Tilrekimig2 / 5j13

A4DAB265_5j13_C_B | Source PDB: 5j13 | Chains: C, B | Done
97.83
Yes
10 Å
Yes
Avg A4D Score
-0.7077
Max Score
1.6697
Min Score
-3.1263
Total Score
-298.65
Score CDR
-0.6069
Score non-CDR
-0.7216

Calculation Parameters

Chain Sequence(s) QMQLVESGGGVVQPGRSLRLSCAASGFTFRTYGMHWVRQAPGKGLEWVAVIWYDGSNKHYADSVKGRFTITRDNSKNTLNLQMNSLRAEDTAVYYCARAPQWELVHEAFDIWGQGTMVTVSSASTKGPSVFPLAPCSTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPQTYTCNVDHKPSNTKVDKTVESYVLTQPPSVSVAPGQTARITCGGNNLGSKSVHWYQQKPGQAPVLVVYDDSDRPSWIPERFSGSNSGNTATLTISRGEAGDEADYYCQVWDSSSDHVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC input.pdb
Selected Chain(s) C (Heavy), B (Light)
Distance of Aggregation 10 Å
FoldX Energy Minimization Yes
pH Calculations Yes
Downloads Download all data (.tar.gz)

Aggrescan4D Profile

Aggregation-prone (score > 0)
Soluble (score < 0)
Buried (score = 0)

Per-Residue A4D Scores

Download CSV
Minimum Score -3.1263
Maximum Score 1.6697
Average Score -0.7077
Total Score -298.646

Residues with A4D score > 0.0 are highlighted as aggregation-prone.

