Tamtuvetmab / 1bfo

A4DAB255_1bfo_B_A | Source PDB: 1bfo | Chains: B, A | Done
96.93
Yes
10 Å
Yes
Avg A4D Score
-0.6605
Max Score
1.6329
Min Score
-3.3771
Total Score
-284.02
Score CDR
-0.9508
Score non-CDR
-0.624

Calculation Parameters

Chain Sequence(s) EVKLLESGGGLVQPGGSMRLSCAGSGFTFTDFYMNWIRQPAGKAPEWLGFIRDKAKGYTTEYNPSVKGRFTISRDNTQNMLYLQMNTLRAEDTATYYCAREGHTAAPFDYWGQGVMVTVSSAQTTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVTVTWNSGALSSDVHTFPAVLQSGLYTLTSSVTSSTWPSQTVTCNVAHPASSTKVDKKVDIKMTQSPSFLSASVGDRVTLNCKASQNIDKYLNWYQQKLGESPKLLIYNTNNLQTGIPSRFSGSGSGTDFTLTISSLQPEDVATYFCLQHISRPRTFGTGTKLELKRANAAPTVSIFPPSTEQLATGGASVVCLMNKFYPRDISVKWKIDGTERNGVLNSVTDQDSADSTYSMSSTLSLTKADYQSHNLYTCQVVHKTSSSPVVAKNFNRNEC input.pdb
Selected Chain(s) B (Heavy), A (Light)
Distance of Aggregation 10 Å
FoldX Energy Minimization Yes
pH Calculations Yes
Downloads Download all data (.tar.gz)

Aggrescan4D Profile

Aggregation-prone (score > 0)
Soluble (score < 0)
Buried (score = 0)

Per-Residue A4D Scores

Download CSV
Minimum Score -3.3771
Maximum Score 1.6329
Average Score -0.6605
Total Score -284.0202

Residues with A4D score > 0.0 are highlighted as aggregation-prone.

