6491
353 L A -0.9115
354 D A -1.8915
355 N A -1.7428
356 V A 0.0000
357 M A 0.0000
358 I A -0.2195
359 T A 0.0000
360 D A -1.3805
361 E A 0.0000
362 E A -1.8383
363 E A -0.9846
364 I A 0.0000
365 K A -0.7632
366 A A 0.0000
367 T A 0.0000
368 N A 0.0000
369 P A 0.0000
370 V A 0.0000
371 A A 0.0000
372 T A 0.0000
373 E A -0.6291
374 R A -0.9175
375 F A 0.0000
376 G A 0.0000
377 T A 0.0000
378 V A 0.0000
379 A A 0.0000
380 V A -0.0745
381 N A -0.3641
382 F A -0.0295
383 Q A 0.0000
384 S A -1.0832
385 S A -1.3279
386 S A -0.9977
387 T A -1.1708
388 D A -2.0678
389 P A -0.9539
390 A A -0.3764
391 T A -0.3373
392 G A -0.8129
393 D A -1.6616
394 V A 0.0000
395 H A -0.6721
396 A A -0.2613
397 M A 0.0000
398 G A 0.0000
399 A A 0.0000
400 L A 0.0000
401 P A 0.0000
402 G A 0.0000
403 M A 0.0000
404 V A 0.0000
405 W A 0.0000
406 Q A 0.0000
407 D A -0.4360
408 R A 0.0000
409 D A 0.0000
410 V A 0.0000
411 Y A 0.0000
412 L A 0.0000
413 Q A 0.0000
414 G A 0.0000
415 P A 0.0000
416 I A 0.0000
417 W A 0.0000
418 A A 0.0000
419 K A 0.0000
420 I A 0.0000
421 P A 0.0000
422 H A -0.4581
423 T A -0.4036
424 D A -0.6216
425 G A 0.0000
426 H A -0.5107
427 F A 0.0000
428 H A -0.4584
429 P A -0.3525
430 S A -0.3255
431 P A 0.0000
432 L A 0.0000
433 M A 0.0000
434 G A 0.0000
435 G A -0.1359
436 F A 0.0000
437 G A -0.5217
438 L A 0.0000
439 K A -1.3113
440 N A -1.7166
441 P A 0.0000
442 P A 0.0000
443 P A 0.0000
444 Q A 0.0000
445 I A 0.0000
446 L A 0.0000
447 I A 0.0000
448 K A 0.0000
449 N A 0.0000
450 T A 0.1644
451 P A 0.1032
452 V A 0.4806
453 P A 0.1267
454 A A -0.2805
455 N A -1.3175
456 P A -0.8424
457 P A -0.8213
458 A A -0.7368
459 E A -1.0147
460 F A 0.8854
461 S A 0.0457
462 A A 0.0501
463 T A -0.4631
464 K A -1.3344
465 F A 0.0108
466 A A -0.0854
467 S A -0.2599
468 F A 0.2581
469 I A 0.4595
470 T A 0.1472
471 Q A 0.0000
472 Y A 0.3668
473 S A 0.0000
474 T A 0.0403
475 G A 0.0000
476 Q A -0.2946
477 V A 0.0000
478 S A 0.0000
479 V A 0.0000
480 E A -1.3753
481 I A 0.0000
482 E A -1.1627
483 W A 0.0000
484 E A -1.3641
485 L A 0.0000
486 Q A -1.9635
487 K A -2.5636
488 E A -2.3286
489 N A -1.9798
490 S A -1.1114
491 K A -0.2729
492 R A 0.0000
493 W A 1.1468
494 N A 0.0612
495 P A -0.3264
496 E A -0.3952
497 V A -0.1322
498 Q A -0.7350
499 Y A -0.5654
500 T A -0.5932
501 S A -0.4635
502 N A -0.8677
503 Y A 0.2949
504 A A -0.5855
505 K A -1.6208
506 S A -1.0824
507 A A -0.7806