Index Residue Chain A4D Score Classification
1 Q C -1.2347 Soluble
2 M C -0.4079 Soluble
3 Q C -1.0293 Soluble
4 L C 0.0000 Buried
5 V C 0.4305 Aggregation-prone
6 E C 0.0000 Buried
7 S C -0.5828 Soluble
8 G C -0.9981 Soluble
9 G C -0.2263 Soluble
11 G C 0.4967 Aggregation-prone
12 V C 1.6697 Aggregation-prone
13 V C -0.0117 Soluble
14 Q C -1.1618 Soluble
15 P C -1.7599 Soluble
16 G C -2.0126 Soluble
17 R C -2.6293 Soluble
18 S C -1.8960 Soluble
19 L C -1.2618 Soluble
20 R C -2.1839 Soluble
21 L C 0.0000 Buried
22 S C -0.6316 Soluble
23 C C 0.0000 Buried
24 A C -0.3637 Soluble
25 A C 0.0000 Buried
26 S C -0.6780 Soluble
27 G C -0.7372 Soluble
28 F C -0.4589 Soluble
29 T C -0.6397 Soluble
30 F C 0.0000 Buried
35 R C -2.6100 Soluble
36 T C -1.0128 Soluble
37 Y C -0.2671 Soluble
38 G C 0.0000 Buried
39 M C 0.0000 Buried
40 H C 0.0000 Buried
41 W C 0.0000 Buried
42 V C 0.0000 Buried
43 R C 0.0000 Buried
44 Q C -0.7796 Soluble
45 A C -1.1447 Soluble
46 P C -0.8439 Soluble
47 G C -1.5008 Soluble
48 K C -2.2885 Soluble
49 G C -1.4744 Soluble
50 L C 0.0000 Buried
51 E C -0.9743 Soluble
52 W C 0.0000 Buried
53 V C 0.0000 Buried
54 A C 0.0000 Buried
55 V C 0.0000 Buried
56 I C 0.0000 Buried
57 W C -0.8303 Soluble
58 Y C -0.9909 Soluble
59 D C -2.2919 Soluble
62 G C -1.7384 Soluble
63 S C -1.3332 Soluble
64 N C -1.7293 Soluble
65 K C -1.6018 Soluble
66 H C -1.5473 Soluble
67 Y C -1.5047 Soluble
68 A C 0.0000 Buried
69 D C -2.5828 Soluble
70 S C -1.8124 Soluble
71 V C 0.0000 Buried
72 K C -2.7235 Soluble
74 G C -1.8446 Soluble
75 R C -1.6268 Soluble
76 F C 0.0000 Buried
77 T C -1.0735 Soluble
78 I C 0.0000 Buried
79 T C -0.6610 Soluble
80 R C -1.4007 Soluble
81 D C -2.1168 Soluble
82 N C -2.5012 Soluble
83 S C -1.9184 Soluble
84 K C -2.6272 Soluble
85 N C -2.2663 Soluble
86 T C -1.4009 Soluble
87 L C 0.0000 Buried
88 N C -0.8590 Soluble
89 L C 0.0000 Buried
90 Q C -1.2040 Soluble
91 M C 0.0000 Buried
92 N C -1.9416 Soluble
93 S C -1.7806 Soluble
94 L C 0.0000 Buried
95 R C -2.4718 Soluble
96 A C -1.7824 Soluble
97 E C -2.3121 Soluble
98 D C 0.0000 Buried
99 T C -0.5442 Soluble
100 A C 0.0000 Buried
101 V C 0.3082 Aggregation-prone
102 Y C 0.0000 Buried
103 Y C 0.0000 Buried
104 C C 0.0000 Buried
105 A C 0.0000 Buried
106 R C 0.0000 Buried
107 A C 0.0000 Buried
108 P C -0.0646 Soluble
109 Q C 0.4111 Aggregation-prone
110 W C 0.7177 Aggregation-prone
111 E C -0.3660 Soluble
111A L C 1.0665 Aggregation-prone
112A V C 0.8127 Aggregation-prone
112 H C 0.0000 Buried
113 E C -0.4220 Soluble
114 A C 0.0000 Buried
115 F C 0.0000 Buried
116 D C -0.1532 Soluble
117 I C 0.0153 Aggregation-prone
118 W C 0.0032 Aggregation-prone
119 G C 0.0000 Buried
120 Q C -1.3365 Soluble
121 G C -0.5320 Soluble
122 T C -0.0248 Soluble
123 M C 0.6652 Aggregation-prone
124 V C 0.0000 Buried
125 T C 0.2889 Aggregation-prone
126 V C 0.0000 Buried
127 S C 0.0000 Buried
128 S C -0.2432 Soluble
129 A C -0.3558 Soluble
130 S C -0.3814 Soluble
131 T C -0.6402 Soluble
132 K C -0.9729 Soluble
133 G C -1.2985 Soluble
134 P C 0.0000 Buried
135 S C -0.3450 Soluble
136 V C 0.0000 Buried
137 F C 0.0000 Buried
138 P C -0.7914 Soluble
139 L C 0.0000 Buried
140 A C -0.3443 Soluble
141 P C -0.2229 Soluble
142 C C -0.2960 Soluble
143 S C -0.4703 Soluble
144 T C -0.1104 Soluble
145 A C -0.0292 Soluble
146 A C 0.1804 Aggregation-prone
147 L C 0.0000 Buried
148 G C 0.0000 Buried
149 C C 0.0000 Buried
150 L C 0.0000 Buried
151 V C 0.0000 Buried
152 K C -0.3535 Soluble
153 D C -0.4589 Soluble
154 Y C 0.0000 Buried
155 F C -0.1121 Soluble
156 P C -0.5876 Soluble
157 E C -0.7356 Soluble
158 P C -0.8347 Soluble
159 V C -0.7179 Soluble
160 T C -0.6771 Soluble
161 V C -0.2805 Soluble
162 S C -0.3583 Soluble
163 W C 0.0000 Buried
164 N C -0.4781 Soluble
165 S C -0.3126 Soluble
166 G C -0.4994 Soluble
167 A C 0.0000 Buried
168 L C 0.7178 Aggregation-prone
169 T C 0.2631 Aggregation-prone
170 S C 0.1074 Aggregation-prone
171 G C 0.4763 Aggregation-prone
172 V C 1.2936 Aggregation-prone
173 H C 0.3989 Aggregation-prone
174 T C 0.1973 Aggregation-prone
175 F C 0.0000 Buried
176 P C -0.1978 Soluble
177 A C 0.1415 Aggregation-prone
178 V C 0.0000 Buried
179 L C 0.7685 Aggregation-prone
180 Q C 0.1207 Aggregation-prone
181 S C -0.6853 Soluble
182 S C -0.3872 Soluble
183 G C 0.0000 Buried
184 L C 0.1003 Aggregation-prone
185 Y C 0.2843 Aggregation-prone
186 S C 0.0000 Buried
187 L C 0.0000 Buried
188 S C 0.0000 Buried
189 S C 0.0000 Buried
190 V C 0.5011 Aggregation-prone
191 V C 0.0000 Buried
192 T C 0.3560 Aggregation-prone
193 V C 0.1159 Aggregation-prone
194 P C -0.2041 Soluble
195 Q C -1.2278 Soluble
196 T C -1.0077 Soluble
197 Y C -0.6253 Soluble
198 T C -1.0696 Soluble
199 C C 0.0000 Buried
200 N C -1.6818 Soluble
201 V C 0.0000 Buried
202 D C -2.0733 Soluble
203 H C 0.0000 Buried
204 K C -2.8124 Soluble
205 P C -1.6355 Soluble
206 S C -1.7652 Soluble
207 N C -2.6095 Soluble
208 T C -2.1021 Soluble
209 K C -2.7772 Soluble
210 V C -1.7284 Soluble
211 D C -2.4895 Soluble
212 K C -1.5893 Soluble
213 T C -1.1796 Soluble
