Vislarafusp / 5tdp

A4DAB295_5tdp_B_A | Source PDB: 5tdp | Chains: B, A | Done
97.8
Yes
10 Å
Yes
Avg A4D Score
-0.7026
Max Score
2.0135
Min Score
-3.7944
Total Score
-295.11
Score CDR
-0.4534
Score non-CDR
-0.7595

Calculation Parameters

Chain Sequence(s) EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVREAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYSRWAMDYWGQGTLVTVSSASTKGPSVFPLAPSGTAILGCLVKDYFPEPVTVSWNSGALTSGVHTSPAVLQSSGLYMLASAVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQKKPGKAPKLLIYSASFLESGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKRTVAAPSVAIFPPSDEQLKSGTASVVCVLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYALFSVLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC input.pdb
Selected Chain(s) B (Heavy), A (Light)
Distance of Aggregation 10 Å
FoldX Energy Minimization Yes
pH Calculations Yes
Downloads Download all data (.tar.gz)

Aggrescan4D Profile

Aggregation-prone (score > 0)
Soluble (score < 0)
Buried (score = 0)

Per-Residue A4D Scores

Download CSV
Minimum Score -3.7944
Maximum Score 2.0135
Average Score -0.7026
Total Score -295.1096

Residues with A4D score > 0.0 are highlighted as aggregation-prone.