508 N A -0.9655
509 V A 0.5047
510 D A -0.4037
511 F A -0.0726
512 T A 0.5306
513 V A 0.5144
514 D A -1.0137
515 N A -2.0524
516 N A -1.8129
517 G A -1.0043
518 L A -0.0762
519 Y A 0.0571
520 T A -0.2415
521 E A -0.9011
522 P A -0.8483
523 R A -0.9717
524 P A -0.5843
525 I A 0.0000
526 G A -0.2902
527 T A 0.0000
528 R A 0.0000
529 Y A -0.0492
530 L A 0.0000
531 T A 0.0000
532 R A -0.5879
533 P A 0.0000
534 L A 0.0000
17 D B -2.4483
18 G B -1.1794
19 V B 0.3956
20 G B -0.6120
21 N B -1.7218
22 A B -1.2892
23 S B 0.0000
24 G B -1.2878
25 N B -1.1091
26 W B -0.2875
27 H B -1.1808
28 C B -1.0033
29 D B -1.7967
30 S B -0.8205
31 T B -0.0880
32 W B 0.1135
33 L B 0.3193
34 G B -1.0821
35 D B -2.2178
36 R B -1.0658
37 V B 0.0000
38 I B -0.1944
39 T B 0.0000
40 T B 0.0000
41 S B 0.0000
42 T B 0.0000
43 R B 0.0000
44 T B 0.3725
45 W B 0.0000
46 A B 0.6479
47 L B 0.0000
48 P B 0.0864
49 T B -0.1748
50 Y B -0.0945
51 N B -0.4553
52 N B -0.8773
53 H B -0.1189
54 L B 0.5737
55 Y B 0.0851
56 K B -0.8649
57 Q B -1.1659
58 I B -0.3676
59 S B -0.4797
60 S B 0.0000
61 A B -0.3926
62 S B -0.3245
63 T B -0.4399
64 G B -0.7710
65 A B -0.8019
66 S B -1.0948
67 N B -1.7482
68 D B -1.1471
69 N B -0.9071
70 H B -1.0345
71 Y B -0.4281
72 F B 0.0000
73 G B 0.0000
74 Y B -0.3206
75 S B 0.0000
76 T B 0.0000
77 P B 0.0000
78 W B 0.0000
79 G B 0.0000
80 Y B 0.0000
81 F B 0.0000
82 D B 0.0000
83 F B 0.0000
84 N B 0.0000
85 R B -0.2302
86 F B 0.0000
87 H B 0.0000
88 C B 0.0000
89 H B 0.0000
90 F B 0.0000
91 S B -0.9733
92 P B -1.2478
93 R B -2.0808
94 D B -1.5723
95 W B 0.0000
96 Q B -1.8864
97 R B -2.2572
98 L B 0.0000
99 I B 0.0000
100 N B 0.0000
101 N B -1.8225
102 N B 0.0000
103 W B -0.9549
104 G B 0.0000
105 F B 0.0000
106 R B -0.8247
107 P B 0.0000
108 K B -1.8810
109 R B -2.4532
110 L B 0.0000
111 N B -1.5748
112 F B 0.0000
113 K B -0.9380
114 L B 0.0000
115 F B 0.0000
116 N B -1.0493
117 I B 0.0000
118 Q B -1.0035
119 V B 0.0000
120 K B -0.4873
121 E B -0.1500
122 V B 0.5687
123 T B 0.2812
124 T B -0.4426
125 N B -1.7713
126 D B -2.0946
127 G B -0.9361
128 V B 0.4932
129 T B 0.4711
130 T B 0.7936
131 I B 1.1773
132 A B 0.0474
133 N B -1.0873
134 N B -0.6257
135 L B 0.2602
136 T B -0.0234
137 S B 0.0000
138 T B -0.5137
139 V B 0.0000
140 Q B -0.4859
141 V B 0.0000
142 F B 0.0000
143 S B -0.4871
144 D B 0.0000
145 S B -1.1931
146 E B -2.1973
147 Y B -1.3623
148 Q B 0.0000
149 L B 0.0000
150 P B 0.0000