Index Residue Chain A4D Score Classification
1 E B -0.9588 Soluble
2 V B 0.2265 Aggregation-prone
3 K B -1.1043 Soluble
4 L B 0.0000 Buried
5 L B 0.5663 Aggregation-prone
6 E B 0.0000 Buried
7 S B -0.3632 Soluble
8 G B -0.8376 Soluble
9 G B -0.7150 Soluble
11 G B -0.0231 Soluble
12 L B -0.1255 Soluble
13 V B -0.7429 Soluble
14 Q B -1.6937 Soluble
15 P B -1.6744 Soluble
16 G B -1.3638 Soluble
17 G B -1.0624 Soluble
18 S B -1.3239 Soluble
19 M B -1.3329 Soluble
20 R B -2.3112 Soluble
21 L B 0.0000 Buried
22 S B -0.4235 Soluble
23 C B 0.0000 Buried
24 A B -0.1664 Soluble
25 G B -0.5202 Soluble
26 S B -0.6028 Soluble
27 G B -0.6300 Soluble
28 F B -0.4892 Soluble
29 T B -0.5847 Soluble
30 F B 0.0000 Buried
35 T B -1.2280 Soluble
36 D B -1.6596 Soluble
37 F B 0.0000 Buried
38 Y B -0.8544 Soluble
39 M B 0.0000 Buried
40 N B 0.0000 Buried
41 W B 0.0000 Buried
42 I B 0.0000 Buried
43 R B 0.0000 Buried
44 Q B -0.7267 Soluble
45 P B -1.0416 Soluble
46 A B -0.7033 Soluble
47 G B -1.2978 Soluble
48 K B -2.0308 Soluble
49 A B -1.0930 Soluble
50 P B 0.0000 Buried
51 E B -0.7722 Soluble
52 W B 0.0000 Buried
53 L B 0.0000 Buried
54 G B 0.0000 Buried
55 F B 0.0000 Buried
56 I B 0.0000 Buried
57 R B -1.6348 Soluble
58 D B -2.0941 Soluble
59 K B -2.6630 Soluble
60 A B -1.8806 Soluble
61 K B -2.3493 Soluble
62 G B -1.7732 Soluble
63 Y B -1.1621 Soluble
64 T B -0.9135 Soluble
65 T B -0.5890 Soluble
66 E B -1.1552 Soluble
67 Y B -1.0531 Soluble
68 N B 0.0000 Buried
69 P B -1.4001 Soluble
70 S B -0.8338 Soluble
71 V B 0.0000 Buried
72 K B -2.0690 Soluble
74 G B -1.3987 Soluble
75 R B 0.0000 Buried
76 F B 0.0000 Buried
77 T B -0.9610 Soluble
78 I B 0.0000 Buried
79 S B -0.3806 Soluble
80 R B 0.0000 Buried
81 D B -1.3735 Soluble
82 N B -1.5885 Soluble
83 T B -1.1844 Soluble
84 Q B -1.7234 Soluble
85 N B -1.2755 Soluble
86 M B -0.6073 Soluble
87 L B 0.0000 Buried
88 Y B -0.6355 Soluble
89 L B 0.0000 Buried
90 Q B -1.5601 Soluble
91 M B 0.0000 Buried
92 N B -1.3134 Soluble
93 T B -1.0883 Soluble
94 L B 0.0000 Buried
95 R B -2.2266 Soluble
96 A B -1.7249 Soluble
97 E B -2.2017 Soluble
98 D B 0.0000 Buried
99 T B -0.7443 Soluble
100 A B 0.0000 Buried
101 T B 0.0222 Aggregation-prone
102 Y B 0.0000 Buried
103 Y B 0.0000 Buried
104 C B 0.0000 Buried
105 A B 0.0000 Buried
106 R B 0.0000 Buried
107 E B -0.3620 Soluble
108 G B -0.8439 Soluble
109 H B -1.1747 Soluble
110 T B -0.6827 Soluble
112 A B -0.4273 Soluble
113 A B -0.4001 Soluble
114 P B 0.0000 Buried
115 F B 0.0000 Buried
116 D B -0.5489 Soluble
117 Y B -0.2634 Soluble
118 W B -0.6608 Soluble
119 G B 0.0000 Buried
120 Q B -1.4830 Soluble
121 G B -0.5580 Soluble
122 V B 0.1371 Aggregation-prone
123 M B 0.3058 Aggregation-prone
124 V B 0.0000 Buried
125 T B 0.0000 Buried
126 V B 0.0000 Buried
127 S B -1.1529 Soluble
128 S B -0.9827 Soluble
129 A B -0.8388 Soluble
130 Q B -1.3225 Soluble
131 T B -0.6376 Soluble
132 T B -0.3452 Soluble
133 A B -0.4456 Soluble
134 P B -0.2563 Soluble
135 S B -0.2093 Soluble
136 V B 0.0000 Buried
137 Y B -0.6032 Soluble
138 P B -0.7291 Soluble
139 L B 0.0000 Buried
140 A B -0.0389 Soluble
141 P B -0.2185 Soluble
142 G B -0.8200 Soluble
143 C B -1.3420 Soluble
144 G B -1.2507 Soluble
145 D B -1.1899 Soluble
146 T B -0.5052 Soluble
147 T B -0.4334 Soluble
148 S B -0.4177 Soluble
149 S B -0.3800 Soluble
150 T B -0.2697 Soluble
151 V B 0.0000 Buried
152 T B -0.0769 Soluble
