Tomuzotuximab / 6arp

A4DAB272_6arp_B_A | Source PDB: 6arp | Chains: B, A | Done
97.79
Yes
10 Å
Yes
Avg A4D Score
-0.7263
Max Score
2.1792
Min Score
-3.7306
Total Score
-310.11
Score CDR
-0.5068
Score non-CDR
-0.7528

Calculation Parameters

Chain Sequence(s) QVQLKQSGPGLVQPSQSLSITCTVSGFDLTDYGVHWVRQSPGKGLEWLGVIWSGGNTDYNTPFTSRLSINKDNSKSQVFFKMNSLQSNDTAIYYCARALTYYDYEFAYWGQGTLVTVSAASTKGPSVFPLAPGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSDILLTQSPVILSVSPGERVSFSCRASQSIGTNIHWYQQRTNGSPRLLIKYADESIDGIPSRFSGSGSGTDFTLSINSVESEDIADYYCQQNNNWPTTFGAGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE input.pdb
Selected Chain(s) B (Heavy), A (Light)
Distance of Aggregation 10 Å
FoldX Energy Minimization Yes
pH Calculations Yes
Downloads Download all data (.tar.gz)

Aggrescan4D Profile

Aggregation-prone (score > 0)
Soluble (score < 0)
Buried (score = 0)

Per-Residue A4D Scores

Download CSV
Minimum Score -3.7306
Maximum Score 2.1792
Average Score -0.7263
Total Score -310.1138

Residues with A4D score > 0.0 are highlighted as aggregation-prone.