151 Y B 0.0000
152 V B 0.0000
153 L B 0.0000
154 G B -0.1424
155 S B -0.1659
156 A B 0.0000
157 H B 0.0000
158 Q B -0.6140
159 G B -0.1563
160 C B -0.0548
161 L B 0.0000
162 P B 0.0825
163 P B -0.0618
164 F B 0.6436
165 P B 0.0420
166 A B -0.1968
167 D B -0.6445
168 V B 1.1630
169 F B 0.0000
170 M B 1.2572
171 I B 0.0000
172 P B 0.0000
173 Q B 0.1308
174 Y B 0.0000
175 G B 0.0000
176 Y B 0.0000
177 L B 0.0000
178 T B 0.0000
179 L B 0.0000
180 N B 0.0000
181 N B -1.2483
182 G B -1.0988
183 S B -0.9967
184 Q B -1.2400
185 A B -0.5514
186 V B -0.1340
187 G B -0.3239
188 R B -0.2673
189 S B 0.0000
190 S B 0.0000
191 F B 0.3966
192 Y B 0.0000
193 C B 0.4452
194 L B 0.0000
195 E B -0.6498
196 Y B 0.8122
197 F B 0.0000
198 P B -0.4021
199 S B -0.6170
200 Q B -1.1200
201 M B -0.1954
202 L B 0.0000
203 R B -1.7123
204 T B -1.3161
205 G B 0.0000
206 N B -1.9867
207 N B -1.5272
208 F B -0.5131
209 T B -0.4188
210 F B -0.2231
211 S B -0.8548
212 Y B -0.9640
213 T B -1.5571
214 F B 0.0000
215 E B -2.1763
216 E B -2.1103
217 V B 0.0000
218 P B -0.5474
219 F B -0.0297
220 H B 0.0000
221 S B 0.0000
222 S B 0.0000
223 Y B 0.0000
224 A B 0.0000
225 H B 0.0000
226 S B 0.0000
227 Q B 0.0000
228 S B 0.0000
229 L B 0.0000
230 D B 0.0000
231 R B 0.0000
232 L B 0.1844
233 M B 0.0000
234 N B 0.0000
235 P B 0.0000
236 L B 0.4723
237 I B 0.0571
238 D B -0.5495
239 Q B 0.0000
240 Y B 0.0000
241 L B 0.0000
242 Y B 0.0000
243 Y B -0.0218
244 L B 0.0000
245 N B -0.5190
246 R B -0.9757
247 T B 0.0000
248 Q B -2.0763
249 N B -2.1002
250 Q B -2.1730
251 S B -1.4699
252 G B -1.2800
253 S B -1.0686
254 A B -1.4244
255 Q B -2.5483
256 N B -2.6872
257 K B -2.3113
258 D B -1.7927
259 L B 0.0000
260 L B -0.5100
261 F B 0.0000
262 S B 0.0000
263 R B -0.6068
264 G B 0.0000
265 S B -0.2615
266 P B -0.0541
267 A B -0.1311
268 G B -0.1804
269 M B 0.0000
270 S B 0.0000
271 V B 0.0758
272 Q B 0.0000
273 P B 0.0000
274 K B -0.1202
275 N B 0.0000
276 W B 0.0000
277 L B 0.0000
278 P B 0.0000
279 G B 0.0000
280 P B 0.0000
281 C B 0.0000
282 Y B 0.0000
283 R B 0.0000
284 Q B 0.0000
285 Q B 0.0000
286 R B -0.1230
287 V B 0.0000
288 S B 0.0000
289 K B -1.4226
290 T B -1.1296
291 K B -1.7735
292 T B -1.3574
293 D B -1.4322
294 N B 0.0000
295 N B 0.0000
296 N B -2.5436
297 S B -1.8113
298 N B -1.4420
299 F B 0.0000
300 T B 0.0000
301 W B 0.1656
302 T B 0.0100
303 G B 0.0000
304 A B 0.0000
305 S B 0.0000
306 K B 0.0000