Index Residue Chain A4D Score Classification
1 E B -2.1313 Soluble
2 V B -1.4366 Soluble
3 Q B -1.2951 Soluble
4 L B 0.0000 Buried
5 V B 0.6714 Aggregation-prone
6 E B 0.0000 Buried
7 S B -0.3973 Soluble
8 G B -0.8783 Soluble
9 G B -0.3696 Soluble
11 G B 0.1324 Aggregation-prone
12 L B 0.2451 Aggregation-prone
13 V B -0.4794 Soluble
14 Q B -1.4699 Soluble
15 P B -1.5386 Soluble
16 G B -1.3433 Soluble
17 G B -1.0673 Soluble
18 S B -1.2515 Soluble
19 L B -1.1873 Soluble
20 R B -2.2474 Soluble
21 L B 0.0000 Buried
22 S B -0.5345 Soluble
23 C B 0.0000 Buried
24 A B -0.1943 Soluble
25 A B -0.6245 Soluble
26 S B -1.0299 Soluble
27 G B -1.4188 Soluble
28 F B -1.4625 Soluble
29 N B -2.3400 Soluble
30 I B 0.0000 Buried
35 K B -3.1031 Soluble
36 D B -2.7558 Soluble
37 T B -1.2725 Soluble
38 Y B -0.1221 Soluble
39 I B 0.0000 Buried
40 H B 0.0000 Buried
41 W B 0.0000 Buried
42 V B 0.0000 Buried
43 R B 0.0000 Buried
44 E B -0.9903 Soluble
45 A B -1.3313 Soluble
46 P B -1.2851 Soluble
47 G B -1.6538 Soluble
48 K B -2.6757 Soluble
49 G B -1.7443 Soluble
50 L B 0.0000 Buried
51 E B -1.2967 Soluble
52 W B 0.0000 Buried
53 V B 0.0000 Buried
54 A B 0.0000 Buried
55 R B -0.5632 Soluble
56 I B 0.0000 Buried
57 Y B -0.4339 Soluble
58 P B -1.1954 Soluble
59 T B -1.3657 Soluble
62 N B -1.0129 Soluble
63 G B -0.3880 Soluble
64 Y B 0.5044 Aggregation-prone
65 T B -0.4207 Soluble
66 R B -1.9690 Soluble
67 Y B -1.7689 Soluble
68 A B -1.8347 Soluble
69 D B -2.6498 Soluble
70 S B -1.7460 Soluble
71 V B 0.0000 Buried
72 K B -2.8023 Soluble
74 G B -1.6746 Soluble
75 R B -1.2534 Soluble
76 F B 0.0000 Buried
77 T B -1.1978 Soluble
78 I B 0.0000 Buried
79 S B -0.2365 Soluble
80 A B -1.0126 Soluble
81 D B -1.5819 Soluble
82 T B -1.9363 Soluble
83 S B -1.6295 Soluble
84 K B -2.2164 Soluble
85 N B -1.8634 Soluble
86 T B -1.1263 Soluble
87 A B 0.0000 Buried
88 Y B 0.0000 Buried
89 L B 0.0000 Buried
90 Q B -1.5832 Soluble
91 M B 0.0000 Buried
92 N B -1.2882 Soluble
93 S B -1.1288 Soluble
94 L B 0.0000 Buried
95 R B -2.0946 Soluble
96 A B -1.5954 Soluble
97 E B -2.3903 Soluble
98 D B 0.0000 Buried
99 T B -0.6509 Soluble
100 A B 0.0000 Buried
101 V B 0.2223 Aggregation-prone
102 Y B 0.0000 Buried
103 Y B 0.0000 Buried
105 S B 0.0000 Buried
106 R B -0.2508 Soluble
107 W B 0.0779 Aggregation-prone
108 A B 0.0950 Aggregation-prone
115 M B 0.0000 Buried
116 D B -0.4591 Soluble
117 Y B -0.2571 Soluble
118 W B 0.0000 Buried
119 G B 0.0000 Buried
120 Q B -1.3040 Soluble
121 G B -0.4945 Soluble
122 T B 0.1332 Aggregation-prone
123 L B 0.4272 Aggregation-prone
124 V B 0.0000 Buried
125 T B -0.2482 Soluble
126 V B 0.0000 Buried
127 S B -0.6494 Soluble
128 S B -0.6487 Soluble
129 A B -0.4218 Soluble
130 S B -0.5537 Soluble
131 T B -0.8944 Soluble
132 K B -1.1854 Soluble
133 G B -1.3263 Soluble
134 P B 0.0000 Buried
135 S B -0.2889 Soluble
136 V B 0.0000 Buried
137 F B -0.4686 Soluble
138 P B -0.8673 Soluble
139 L B 0.0000 Buried
140 A B -0.7384 Soluble
141 P B 0.0000 Buried
142 S B -0.2696 Soluble
143 G B -0.6339 Soluble
144 T B -0.3991 Soluble
145 A B -0.1753 Soluble
146 I B 0.1534 Aggregation-prone
147 L B 0.0000 Buried
148 G B 0.0000 Buried
149 C B 0.0000 Buried
150 L B 0.0000 Buried
151 V B 0.0000 Buried
152 K B 0.0000 Buried
153 D B -0.2911 Soluble
154 Y B 0.0000 Buried
155 F B 0.0000 Buried
156 P B 0.0000 Buried
157 E B -0.4917 Soluble
158 P B -0.7721 Soluble
159 V B -0.6904 Soluble
160 T B -0.5593 Soluble
161 V B -0.1285 Soluble
162 S B -0.3942 Soluble
163 W B 0.0000 Buried
164 N B -0.7355 Soluble
165 S B -0.7005 Soluble
166 G B -0.5317 Soluble
167 A B -0.2583 Soluble
168 L B -0.0206 Soluble
169 T B -0.1920 Soluble
170 S B -0.4027 Soluble
171 G B -0.5494 Soluble
172 V B 0.1223 Aggregation-prone
173 H B -0.3714 Soluble
174 T B -0.2064 Soluble
175 S B 0.0000 Buried
176 P B -0.2974 Soluble
177 A B 0.2520 Aggregation-prone
178 V B 0.6407 Aggregation-prone
179 L B 1.4761 Aggregation-prone
180 Q B 0.4852 Aggregation-prone
181 S B -0.0550 Soluble
182 S B -0.1407 Soluble
183 G B 0.1512 Aggregation-prone
184 L B 0.2619 Aggregation-prone
185 Y B 0.5237 Aggregation-prone
186 M B 0.0000 Buried
187 L B 0.0000 Buried
188 A B 0.0000 Buried
189 S B 0.0000 Buried
190 A B 0.0000 Buried
191 V B 0.0000 Buried
192 T B -0.1132 Soluble
193 V B 0.0000 Buried
194 P B -0.5682 Soluble
195 S B -0.4894 Soluble
196 S B -0.6189 Soluble
197 S B -0.6495 Soluble
198 L B -0.8735 Soluble
199 G B -1.0544 Soluble
200 T B -0.9863 Soluble
201 Q B -1.4056 Soluble
202 T B -1.1083 Soluble
203 Y B 0.0000 Buried
204 I B -1.0823 Soluble
205 C B 0.0000 Buried
206 N B -1.3840 Soluble
207 V B 0.0000 Buried
208 N B -1.8550 Soluble
209 H B 0.0000 Buried
210 K B -2.7403 Soluble
211 P B -1.5677 Soluble
212 S B -1.8442 Soluble
213 N B -2.5842 Soluble
214 T B -2.0469 Soluble
215 K B -2.6448 Soluble
216 V B -1.4366 Soluble
217 D B -2.3392 Soluble
218 K B -1.8088 Soluble
219 K B -1.9508 Soluble
220 V B 0.0000 Buried
221 E B -2.3973 Soluble
222 P B -1.1410 Soluble
2 I A -0.5049 Soluble
3 Q A -1.4829 Soluble