153 L B 0.0000 Buried
154 G B 0.0000 Buried
155 C B 0.0000 Buried
156 L B 0.0000 Buried
157 V B 0.0000 Buried
158 K B -0.3041 Soluble
159 G B 0.0067 Aggregation-prone
160 Y B 0.0000 Buried
161 F B 0.0000 Buried
162 P B 0.0000 Buried
163 E B -0.4035 Soluble
164 P B -0.3887 Soluble
165 V B -0.2236 Soluble
166 T B -0.2607 Soluble
167 V B -0.1926 Soluble
168 T B -0.3161 Soluble
169 W B 0.0000 Buried
170 N B -0.8473 Soluble
171 S B -0.6614 Soluble
172 G B -0.4163 Soluble
173 A B -0.1814 Soluble
174 L B -0.0862 Soluble
175 S B -0.2891 Soluble
176 S B -0.3016 Soluble
177 D B -0.3311 Soluble
178 V B 0.2355 Aggregation-prone
179 H B 0.0000 Buried
180 T B 0.1682 Aggregation-prone
181 F B 0.0000 Buried
182 P B -0.1286 Soluble
183 A B 0.3729 Aggregation-prone
184 V B 0.8781 Aggregation-prone
185 L B 1.6329 Aggregation-prone
186 Q B 0.5204 Aggregation-prone
187 S B 0.0555 Aggregation-prone
188 G B 0.0477 Aggregation-prone
189 L B 0.4900 Aggregation-prone
190 Y B 0.7071 Aggregation-prone
191 T B 0.0000 Buried
192 L B 0.0000 Buried
193 T B 0.0000 Buried
194 S B 0.0000 Buried
195 S B 0.0000 Buried
196 V B 0.0000 Buried
197 T B -0.0839 Soluble
198 S B 0.0000 Buried
199 S B -0.4839 Soluble
200 T B -0.5480 Soluble
201 W B -0.3639 Soluble
202 P B -0.5836 Soluble
203 S B -0.9073 Soluble
204 Q B -1.3750 Soluble
205 T B -0.9425 Soluble
206 V B 0.0000 Buried
207 T B -1.4373 Soluble
208 C B 0.0000 Buried
209 N B -1.5849 Soluble
210 V B 0.0000 Buried
211 A B -0.9442 Soluble
212 H B 0.0000 Buried
213 P B -0.6914 Soluble
214 A B -0.2909 Soluble
215 S B -0.4838 Soluble
216 S B -0.6983 Soluble
217 T B -0.9017 Soluble
218 K B -2.0632 Soluble
219 V B -1.7225 Soluble
220 D B -2.7127 Soluble
221 K B -2.1937 Soluble
222 K B -2.1125 Soluble
223 V B -0.5152 Soluble
1 D A -2.8228 Soluble
2 I A 0.0000 Buried
3 K A -2.6166 Soluble
4 M A 0.0000 Buried
5 T A -1.0714 Soluble
6 Q A 0.0000 Buried
7 S A -0.5181 Soluble
8 P A -0.2953 Soluble
9 S A -0.2491 Soluble
10 F A 0.2339 Aggregation-prone
11 L A 0.0584 Aggregation-prone
12 S A -0.2838 Soluble
13 A A -0.8942 Soluble
14 S A -1.0383 Soluble
15 V A -0.5039 Soluble
16 G A -1.0248 Soluble
17 D A -2.0228 Soluble
18 R A -2.4746 Soluble
19 V A 0.0000 Buried
20 T A -0.5839 Soluble
21 L A 0.0000 Buried
22 N A -0.9833 Soluble
23 C A 0.0000 Buried
24 K A -2.1135 Soluble
25 A A 0.0000 Buried
26 S A -2.2341 Soluble
27 Q A -2.8703 Soluble
28 N A -2.6175 Soluble
29 I A 0.0000 Buried
36 D A -2.4810 Soluble
37 K A -2.3507 Soluble
38 Y A -0.5856 Soluble
39 L A 0.0000 Buried
40 N A 0.0000 Buried
41 W A 0.0000 Buried
42 Y A 0.0000 Buried
43 Q A 0.0000 Buried
44 Q A -0.9590 Soluble
45 K A -0.9603 Soluble
46 L A 0.3562 Aggregation-prone
47 G A -0.9244 Soluble
48 E A -2.2266 Soluble
49 S A -1.5200 Soluble
50 P A 0.0000 Buried
51 K A -1.3843 Soluble
52 L A 0.0000 Buried
53 L A 0.0000 Buried
54 I A 0.0000 Buried
55 Y A -0.5566 Soluble
56 N A -1.0838 Soluble
57 T A 0.0000 Buried
65 N A -1.8214 Soluble
66 N A -1.0508 Soluble
67 L A -0.2336 Soluble
68 Q A -0.3766 Soluble
69 T A -0.2593 Soluble
70 G A -0.3642 Soluble
71 I A -0.0171 Soluble
72 P A -0.2718 Soluble
74 S A -0.4039 Soluble
75 R A -0.8414 Soluble
76 F A 0.0000 Buried
77 S A -0.7058 Soluble
78 G A 0.0000 Buried
79 S A -1.3463 Soluble
80 G A -1.5695 Soluble
83 S A -1.9282 Soluble
84 G A -2.2362 Soluble
85 T A -2.2071 Soluble
86 D A -2.2211 Soluble
87 F A 0.0000 Buried