307 Y B 0.0000
308 N B 0.0000
309 L B 0.0000
310 N B -0.7259
311 G B -0.7693
312 R B 0.0000
313 E B -0.5238
314 S B 0.0000
315 I B 0.0000
316 I B 0.0000
317 N B 0.0000
318 P B 0.0000
319 G B 0.0000
320 T B 0.0000
321 A B -0.0736
322 M B 0.0000
323 A B 0.0000
324 S B 0.0000
325 H B 0.0000
326 K B -1.6376
327 D B -2.0993
328 D B -2.9379
329 E B -2.6840
330 D B -3.3596
331 K B -2.4150
332 F B -1.4334
333 F B 0.0000
334 P B 0.0000
335 M B 0.0000
336 S B 0.0000
337 G B 0.0000
338 V B 0.0000
339 M B 0.0000
340 I B 0.0000
341 F B 0.0000
342 G B -1.3562
343 K B -2.2991
344 E B -2.3017
345 S B -1.7087
346 A B 0.0000
347 G B -0.9208
348 A B -0.5078
349 S B -0.5589
350 N B -0.7312
351 T B 0.0000
352 A B -0.6555
353 L B -0.8641
354 D B -1.8788
355 N B -1.7310
356 V B 0.0000
357 M B 0.0000
358 I B -0.1963
359 T B 0.0000
360 D B -1.4122
361 E B 0.0000
362 E B -1.6270
363 E B -0.9470
364 I B 0.0000
365 K B 0.0000
366 A B 0.0000
367 T B 0.0000
368 N B 0.0000
369 P B 0.0000
370 V B 0.0000
371 A B 0.0000
372 T B 0.0000
373 E B -0.5498
374 R B -0.7718
375 F B 0.0000
376 G B 0.0000
377 T B 0.0000
378 V B 0.0000
379 A B 0.0000
380 V B -0.1021
381 N B -0.3828
382 F B 0.0556
383 Q B 0.0000
384 S B -0.9564
385 S B -1.1811
386 S B -0.9233
387 T B -1.1128
388 D B -1.9988
389 P B -0.9406
390 A B -0.3619
391 T B -0.2445
392 G B -0.6107
393 D B -1.2494
394 V B 0.0000
395 H B -0.5517
396 A B -0.2104
397 M B 0.0000
398 G B 0.0000
399 A B 0.0000
400 L B 0.0000
401 P B 0.0000
402 G B 0.0000
403 M B 0.0000
404 V B 0.0000
405 W B 0.0000
406 Q B 0.0000
407 D B -0.4509
408 R B 0.0000
409 D B 0.0000
410 V B 0.0000
411 Y B 0.0000
412 L B 0.0000
413 Q B 0.0000
414 G B 0.0000
415 P B 0.0000
416 I B 0.0000
417 W B 0.0000
418 A B 0.0000
419 K B -1.0970
420 I B 0.0000
421 P B 0.0000
422 H B -1.2440
423 T B -0.7272
424 D B -0.7916
425 G B 0.0000
426 H B -0.7390
427 F B 0.0000
428 H B -0.4959
429 P B -0.5296
430 S B -0.3648
431 P B 0.0000
432 L B 0.0000
433 M B 0.0000
434 G B 0.0000
435 G B -0.1252
436 F B 0.0000
437 G B -0.8004
438 L B 0.0000
439 K B -2.5758
440 N B -2.4870
441 P B 0.0000
442 P B 0.0000
443 P B 0.0000
444 Q B 0.0000
445 I B 0.0000
446 L B 0.0000
447 I B 0.0000
448 K B 0.0000
449 N B 0.0000
450 T B 0.1751
451 P B 0.1183
452 V B 0.4278
453 P B 0.1425
454 A B -0.2685
455 N B -1.3110
456 P B -0.8418
457 P B -0.8105
458 A B -0.7287
459 E B -1.0009
460 F B 0.9107
461 S B 0.0892
462 A B 0.0693