Index Residue Chain A4D Score Classification
1 Q B -1.4637 Soluble
2 V B -1.0797 Soluble
3 Q B -1.5692 Soluble
4 L B 0.0000 Buried
5 K B -1.9721 Soluble
6 Q B 0.0000 Buried
7 S B -0.7054 Soluble
8 G B -1.0090 Soluble
9 P B -0.5082 Soluble
11 G B -0.4382 Soluble
12 L B -0.0069 Soluble
13 V B -0.6642 Soluble
14 Q B -1.2700 Soluble
15 P B -1.4893 Soluble
16 S B -1.5131 Soluble
17 Q B -1.9440 Soluble
18 S B -1.5635 Soluble
19 L B 0.0000 Buried
20 S B -0.5437 Soluble
21 I B 0.0000 Buried
22 T B -0.3957 Soluble
23 C B 0.0000 Buried
24 T B -1.0530 Soluble
25 V B 0.0000 Buried
26 S B -1.4647 Soluble
27 G B -1.3285 Soluble
28 F B -1.4786 Soluble
29 D B -2.6462 Soluble
30 L B 0.0000 Buried
35 T B -1.6913 Soluble
36 D B -1.8999 Soluble
37 Y B -0.2112 Soluble
38 G B 0.0000 Buried
39 V B 0.0000 Buried
40 H B 0.0000 Buried
41 W B 0.0000 Buried
42 V B 0.0000 Buried
43 R B -0.4508 Soluble
44 Q B -0.7636 Soluble
45 S B -1.1341 Soluble
46 P B -1.1220 Soluble
47 G B -1.4641 Soluble
48 K B -2.1878 Soluble
49 G B -1.2184 Soluble
50 L B 0.0000 Buried
51 E B -0.8809 Soluble
52 W B 0.0000 Buried
53 L B 0.0000 Buried
54 G B 0.0000 Buried
55 V B 0.0000 Buried
56 I B 0.0000 Buried
57 W B -0.6059 Soluble
58 S B -0.9849 Soluble
59 G B -1.2926 Soluble
63 G B -1.5182 Soluble
64 N B -1.8417 Soluble
65 T B -1.3002 Soluble
66 D B -1.0271 Soluble
67 Y B -0.4242 Soluble
68 N B -0.2833 Soluble
69 T B -0.3530 Soluble
70 P B -0.3940 Soluble
71 F B 0.0000 Buried
72 T B -0.4766 Soluble
74 S B -0.5447 Soluble
75 R B -0.9048 Soluble
76 L B 0.0000 Buried
77 S B -0.9265 Soluble
78 I B 0.0000 Buried
79 N B -1.7004 Soluble
80 K B -1.4688 Soluble
81 D B -1.8571 Soluble
82 N B -2.4622 Soluble
83 S B -1.8473 Soluble
84 K B -2.5281 Soluble
85 S B -1.9269 Soluble
86 Q B -1.4611 Soluble
87 V B 0.0000 Buried
88 F B -0.1572 Soluble
89 F B 0.0000 Buried
90 K B -1.2878 Soluble
91 M B 0.0000 Buried
92 N B -1.6204 Soluble
93 S B -1.4289 Soluble
94 L B 0.0000 Buried
95 Q B -2.0272 Soluble
96 S B -1.4607 Soluble
97 N B -1.7603 Soluble
98 D B 0.0000 Buried
99 T B -0.5622 Soluble
100 A B 0.0000 Buried
101 I B 0.4420 Aggregation-prone
102 Y B 0.0000 Buried
103 Y B 0.0000 Buried
104 C B 0.0000 Buried
105 A B 0.0000 Buried
106 R B 0.0000 Buried
107 A B 0.0000 Buried
108 L B 1.0801 Aggregation-prone
109 T B 1.1209 Aggregation-prone
110 Y B 1.7264 Aggregation-prone
111 Y B 1.9085 Aggregation-prone
112 D B 0.0000 Buried
113 Y B 0.6231 Aggregation-prone
114 E B 0.0000 Buried
115 F B 0.0000 Buried
116 A B 0.0674 Aggregation-prone
117 Y B 0.0816 Aggregation-prone
118 W B -0.4954 Soluble
119 G B 0.0000 Buried
120 Q B -1.7311 Soluble
121 G B -0.8412 Soluble
122 T B 0.0000 Buried
123 L B 0.1325 Aggregation-prone
124 V B 0.0000 Buried
125 T B -0.2936 Soluble
126 V B 0.0000 Buried
127 S B -0.5781 Soluble
128 A B -0.2422 Soluble
129 A B -0.2957 Soluble
130 S B -0.5407 Soluble
131 T B -0.7382 Soluble
132 K B -1.5215 Soluble
133 G B -1.6631 Soluble
134 P B -0.8065 Soluble
135 S B -0.5284 Soluble
136 V B 0.0000 Buried
137 F B 0.0000 Buried
138 P B -1.3433 Soluble
139 L B 0.0000 Buried
140 A B -0.9854 Soluble
141 P B -0.7688 Soluble
142 G B -0.6331 Soluble
143 T B -0.4793 Soluble
144 A B -0.2459 Soluble
145 A B 0.0000 Buried
146 L B 0.0000 Buried
147 G B 0.0000 Buried
148 C B 0.0000 Buried
149 L B 0.0000 Buried
150 V B 0.0000 Buried
151 K B 0.0000 Buried
152 D B -0.6354 Soluble
153 Y B 0.0000 Buried
154 F B 0.0000 Buried
155 P B 0.0000 Buried
156 E B -0.5636 Soluble
157 P B -0.7688 Soluble
158 V B -0.8405 Soluble
159 T B -0.7559 Soluble
160 V B -0.4297 Soluble
161 S B -0.4351 Soluble
162 W B 0.0000 Buried
163 N B -0.7479 Soluble
164 S B -0.6412 Soluble
165 G B -0.5369 Soluble
166 A B -0.2402 Soluble
167 L B -0.0098 Soluble
168 T B -0.1666 Soluble
169 S B -0.1802 Soluble
170 G B -0.2133 Soluble
171 V B 0.1702 Aggregation-prone
172 H B -0.2582 Soluble
173 T B 0.0518 Aggregation-prone
174 F B 0.0000 Buried
175 P B -0.2099 Soluble
176 A B 0.2208 Aggregation-prone
177 V B 0.4746 Aggregation-prone
178 L B 1.1267 Aggregation-prone
179 Q B 0.2256 Aggregation-prone
180 S B -0.0754 Soluble
181 S B -0.2594 Soluble
182 G B -0.0271 Soluble
183 L B -0.0518 Soluble
184 Y B 0.3069 Aggregation-prone
185 S B 0.0000 Buried
186 L B 0.0000 Buried
187 S B 0.0000 Buried
188 S B 0.0000 Buried
189 V B 0.0000 Buried
190 V B 0.0000 Buried
191 T B -0.1279 Soluble
192 V B 0.0000 Buried
193 P B -0.5718 Soluble
194 S B -0.4825 Soluble
195 S B -0.5952 Soluble
196 S B -0.5862 Soluble
197 L B -0.8307 Soluble
198 G B -0.9734 Soluble
199 T B -0.7069 Soluble
200 Q B -1.1921 Soluble
201 T B -1.1250 Soluble
202 Y B 0.0000 Buried
203 I B -1.3180 Soluble
204 C B 0.0000 Buried
205 N B -1.4524 Soluble
206 V B 0.0000 Buried
207 N B -2.4334 Soluble
208 H B 0.0000 Buried
209 K B -2.9570 Soluble
210 P B -1.7324 Soluble
211 S B -1.9549 Soluble
212 N B -2.7290 Soluble
213 T B -2.2498 Soluble
214 K B -2.8115 Soluble
215 V B -1.4975 Soluble
216 D B -2.1862 Soluble
217 K B -2.0222 Soluble
218 K B -2.4535 Soluble
219 V B 0.0000 Buried
220 E B -2.7875 Soluble
221 P B -1.9144 Soluble