214 V C 0.0000 Buried
215 E C -1.8684 Soluble
1 S B 0.1538 Aggregation-prone
2 Y B 0.5847 Aggregation-prone
3 V B 1.5378 Aggregation-prone
4 L B 0.0000 Buried
5 T B 0.0163 Aggregation-prone
6 Q B 0.0000 Buried
7 P B -0.5324 Soluble
8 P B -0.7212 Soluble
9 S B -0.6027 Soluble
11 V B -0.5588 Soluble
12 S B -0.7835 Soluble
13 V B 0.0000 Buried
14 A B -1.0974 Soluble
15 P B -1.7352 Soluble
16 G B -2.4043 Soluble
17 Q B -2.5959 Soluble
18 T B -2.0385 Soluble
19 A B 0.0000 Buried
20 R B -1.9721 Soluble
21 I B 0.0000 Buried
22 T B -0.5946 Soluble
23 C B 0.0000 Buried
24 G B -0.8755 Soluble
25 G B -1.1734 Soluble
26 N B -2.1864 Soluble
27 N B -2.7811 Soluble
28 L B 0.0000 Buried
29 G B -1.9659 Soluble
36 S B -1.3848 Soluble
37 K B -1.2252 Soluble
38 S B -1.0019 Soluble
39 V B 0.0000 Buried
40 H B 0.0000 Buried
41 W B 0.0000 Buried
42 Y B 0.0000 Buried
43 Q B 0.0000 Buried
44 Q B 0.0000 Buried
45 K B -1.5811 Soluble
46 P B -1.3226 Soluble
47 G B -1.4754 Soluble
48 Q B -1.8683 Soluble
49 A B -0.9698 Soluble
50 P B 0.0000 Buried
51 V B 0.3964 Aggregation-prone
52 L B 0.0000 Buried
53 V B 0.0000 Buried
54 V B 0.0000 Buried
55 Y B -1.3961 Soluble
56 D B -2.2138 Soluble
57 D B -1.8443 Soluble
65 S B -1.7738 Soluble
66 D B -2.3695 Soluble
67 R B -1.8720 Soluble
68 P B 0.0000 Buried
69 S B -0.1917 Soluble
70 W B 0.7246 Aggregation-prone
71 I B -0.0073 Soluble
72 P B -0.9288 Soluble
74 E B -2.0120 Soluble
75 R B -1.7493 Soluble
76 F B 0.0000 Buried
77 S B -1.3013 Soluble
78 G B -1.2204 Soluble
79 S B -1.0312 Soluble
80 N B -1.3257 Soluble
83 S B -1.3867 Soluble
84 G B -1.9863 Soluble
85 N B -2.6529 Soluble
86 T B -1.5095 Soluble
87 A B 0.0000 Buried
88 T B -0.7726 Soluble
89 L B 0.0000 Buried
90 T B -1.0890 Soluble
91 I B 0.0000 Buried
92 S B -2.1936 Soluble
93 R B -3.0389 Soluble
94 G B 0.0000 Buried
95 E B -2.8701 Soluble
96 A B -1.5727 Soluble
97 G B -1.3754 Soluble
98 D B 0.0000 Buried
99 E B -1.6452 Soluble
100 A B 0.0000 Buried
101 D B -1.1324 Soluble
102 Y B 0.0000 Buried
103 Y B 0.0000 Buried
104 C B 0.0000 Buried
105 Q B 0.0000 Buried
106 V B 0.0000 Buried
107 W B 0.0000 Buried
108 D B 0.0000 Buried
109 S B -0.2600 Soluble
110 S B -0.5841 Soluble
113 S B -0.6150 Soluble
114 D B -0.6580 Soluble
115 H B -0.7768 Soluble
116 V B 0.0000 Buried
117 V B 0.3588 Aggregation-prone
118 F B 0.2597 Aggregation-prone
119 G B 0.0000 Buried
120 G B -0.7995 Soluble
121 G B -0.8976 Soluble
122 T B 0.0000 Buried
123 K B -1.2748 Soluble
124 L B 0.0000 Buried
125 T B -0.7267 Soluble
126 V B 0.0000 Buried
127 L B -0.4935 Soluble
128 G B -0.8496 Soluble
129 Q B -1.1042 Soluble
130 P B -1.2153 Soluble
131 K B -2.1147 Soluble
132 A B -1.2566 Soluble
133 A B -0.7245 Soluble
134 P B 0.0000 Buried
135 S B -0.5765 Soluble
136 V B 0.0000 Buried
137 T B -0.4560 Soluble
138 L B 0.0000 Buried
139 F B 0.0000 Buried
140 P B 0.0000 Buried
141 P B 0.0000 Buried
142 S B -0.9098 Soluble
143 S B -1.2121 Soluble
144 E B -2.5537 Soluble
145 E B 0.0000 Buried
146 L B -2.0834 Soluble
147 Q B -2.3906 Soluble
148 A B -1.9522 Soluble
149 N B -2.6722 Soluble
150 K B -2.5745 Soluble
151 A B 0.0000 Buried
152 T B 0.0000 Buried
153 L B 0.0000 Buried
154 V B 0.0000 Buried
155 C B 0.0000 Buried
156 L B 0.0000 Buried
157 I B 0.0000 Buried
158 S B -0.8232 Soluble
159 D B -1.8153 Soluble
160 F B 0.0000 Buried
161 Y B 0.0000 Buried
162 P B 0.0000 Buried
163 G B -0.8138 Soluble
164 A B 0.0000 Buried
165 V B 0.1362 Aggregation-prone
166 T B 0.0111 Aggregation-prone
167 V B 0.1012 Aggregation-prone
168 A B -0.4039 Soluble
169 W B 0.0000 Buried
170 K B -0.9116 Soluble
171 A B -1.0132 Soluble
172 D B -1.3361 Soluble
173 S B -0.8644 Soluble
174 S B -0.7901 Soluble
175 P B -0.9172 Soluble
176 V B -0.8584 Soluble
177 K B -1.6595 Soluble
178 A B -0.8094 Soluble
179 G B -0.5617 Soluble
180 V B -0.2778 Soluble
181 E B -0.3926 Soluble
182 T B -0.0617 Soluble
183 T B -0.1220 Soluble
184 T B -0.5538 Soluble
185 P B -0.5197 Soluble
186 S B -1.1536 Soluble
187 K B -2.5013 Soluble
188 Q B -2.0511 Soluble
189 S B -1.5272 Soluble
190 N B -2.0992 Soluble
191 N B -2.6517 Soluble
192 K B -2.3638 Soluble
193 Y B -1.4737 Soluble
194 A B 0.0000 Buried
195 A B 0.0000 Buried
196 S B 0.0000 Buried
197 S B 0.0000 Buried
198 Y B 0.0000 Buried
199 L B 0.0000 Buried
200 S B -0.5781 Soluble
201 L B 0.0000 Buried
202 T B -1.8496 Soluble
203 P B -2.4472 Soluble
204 E B -3.1263 Soluble
205 Q B -2.2985 Soluble
206 W B 0.0000 Buried
207 K B -3.0518 Soluble
208 S B -2.3880 Soluble
209 H B -2.3309 Soluble
210 R B -2.6913 Soluble
211 S B -1.7472 Soluble
212 Y B 0.0000 Buried
213 S B -1.0332 Soluble
214 C B 0.0000 Buried
215 Q B -1.0301 Soluble
216 V B 0.0000 Buried
217 T B -0.4429 Soluble
218 H B 0.0000 Buried
219 E B -1.1676 Soluble
220 G B -0.9188 Soluble
221 S B -0.5731 Soluble
222 T B -0.5959 Soluble
223 V B -0.7587 Soluble
224 E B -2.1063 Soluble
225 K B -1.6727 Soluble
226 T B -0.9952 Soluble
227 V B 0.0000 Buried
228 A B -1.3249 Soluble
229 P B 0.0000 Buried
230 T B -1.4262 Soluble
231 E B -1.7348 Soluble
232 C B -0.2319 Soluble