463 T B -0.4596
464 K B -1.3522
465 F B -0.0686
466 A B -0.0766
467 S B -0.2508
468 F B 0.2941
469 I B 0.4840
470 T B 0.1483
471 Q B 0.0000
472 Y B 0.3415
473 S B 0.0000
474 T B 0.0186
475 G B 0.0000
476 Q B -0.3151
477 V B 0.0000
478 S B -0.6932
479 V B 0.0000
480 E B -1.3906
481 I B 0.0000
482 E B -1.1264
483 W B 0.0000
484 E B -1.3084
485 L B 0.0000
486 Q B -1.9407
487 K B -2.5663
488 E B -2.3187
489 N B -2.0261
490 S B -1.3129
491 K B -0.6363
492 R B -0.0321
493 W B 0.8831
494 N B 0.0137
495 P B -0.3373
496 E B -0.3857
497 V B -0.0474
498 Q B -0.6702
499 Y B -0.5009
500 T B -0.3735
501 S B -0.4312
502 N B -0.8308
503 Y B 0.3065
504 A B -0.5783
505 K B -1.6200
506 S B -1.0647
507 A B -0.7691
508 N B -0.9714
509 V B 0.5096
510 D B -0.3854
511 F B 0.0000
512 T B 0.4630
513 V B 0.4821
514 D B -1.0553
515 N B -2.0656
516 N B -1.8204
517 G B -1.0393
518 L B -0.0997
519 Y B 0.0099
520 T B -0.2803
521 E B -0.9557
522 P B -0.8756
523 R B -1.0019
524 P B -0.5969
525 I B 0.0000
526 G B -0.2670
527 T B 0.0000
528 R B 0.0000
529 Y B -0.0534
530 L B 0.0000
531 T B 0.0000
532 R B -0.6730
533 P B 0.0000
534 L B 0.0000
17 D C -2.5931
18 G C -1.3632
19 V C 0.3146
20 G C -0.6791
21 N C -1.7966
22 A C -1.3536
23 S C 0.0000
24 G C -1.3921
25 N C -1.1267
26 W C -0.3156
27 H C -1.1975
28 C C -1.0175
29 D C -1.8024
30 S C -0.8244
31 T C -0.0930
32 W C 0.1110
33 L C 0.3313
34 G C -1.0635
35 D C -2.1878
36 R C -1.1404
37 V C 0.0000
38 I C -0.1868
39 T C 0.0000
40 T C 0.0000
41 S C 0.0000
42 T C 0.0000
43 R C 0.0000
44 T C 0.4342
45 W C 0.0000
46 A C 0.6429
47 L C 0.0000
48 P C 0.0668
49 T C -0.2136
50 Y C -0.1723
51 N C -0.6779
52 N C -0.9681
53 H C -0.2450
54 L C 0.3410
55 Y C -0.1714
56 K C -1.2886
57 Q C -1.3534
58 I C -0.4354
59 S C -0.4996
60 S C 0.0000
61 A C -0.3898
62 S C -0.3210
63 T C -0.4399
64 G C -0.7725
65 A C -0.8044
66 S C -1.0990
67 N C -1.7464
68 D C -1.1356
69 N C -0.9053
70 H C -1.0383
71 Y C -0.4269
72 F C 0.0000
73 G C 0.0000
74 Y C -0.4183
75 S C 0.0000
76 T C 0.0000
77 P C 0.0000
78 W C 0.0000
79 G C 0.0000
80 Y C 0.0000
81 F C 0.0000
82 D C 0.0000
83 F C 0.0000
84 N C 0.0000
85 R C -0.2275
86 F C 0.0000
87 H C 0.0000
88 C C 0.0000
89 H C 0.0000
90 F C 0.0000
91 S C -1.0936
92 P C -1.4888
93 R C -2.5237
94 D C -1.7902
95 W C 0.0000
96 Q C -2.0841
97 R C -2.4261
98 L C 0.0000
99 I C 0.0000
100 N C 0.0000
101 N C -1.8352
102 N C 0.0000
103 W C 0.0000
104 G C 0.0000