88 T A -0.9102 Soluble
89 L A 0.0000 Buried
90 T A -0.6563 Soluble
91 I A 0.0000 Buried
92 S A -1.5040 Soluble
93 S A -1.4085 Soluble
94 L A 0.0000 Buried
95 Q A -1.1318 Soluble
96 P A -1.1360 Soluble
97 E A -1.9222 Soluble
98 D A 0.0000 Buried
99 V A -0.2555 Soluble
100 A A 0.0000 Buried
101 T A -0.1136 Soluble
102 Y A 0.0000 Buried
103 F A 0.0000 Buried
104 C A 0.0000 Buried
105 L A 0.0000 Buried
106 Q A 0.0000 Buried
107 H A -0.1344 Soluble
108 I A 0.3592 Aggregation-prone
109 S A -0.6759 Soluble
114 R A -2.1313 Soluble
115 P A -1.6897 Soluble
116 R A -1.2260 Soluble
117 T A -1.1229 Soluble
118 F A 0.0000 Buried
119 G A 0.0000 Buried
120 T A -0.6983 Soluble
121 G A -0.5925 Soluble
122 T A 0.0000 Buried
123 K A -0.5140 Soluble
124 L A 0.0000 Buried
125 E A 0.0000 Buried
126 L A 0.0000 Buried
127 K A -1.6438 Soluble
128 R A -1.5441 Soluble
129 A A -1.0806 Soluble
130 N A -1.5699 Soluble
131 A A -0.7873 Soluble
132 A A -0.4839 Soluble
133 P A -0.2714 Soluble
134 T A -0.1900 Soluble
135 V A 0.0000 Buried
136 S A -0.3937 Soluble
137 I A 0.0000 Buried
138 F A 0.0000 Buried
139 P A -0.2984 Soluble
140 P A -0.4214 Soluble
141 S A -0.6112 Soluble
142 T A -0.8634 Soluble
143 E A -1.6988 Soluble
144 Q A 0.0000 Buried
145 L A -0.7065 Soluble
146 A A -0.6951 Soluble
147 T A -0.6480 Soluble
148 G A -0.9162 Soluble
149 G A -0.8026 Soluble
150 A A 0.0000 Buried
151 S A 0.0000 Buried
152 V A 0.0000 Buried
153 V A 0.0000 Buried
154 C A 0.0000 Buried
155 L A 0.0000 Buried
156 M A 0.0000 Buried
157 N A 0.0000 Buried
158 K A -1.1446 Soluble
159 F A 0.0000 Buried
160 Y A 0.0000 Buried
161 P A -2.1176 Soluble
162 R A -2.5693 Soluble
163 D A -2.3754 Soluble
164 I A -1.2075 Soluble
165 S A -0.7960 Soluble
166 V A -0.1492 Soluble
167 K A -1.6145 Soluble
168 W A 0.0000 Buried
169 K A -2.4269 Soluble
170 I A 0.0000 Buried
171 D A -2.0949 Soluble
172 G A -1.7362 Soluble
173 T A -2.1540 Soluble
174 E A -3.3771 Soluble
175 R A -3.2989 Soluble
176 N A -2.4632 Soluble
177 G A -0.9920 Soluble
178 V A -0.6972 Soluble
179 L A -0.1205 Soluble
180 N A -0.5459 Soluble
181 S A -0.0672 Soluble
182 V A 0.2525 Aggregation-prone
183 T A -0.3689 Soluble
184 D A -0.8110 Soluble
185 Q A -1.0500 Soluble
186 D A -1.1661 Soluble
187 S A -0.9799 Soluble
188 A A -0.5557 Soluble
189 D A -0.9495 Soluble
190 S A -1.1719 Soluble
191 T A 0.0000 Buried
192 Y A 0.0000 Buried
193 S A 0.0000 Buried
194 M A 0.0000 Buried
195 S A 0.0000 Buried
196 S A 0.0000 Buried
197 T A 0.0000 Buried
198 L A 0.0000 Buried
199 S A -0.1779 Soluble
200 L A -0.5755 Soluble
201 T A -0.9938 Soluble
202 K A -1.4736 Soluble
203 A A -1.4165 Soluble
204 D A -2.0717 Soluble
205 Y A 0.0000 Buried
206 Q A -2.1580 Soluble
207 S A -1.5940 Soluble
208 H A -1.8053 Soluble
209 N A -2.2193 Soluble
210 L A -1.3780 Soluble
211 Y A 0.0000 Buried
212 T A -1.4982 Soluble
213 C A 0.0000 Buried
214 Q A -0.5060 Soluble
215 V A 0.0000 Buried
216 V A 0.0084 Aggregation-prone
217 H A 0.0000 Buried
218 K A -2.0278 Soluble
219 T A -1.2087 Soluble
220 S A -0.7102 Soluble
221 S A -0.3212 Soluble
222 S A -0.3333 Soluble
223 P A 0.1365 Aggregation-prone
224 V A 0.6401 Aggregation-prone
225 V A 0.6656 Aggregation-prone
226 A A -0.2094 Soluble
227 K A -1.1279 Soluble
228 N A -1.5758 Soluble
229 F A 0.0000 Buried
230 N A -2.1034 Soluble
231 R A -2.2842 Soluble
232 N A -2.5997 Soluble
233 E A -2.5836 Soluble
234 C A -0.7365 Soluble