3D Structure — colored by A4D score

Sequence - click residue to focus in viewer  |  colored by A4D score
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Color Legend (B-factor = A4D Score)
Score > 1.5 — highly aggregation-prone
Score 0.5–1.5 — aggregation-prone
Score ≈ 0 — buried
Score −1 to −0.5 — soluble
Score < −2.5 — highly soluble
pH Structure
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A4D Score Threshold
Highlight residues > threshold in the sequence panel
CDR Regions
HCDR1
HCDR2
HCDR3
LCDR1
LCDR2
LCDR3
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pH-Dependent Aggregation Profiles

A4D scores calculated across 11 pH conditions (4.0–9.0, step 0.5). Click a row to view the structure at that pH. The input structure is globular — max score is recommended for pH analysis.

pH Avg A4D Score Max A4D Score Downloads
4.0 -0.634 3.7766 CSV PDB
4.5 -0.6759 3.6301 CSV PDB
5.0 -0.7261 3.4152 CSV PDB
5.5 -0.7758 3.1671 CSV PDB
6.0 -0.8144 2.9246 CSV PDB
6.5 -0.8335 2.7271 CSV PDB
7.0 -0.8314 2.6039 CSV PDB
7.5 -0.8141 2.5467 CSV PDB
8.0 -0.7878 2.5253 CSV PDB
8.5 -0.755 2.5181 CSV PDB
9.0 -0.7165 2.5157 CSV PDB
Average A4D Score vs pH
Max A4D Score vs pH