105 F C 0.0000
106 R C -0.8131
107 P C 0.0000
108 K C -1.7243
109 R C -2.0877
110 L C 0.0000
111 N C -1.3904
112 F C 0.0000
113 K C -1.2054
114 L C 0.0000
115 F C 0.0000
116 N C -1.2904
117 I C 0.0000
118 Q C -0.9600
119 V C 0.0000
120 K C -0.4314
121 E C -0.0696
122 V C 0.6278
123 T C 0.3173
124 T C -0.4287
125 N C -1.7724
126 D C -2.0939
127 G C -0.9334
128 V C 0.4950
129 T C 0.4985
130 T C 0.8548
131 I C 1.2963
132 A C 0.1086
133 N C -1.0557
134 N C -0.6150
135 L C 0.2944
136 T C -0.0040
137 S C 0.0000
138 T C -0.4884
139 V C 0.0000
140 Q C -0.4494
141 V C 0.0000
142 F C 0.0000
143 S C -0.4800
144 D C 0.0000
145 S C -1.2133
146 E C -2.2484
147 Y C -1.4382
148 Q C -1.0476
149 L C 0.0000
150 P C 0.0000
151 Y C 0.0000
152 V C 0.0000
153 L C 0.0000
154 G C -0.1352
155 S C -0.1370
156 A C 0.0000
157 H C 0.0000
158 Q C -0.4608
159 G C -0.0860
160 C C -0.0211
161 L C 0.0000
162 P C 0.1558
163 P C -0.0358
164 F C 0.6720
165 P C 0.1160
166 A C -0.0540
167 D C -0.3195
168 V C 1.3187
169 F C 0.0000
170 M C 1.2382
171 I C 0.0000
172 P C 0.0000
173 Q C 0.1154
174 Y C 0.0000
175 G C 0.0000
176 Y C 0.0000
177 L C 0.0000
178 T C 0.0000
179 L C 0.0000
180 N C 0.0000
181 N C -1.2310
182 G C -1.0992
183 S C -0.9990
184 Q C -1.2445
185 A C -0.5612
186 V C -0.1514
187 G C -0.3093
188 R C -0.3008
189 S C 0.0000
190 S C 0.0000
191 F C 0.2203
192 Y C 0.0000
193 C C 0.3831
194 L C 0.0000
195 E C -0.4852
196 Y C 0.8098
197 F C 0.0000
198 P C -0.3606
199 S C -0.5683
200 Q C -1.1272
201 M C -0.2327
202 L C 0.0000
203 R C -1.6940
204 T C -1.3470
205 G C -1.7156
206 N C -2.1321
207 N C -1.8401
208 F C 0.0000
209 T C -0.6065
210 F C -0.2709
211 S C -0.7579
212 Y C -0.8209
213 T C -1.3887
214 F C 0.0000
215 E C -2.1422
216 E C -2.1280
217 V C 0.0000
218 P C -0.5824
219 F C -0.1009
220 H C 0.0000
221 S C 0.0000
222 S C 0.0000
223 Y C 0.0000
224 A C 0.0000
225 H C 0.0000
226 S C 0.0000
227 Q C 0.0000
228 S C 0.0000
229 L C 0.0000
230 D C 0.0000
231 R C 0.0000
232 L C 0.1891
233 M C 0.0000
234 N C 0.0000
235 P C 0.0000
236 L C 0.4861
237 I C 0.0781
238 D C -0.4997
239 Q C 0.0000
240 Y C 0.0000
241 L C 0.0000
242 Y C 0.0000
243 Y C -0.0218
244 L C 0.0000
245 N C -0.5160
246 R C -0.9700
247 T C 0.0000
248 Q C -2.2434
249 N C -2.1863
250 Q C -2.1985
251 S C -1.4889
252 G C -1.2896
253 S C -1.0779
254 A C -1.4472
255 Q C -2.6836
256 N C -2.8942
257 K C -2.4185
258 D C -1.8959
259 L C 0.0000