222 K B -2.5276 Soluble
223 S B -1.3029 Soluble
1 D A -1.4319 Soluble
2 I A 0.0000 Buried
3 L A 0.7738 Aggregation-prone
4 L A 0.0000 Buried
5 T A -0.0496 Soluble
6 Q A 0.1589 Aggregation-prone
7 S A 0.4333 Aggregation-prone
8 P A 1.0444 Aggregation-prone
9 V A 2.1792 Aggregation-prone
10 I A 2.0294 Aggregation-prone
11 L A 0.9344 Aggregation-prone
12 S A 0.1392 Aggregation-prone
13 V A -0.8344 Soluble
14 S A -1.6354 Soluble
15 P A -1.9698 Soluble
16 G A -2.1135 Soluble
17 E A -2.9377 Soluble
18 R A -3.1148 Soluble
19 V A 0.0000 Buried
20 S A -0.9343 Soluble
21 F A 0.0000 Buried
22 S A -0.5868 Soluble
23 C A 0.0000 Buried
24 R A -1.5268 Soluble
25 A A 0.0000 Buried
26 S A -0.8155 Soluble
27 Q A -1.5632 Soluble
28 S A -1.4362 Soluble
29 I A 0.0000 Buried
36 G A -1.0383 Soluble
37 T A -1.0338 Soluble
38 N A -0.9403 Soluble
39 I A 0.0000 Buried
40 H A 0.0000 Buried
41 W A 0.0000 Buried
42 Y A 0.0000 Buried
43 Q A 0.0000 Buried
44 Q A -1.0841 Soluble
45 R A -1.7186 Soluble
46 T A -1.4799 Soluble
47 N A -1.8829 Soluble
48 G A -1.4028 Soluble
49 S A -0.9271 Soluble
50 P A 0.0000 Buried
51 R A -0.6375 Soluble
52 L A 0.0000 Buried
53 L A 0.0000 Buried
54 I A 0.0000 Buried
55 K A -1.1049 Soluble
56 Y A -1.0076 Soluble
57 A A 0.0000 Buried
65 D A -2.8381 Soluble
66 E A -2.7234 Soluble
67 S A -1.9109 Soluble
68 I A -1.4409 Soluble
69 D A -1.9220 Soluble
70 G A -1.2434 Soluble
71 I A -0.7252 Soluble
72 P A -0.5439 Soluble
74 S A -0.7218 Soluble
75 R A -1.0606 Soluble
76 F A 0.0000 Buried
77 S A -1.3215 Soluble
78 G A -1.4211 Soluble
79 S A -1.4390 Soluble
80 G A -1.3468 Soluble
83 S A -1.1759 Soluble
84 G A -1.2620 Soluble
85 T A -1.7250 Soluble
86 D A -2.4711 Soluble
87 F A 0.0000 Buried
88 T A -1.0153 Soluble
89 L A 0.0000 Buried
90 S A -0.9236 Soluble
91 I A 0.0000 Buried
92 N A -2.3658 Soluble
93 S A -2.2439 Soluble
94 V A 0.0000 Buried
95 E A -2.1986 Soluble
96 S A -2.1859 Soluble
97 E A -2.2304 Soluble
98 D A 0.0000 Buried
99 I A -1.3570 Soluble
100 A A 0.0000 Buried
101 D A -0.5226 Soluble
102 Y A 0.0000 Buried
103 Y A 0.0000 Buried
104 C A 0.0000 Buried
105 Q A 0.0000 Buried
106 Q A 0.0000 Buried
107 N A -0.6143 Soluble
108 N A -1.2789 Soluble
109 N A -1.0644 Soluble
114 W A 0.1247 Aggregation-prone
115 P A -0.2888 Soluble
116 T A 0.0000 Buried
117 T A -0.1422 Soluble
118 F A 0.2590 Aggregation-prone
119 G A 0.0000 Buried
120 A A -0.2416 Soluble
121 G A -0.1524 Soluble
122 T A 0.0000 Buried
123 K A -0.3284 Soluble
124 L A 0.0000 Buried
125 E A -0.5942 Soluble
126 L A 0.0000 Buried
127 K A -1.4011 Soluble
128 R A -1.1280 Soluble
129 T A -0.1146 Soluble
130 V A 0.3500 Aggregation-prone
131 A A -0.0368 Soluble
132 A A -0.1109 Soluble
133 P A 0.0000 Buried
134 S A -0.1490 Soluble
135 V A 0.0000 Buried
136 F A 0.0744 Aggregation-prone
137 I A 0.0174 Aggregation-prone
138 F A 0.0000 Buried
139 P A -0.4941 Soluble
140 P A -0.8210 Soluble
141 S A 0.0000 Buried
142 D A -3.2248 Soluble
143 E A -3.2213 Soluble
144 Q A 0.0000 Buried
145 L A -2.3343 Soluble
146 K A -2.8422 Soluble
147 S A -1.7368 Soluble
148 G A -1.1807 Soluble
149 T A -0.9927 Soluble
150 A A 0.0000 Buried
151 S A 0.0000 Buried
152 V A 0.0000 Buried
153 V A 0.0000 Buried
154 C A 0.0000 Buried
155 L A 0.0000 Buried
156 L A 0.0000 Buried
157 N A 0.0000 Buried
158 N A -0.9106 Soluble
159 F A 0.0000 Buried
160 Y A -1.0956 Soluble
161 P A -1.6430 Soluble
162 R A -2.9071 Soluble
163 E A -3.1002 Soluble
164 A A -2.1830 Soluble
165 K A -2.1748 Soluble
166 V A -1.0059 Soluble
167 Q A -0.7613 Soluble
168 W A 0.0000 Buried
169 K A -0.7494 Soluble
170 V A 0.0000 Buried
171 D A -1.5160 Soluble
172 N A -1.4297 Soluble
173 A A -0.3579 Soluble
174 L A 0.2708 Aggregation-prone
175 Q A -0.5780 Soluble
176 S A -0.7708 Soluble
177 G A -1.3155 Soluble
178 N A -1.6693 Soluble
179 S A -1.5155 Soluble
180 Q A -1.5038 Soluble
181 E A -1.5824 Soluble
182 S A -0.7555 Soluble
183 V A -0.6878 Soluble
184 T A 0.0000 Buried
185 E A -1.9154 Soluble
186 Q A 0.0000 Buried
187 D A -1.9434 Soluble
188 S A -2.2632 Soluble
189 K A -2.6569 Soluble
190 D A -1.9369 Soluble
191 S A 0.0000 Buried
192 T A 0.0000 Buried
193 Y A 0.0000 Buried
194 S A 0.0000 Buried
195 L A 0.0000 Buried
196 S A 0.0000 Buried
197 S A 0.0000 Buried
198 T A -0.7238 Soluble
199 L A 0.0000 Buried
200 T A -0.6848 Soluble
201 L A -0.8634 Soluble
202 S A -1.0558 Soluble
203 K A -2.0571 Soluble
204 A A -1.9525 Soluble
205 D A -2.6769 Soluble
206 Y A 0.0000 Buried
207 E A -3.7306 Soluble
208 K A -3.7136 Soluble
209 H A -2.9331 Soluble
210 K A -3.0646 Soluble
211 V A -1.0411 Soluble
212 Y A 0.0000 Buried
213 A A 0.0000 Buried
214 C A 0.0000 Buried
215 E A -0.8902 Soluble
216 V A 0.0000 Buried
217 T A -1.1206 Soluble
218 H A 0.0000 Buried
219 Q A -1.7027 Soluble
220 G A -0.4227 Soluble
221 L A -0.2651 Soluble
222 S A -0.4728 Soluble
223 S A -0.4333 Soluble
224 P A -0.5135 Soluble
225 V A -0.0356 Soluble
226 T A -0.4789 Soluble
227 K A -0.6130 Soluble
228 S A -0.4844 Soluble
229 F A -0.8951 Soluble
230 N A -1.8255 Soluble
231 R A -2.5217 Soluble
232 G A -2.1374 Soluble
233 E A -2.5206 Soluble