3D Structure — colored by A4D score

Sequence - click residue to focus in viewer  |  colored by A4D score
Load structure to view sequence…
Color Legend (B-factor = A4D Score)
Score > 1.5 — highly aggregation-prone
Score 0.5–1.5 — aggregation-prone
Score ≈ 0 — buried
Score −1 to −0.5 — soluble
Score < −2.5 — highly soluble
pH Structure
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A4D Score Threshold
Highlight residues > threshold in the sequence panel
CDR Regions
HCDR1
HCDR2
HCDR3
LCDR1
LCDR2
LCDR3
Display Options

pH-Dependent Aggregation Profiles

A4D scores calculated across 11 pH conditions (4.0–9.0, step 0.5). Click a row to view the structure at that pH. The input structure is globular — max score is recommended for pH analysis.

pH Avg A4D Score Max A4D Score Downloads
4.0 -0.6162 2.1837 CSV PDB
4.5 -0.6555 2.1457 CSV PDB
5.0 -0.7011 2.0866 CSV PDB
5.5 -0.7452 2.0155 CSV PDB
6.0 -0.7777 1.9439 CSV PDB
6.5 -0.7899 1.9356 CSV PDB
7.0 -0.7815 1.9356 CSV PDB
7.5 -0.76 1.9356 CSV PDB
8.0 -0.7317 1.9356 CSV PDB
8.5 -0.6978 1.9356 CSV PDB
9.0 -0.6572 1.9355 CSV PDB
Average A4D Score vs pH
Max A4D Score vs pH