260 L C -0.5073
261 F C 0.0000
262 S C 0.0000
263 R C -0.6053
264 G C 0.0000
265 S C -0.2503
266 P C -0.0414
267 A C -0.1245
268 G C -0.1900
269 M C 0.0000
270 S C 0.0000
271 V C 0.0639
272 Q C 0.0000
273 P C 0.0000
274 K C -0.1295
275 N C 0.0000
276 W C 0.0000
277 L C 0.0000
278 P C 0.0000
279 G C 0.0000
280 P C 0.0000
281 C C 0.0000
282 Y C 0.0000
283 R C 0.0000
284 Q C 0.0000
285 Q C 0.0000
286 R C -0.1215
287 V C 0.0000
288 S C 0.0000
289 K C -1.4627
290 T C -1.1701
291 K C -1.7057
292 T C -1.2417
293 D C -1.2302
294 N C 0.0000
295 N C 0.0000
296 N C -2.1338
297 S C -1.6234
298 N C -1.3887
299 F C 0.0000
300 T C 0.0000
301 W C 0.1465
302 T C -0.0037
303 G C 0.0000
304 A C 0.0000
305 S C 0.0000
306 K C 0.0000
307 Y C 0.0000
308 N C 0.0000
309 L C 0.0000
310 N C -0.5938
311 G C -0.6950
312 R C 0.0000
313 E C -0.4987
314 S C 0.0000
315 I C 0.0000
316 I C 0.0000
317 N C 0.0000
318 P C 0.0000
319 G C 0.0000
320 T C 0.0000
321 A C -0.0745
322 M C 0.0000
323 A C 0.0000
324 S C 0.0000
325 H C 0.0000
326 K C -1.7189
327 D C -2.1829
328 D C -2.9480
329 E C -2.6472
330 D C -3.3222
331 K C -2.3836
332 F C -1.5557
333 F C 0.0000
334 P C 0.0000
335 M C 0.0000
336 S C 0.0000
337 G C 0.0000
338 V C 0.0000
339 M C 0.0000
340 I C 0.0000
341 F C 0.0000
342 G C -1.3720
343 K C -2.3158
344 E C -2.3076
345 S C -1.7131
346 A C 0.0000
347 G C -0.9215
348 A C -0.4916
349 S C -0.5454
350 N C -0.6950
351 T C 0.0000
352 A C -0.6495
353 L C -0.8808
354 D C -1.8855
355 N C -1.7079
356 V C 0.0000
357 M C 0.0000
358 I C -0.2381
359 T C 0.0000
360 D C -1.2446
361 E C 0.0000
362 E C -1.4793
363 E C -0.8046
364 I C 0.0000
365 K C -0.6527
366 A C 0.0000
367 T C 0.0000
368 N C 0.0000
369 P C 0.0000
370 V C 0.0000
371 A C 0.0000
372 T C 0.0000
373 E C -0.6076
374 R C -0.9326
375 F C 0.0000
376 G C 0.0000
377 T C 0.0000
378 V C 0.0000
379 A C 0.0000
380 V C -0.1302
381 N C -0.3217
382 F C 0.1331
383 Q C 0.0000
384 S C -0.9712
385 S C -1.2390
386 S C -0.9643
387 T C -1.1301
388 D C -2.0334
389 P C -0.9147
390 A C -0.3470
391 T C -0.3881
392 G C -0.9251
393 D C -1.8945
394 V C 0.0000
395 H C -0.6955
396 A C -0.2751
397 M C 0.0000
398 G C 0.0000
399 A C 0.0000
400 L C 0.0000
401 P C 0.0000
402 G C 0.0000
403 M C 0.0000
404 V C 0.0000
405 W C 0.0000
406 Q C 0.0000
407 D C -0.4264
408 R C 0.0000
409 D C 0.0000
410 V C 0.0000
411 Y C 0.0000
412 L C 0.0000
413 Q C 0.0000
414 G C 0.0000
415 P C 0.0000
416 I C 0.0000