4 M A 0.0000 Buried
5 T A -1.3245 Soluble
6 Q A 0.0000 Buried
7 S A -0.7829 Soluble
8 P A -0.7163 Soluble
9 S A -0.9869 Soluble
10 S A -1.0053 Soluble
11 L A -0.6973 Soluble
12 S A -1.1064 Soluble
13 A A 0.0000 Buried
14 S A -0.6602 Soluble
15 V A 0.3707 Aggregation-prone
16 G A -0.6670 Soluble
17 D A -1.6703 Soluble
18 R A -2.2866 Soluble
19 V A 0.0000 Buried
20 T A -0.6348 Soluble
21 I A 0.0000 Buried
22 T A -0.7482 Soluble
23 C A 0.0000 Buried
24 R A -2.7930 Soluble
25 A A 0.0000 Buried
26 S A -1.8275 Soluble
27 Q A -2.5043 Soluble
28 D A -2.7480 Soluble
29 V A 0.0000 Buried
36 N A -1.9120 Soluble
37 T A -0.9217 Soluble
38 A A -0.1789 Soluble
39 V A 0.0000 Buried
40 A A 0.0000 Buried
41 W A 0.0000 Buried
42 Y A 0.0000 Buried
43 Q A 0.0000 Buried
44 K A 0.0000 Buried
45 K A -1.4576 Soluble
46 P A -1.4263 Soluble
47 G A -1.6584 Soluble
48 K A -2.5971 Soluble
49 A A -1.7016 Soluble
50 P A 0.0000 Buried
51 K A -1.6592 Soluble
52 L A 0.0000 Buried
53 L A 0.0000 Buried
54 I A 0.0000 Buried
55 Y A 1.1045 Aggregation-prone
56 S A 0.4159 Aggregation-prone
57 A A 0.0000 Buried
65 S A 0.6774 Aggregation-prone
66 F A 2.0135 Aggregation-prone
67 L A 1.2461 Aggregation-prone
68 E A 0.1230 Aggregation-prone
69 S A -0.2316 Soluble
70 G A -0.5183 Soluble
71 V A -0.3644 Soluble
72 P A -0.3362 Soluble
74 S A -0.3819 Soluble
75 R A -0.6231 Soluble
76 F A 0.0000 Buried
77 S A 0.1433 Aggregation-prone
78 G A 0.1196 Aggregation-prone
79 S A -0.5330 Soluble
80 R A -1.5227 Soluble
83 S A -1.2786 Soluble
84 G A -1.7744 Soluble
85 T A -2.1870 Soluble
86 D A -1.9016 Soluble
87 F A 0.0000 Buried
88 T A -0.7346 Soluble
89 L A 0.0000 Buried
90 T A -0.5938 Soluble
91 I A 0.0000 Buried
92 S A -1.2596 Soluble
93 S A -1.0369 Soluble
94 L A 0.0000 Buried
95 Q A -0.7016 Soluble
96 P A -0.8240 Soluble
97 E A -1.6790 Soluble
98 D A 0.0000 Buried
99 F A -0.5020 Soluble
100 A A 0.0000 Buried
101 T A 0.0000 Buried
102 Y A 0.0000 Buried
103 Y A 0.0000 Buried
104 C A 0.0000 Buried
105 Q A 0.0000 Buried
106 Q A 0.0000 Buried
107 H A 0.3298 Aggregation-prone
108 Y A 0.6555 Aggregation-prone
109 T A 0.5516 Aggregation-prone
114 T A -0.1507 Soluble
115 P A -0.5388 Soluble
116 P A 0.0000 Buried
117 T A -0.3161 Soluble
118 F A -0.4831 Soluble
119 G A 0.0000 Buried
120 Q A -1.8749 Soluble
121 G A 0.0000 Buried
122 T A 0.0000 Buried
123 K A -1.9793 Soluble
124 V A 0.0000 Buried
125 E A -1.3538 Soluble
126 I A -0.8549 Soluble
127 K A -1.5339 Soluble
128 R A -1.0128 Soluble
129 T A -0.1417 Soluble
130 V A 0.3382 Aggregation-prone
131 A A 0.1119 Aggregation-prone
132 A A -0.1423 Soluble
133 P A 0.0000 Buried
134 S A -0.0978 Soluble
135 V A -0.0341 Soluble
136 A A -0.0955 Soluble
137 I A -0.1117 Soluble
138 F A 0.0000 Buried
139 P A -0.6944 Soluble
140 P A 0.0000 Buried
141 S A -1.3505 Soluble
142 D A -2.5871 Soluble
143 E A -2.2785 Soluble
144 Q A 0.0000 Buried
145 L A -1.7385 Soluble
146 K A -2.5692 Soluble
147 S A -1.5551 Soluble
148 G A -1.0460 Soluble
149 T A -0.9031 Soluble
150 A A 0.0000 Buried
151 S A 0.0000 Buried
152 V A 0.0000 Buried
153 V A 0.0000 Buried
154 C A 0.0000 Buried
155 V A 0.0000 Buried
156 L A 0.0000 Buried
157 N A 0.0000 Buried
158 N A -0.7837 Soluble
159 F A 0.0000 Buried
160 Y A 0.0000 Buried
161 P A -1.8253 Soluble
162 R A -3.0630 Soluble
163 E A -3.2494 Soluble
164 A A -2.3605 Soluble
165 K A -2.2585 Soluble
166 V A -0.9620 Soluble
167 Q A -0.4581 Soluble
168 W A 0.0000 Buried
169 K A -0.4836 Soluble
170 V A 0.0000 Buried
171 D A -2.0156 Soluble
172 N A -1.5432 Soluble
173 A A -0.2827 Soluble
174 L A 0.7305 Aggregation-prone
175 Q A -0.0927 Soluble
176 S A -0.4252 Soluble
177 G A -0.9074 Soluble
178 N A -0.8926 Soluble
179 S A -0.9584 Soluble
180 Q A -0.9908 Soluble
181 E A -1.5856 Soluble
182 S A -0.8806 Soluble
183 V A -0.8373 Soluble
184 T A 0.0000 Buried
185 E A -2.2585 Soluble
186 Q A -1.8057 Soluble
187 D A -1.6805 Soluble
188 S A -1.6534 Soluble
189 K A -2.2098 Soluble
190 D A -1.6543 Soluble
191 S A -1.7207 Soluble
192 T A 0.0000 Buried
193 Y A 0.0000 Buried
194 A A 0.0000 Buried
195 L A 0.0000 Buried
196 F A 0.0000 Buried
197 S A 0.0000 Buried
198 V A 0.0000 Buried
199 L A 0.0000 Buried
200 T A -0.3659 Soluble
201 L A -0.7677 Soluble
202 S A -1.1028 Soluble
203 K A -2.0626 Soluble
204 A A -1.9666 Soluble
205 D A -2.7514 Soluble
206 Y A 0.0000 Buried
207 E A -3.7944 Soluble
208 K A -3.7675 Soluble
209 H A -3.1509 Soluble
210 K A -3.3786 Soluble
211 V A -1.6220 Soluble
212 Y A 0.0000 Buried
213 A A 0.0000 Buried
214 C A 0.0000 Buried
215 E A -0.6365 Soluble
216 V A 0.0000 Buried
217 T A -1.1596 Soluble
218 H A 0.0000 Buried
219 Q A -1.5948 Soluble
220 G A -0.4836 Soluble
221 L A -0.2894 Soluble
222 S A -0.4806 Soluble
223 S A -0.4355 Soluble
224 P A -0.5448 Soluble
225 V A 0.0334 Aggregation-prone
226 T A -0.5526 Soluble
227 K A -1.0211 Soluble
228 S A -0.8010 Soluble
229 F A -1.0618 Soluble
230 N A -1.9989 Soluble
231 R A -2.6197 Soluble
232 G A -2.0585 Soluble
233 E A -2.2149 Soluble
234 C A -0.4864 Soluble