3D Structure — colored by A4D score

Sequence - click residue to focus in viewer  |  colored by A4D score
Load structure to view sequence…
Color Legend (B-factor = A4D Score)
Score > 1.5 — highly aggregation-prone
Score 0.5–1.5 — aggregation-prone
Score ≈ 0 — buried
Score −1 to −0.5 — soluble
Score < −2.5 — highly soluble
pH Structure
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A4D Score Threshold
Highlight residues > threshold in the sequence panel
CDR Regions
HCDR1
HCDR2
HCDR3
LCDR1
LCDR2
LCDR3
Display Options

pH-Dependent Aggregation Profiles

A4D scores calculated across 11 pH conditions (4.0–9.0, step 0.5). Click a row to view the structure at that pH. The input structure is globular — max score is recommended for pH analysis.

pH Avg A4D Score Max A4D Score Downloads
4.0 -0.6263 2.8531 CSV PDB
4.5 -0.6725 2.8047 CSV PDB
5.0 -0.7287 2.7347 CSV PDB
5.5 -0.785 2.653 CSV PDB
6.0 -0.8299 2.5665 CSV PDB
6.5 -0.8532 2.4784 CSV PDB
7.0 -0.8531 2.5013 CSV PDB
7.5 -0.8367 2.5777 CSV PDB
8.0 -0.8108 2.6829 CSV PDB
8.5 -0.7779 2.8131 CSV PDB
9.0 -0.7377 2.9458 CSV PDB
Average A4D Score vs pH
Max A4D Score vs pH