417 W C 0.0000
418 A C 0.0000
419 K C -1.0607
420 I C 0.0000
421 P C 0.0000
422 H C -1.1776
423 T C -0.7150
424 D C -0.8138
425 G C 0.0000
426 H C -0.7542
427 F C 0.0000
428 H C -0.4889
429 P C -0.5410
430 S C -0.3607
431 P C 0.0000
432 L C 0.0000
433 M C 0.0000
434 G C 0.0000
435 G C -0.1317
436 F C 0.0000
437 G C -0.7986
438 L C 0.0000
439 K C -2.5520
440 N C -2.4721
441 P C 0.0000
442 P C 0.0000
443 P C 0.0000
444 Q C 0.0000
445 I C 0.0000
446 L C 0.0000
447 I C 0.0000
448 K C 0.0000
449 N C 0.0000
450 T C 0.1669
451 P C 0.1040
452 V C 0.3937
453 P C 0.1221
454 A C -0.2861
455 N C -1.3171
456 P C -0.8438
457 P C -0.8208
458 A C -0.7374
459 E C -1.0136
460 F C 0.8850
461 S C 0.0422
462 A C 0.0469
463 T C -0.4693
464 K C -1.3460
465 F C -0.0494
466 A C -0.0799
467 S C -0.2628
468 F C 0.2549
469 I C 0.4550
470 T C 0.1445
471 Q C 0.0000
472 Y C 0.3604
473 S C 0.0000
474 T C 0.0240
475 G C 0.0000
476 Q C -0.3766
477 V C 0.0000
478 S C 0.0000
479 V C 0.0000
480 E C -1.3212
481 I C 0.0000
482 E C -1.0330
483 W C 0.0000
484 E C -1.2632
485 L C 0.0000
486 Q C -1.8767
487 K C -2.5542
488 E C -2.2593
489 N C -1.8886
490 S C -1.1217
491 K C -0.2822
492 R C 0.0000
493 W C 1.1426
494 N C 0.0581
495 P C -0.3218
496 E C -0.3598
497 V C -0.0606
498 Q C -0.6809
499 Y C -0.5314
500 T C -0.6009
501 S C -0.5685
502 N C -0.9154
503 Y C 0.2887
504 A C -0.5901
505 K C -1.6211
506 S C -1.1161
507 A C -0.8082
508 N C -1.0603
509 V C 0.3217
510 D C -0.7850
511 F C 0.0000
512 T C 0.3441
513 V C 0.4326
514 D C -1.0660
515 N C -2.0515
516 N C -1.8129
517 G C -0.9981
518 L C -0.0715
519 Y C -0.0134
520 T C -0.3673
521 E C -1.0512
522 P C -0.9925
523 R C -1.1149
524 P C -0.6205
525 I C 0.0000
526 G C -0.2928
527 T C 0.0000
528 R C 0.0000
529 Y C -0.0250
530 L C 0.0000
531 T C 0.0000
532 R C -0.7039
533 P C -0.2128
534 L C 0.0000
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Calculations for various pH values

This page contains details and comparisons for all models calculated at different pH points.

pH
Average A3D Score
Max A3D Score
4.0 -0.1647 4.3975 View CSV PDB
4.5 -0.2015 4.2935 View CSV PDB
5.0 -0.2448 4.1241 View CSV PDB
5.5 -0.2887 3.9744 View CSV PDB
6.0 -0.3273 3.9736 View CSV PDB
6.5 -0.3563 3.982 View CSV PDB
7.0 -0.3757 3.9981 View CSV PDB
7.5 -0.3884 4.0185 View CSV PDB
8.0 -0.3965 4.0405 View CSV PDB
8.5 -0.3994 4.0628 View CSV PDB
9.0 -0.3956 4.0843 View CSV PDB