3D Structure — colored by A4D score

Sequence - click residue to focus in viewer  |  colored by A4D score
Load structure to view sequence…
Color Legend (B-factor = A4D Score)
Score > 1.5 — highly aggregation-prone
Score 0.5–1.5 — aggregation-prone
Score ≈ 0 — buried
Score −1 to −0.5 — soluble
Score < −2.5 — highly soluble
pH Structure
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A4D Score Threshold
Highlight residues > threshold in the sequence panel
CDR Regions
HCDR1
HCDR2
HCDR3
LCDR1
LCDR2
LCDR3
Display Options

pH-Dependent Aggregation Profiles

A4D scores calculated across 11 pH conditions (4.0–9.0, step 0.5). Click a row to view the structure at that pH. The input structure is globular — max score is recommended for pH analysis.

pH Avg A4D Score Max A4D Score Downloads
4.0 -0.7149 3.5211 CSV PDB
4.5 -0.7617 3.5087 CSV PDB
5.0 -0.8151 3.4909 CSV PDB
5.5 -0.8649 3.4707 CSV PDB
6.0 -0.8993 3.4512 CSV PDB
6.5 -0.9089 3.4355 CSV PDB
7.0 -0.894 3.4261 CSV PDB
7.5 -0.863 3.4218 CSV PDB
8.0 -0.8229 3.4202 CSV PDB
8.5 -0.776 3.4195 CSV PDB
9.0 -0.7222 3.4189 CSV PDB
Average A4D Score vs pH
Max A4D Score vs pH