Motavizumab / 5k8a

A4DAB172_5k8a_H_L | Source PDB: 5k8a | Chains: H, L | Done
100
Yes
10 Å
Yes
Avg A4D Score
-0.6913
Max Score
2.493
Min Score
-3.6487
Total Score
-300.7
Score CDR
-0.2097
Score non-CDR
-0.7482

Calculation Parameters

Chain Sequence(s) VTLRESGPALVKPTQTLTLTCTFSGFSLSTAGMSVGWIRQPPGKALEWLADIWWDDKKHYNPSLKDRLTISKDTSKNQVVLKVTNMDPADTATYYCARDMIFNFYFDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDIQMTQSPSTLSASVGDRVTITCSASSRVGYMHWYQQKPGKAPKLLIYDTSKLASGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCFQGSGYPFTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC input.pdb
Selected Chain(s) H (Heavy), L (Light)
Distance of Aggregation 10 Å
FoldX Energy Minimization Yes
pH Calculations Yes
Downloads Download all data (.tar.gz)

Aggrescan4D Profile

Aggregation-prone (score > 0)
Soluble (score < 0)
Buried (score = 0)

Per-Residue A4D Scores

Download CSV
Minimum Score -3.6487
Maximum Score 2.493
Average Score -0.6913
Total Score -300.7031

Residues with A4D score > 0.0 are highlighted as aggregation-prone.

Index Residue Chain A4D Score Classification
2 V H 1.2601 Aggregation-prone
3 T H 0.0931 Aggregation-prone
4 L H 0.0000 Buried
5 R H -2.0211 Soluble
6 E H 0.0000 Buried
7 S H -0.6311 Soluble
8 G H -0.3133 Soluble
9 P H -0.3806 Soluble
11 A H -0.3905 Soluble
12 L H -0.2124 Soluble
13 V H 0.0000 Buried
14 K H -1.9793 Soluble
15 P H -1.7200 Soluble
16 T H -1.7755 Soluble
17 Q H -2.0699 Soluble
18 T H -1.5764 Soluble
19 L H 0.0000 Buried
20 T H -0.6440 Soluble
21 L H 0.0000 Buried
22 T H -0.5200 Soluble
23 C H 0.0000 Buried
24 T H -1.2944 Soluble
25 F H 0.0000 Buried
26 S H -0.5193 Soluble
27 G H 0.1011 Aggregation-prone
28 F H 0.1524 Aggregation-prone
29 S H -0.3479 Soluble
30 L H 0.0000 Buried
31 S H -0.6405 Soluble
34 T H -0.1495 Soluble
35 A H 0.0450 Aggregation-prone
36 G H 0.0000 Buried
37 M H 0.0000 Buried
38 S H 0.0000 Buried
39 V H 0.0000 Buried
40 G H 0.0000 Buried
41 W H 0.0000 Buried
42 I H 0.0000 Buried
43 R H 0.0000 Buried
44 Q H -0.9065 Soluble
45 P H -0.9865 Soluble
46 P H -1.0423 Soluble
47 G H -1.4546 Soluble
48 K H -2.1970 Soluble
49 A H -1.2520 Soluble
50 L H 0.0000 Buried
51 E H -0.8439 Soluble
52 W H 0.0000 Buried
53 L H 0.0000 Buried
54 A H 0.0000 Buried
55 D H 0.0000 Buried
56 I H 0.0000 Buried
57 W H 0.0000 Buried
58 W H -1.0251 Soluble
59 D H -2.0207 Soluble
63 D H -2.5542 Soluble
64 K H -2.7715 Soluble
65 K H -2.0330 Soluble
66 H H -1.0970 Soluble
67 Y H -0.8342 Soluble
68 N H -0.8397 Soluble
69 P H -1.2964 Soluble
70 S H -1.0902 Soluble
71 L H 0.0000 Buried
72 K H -2.7404 Soluble
74 D H -2.8048 Soluble
75 R H -2.2404 Soluble
76 L H 0.0000 Buried
77 T H -1.1285 Soluble
78 I H 0.0000 Buried
79 S H -1.0997 Soluble
80 K H -1.5135 Soluble
81 D H -2.2502 Soluble
82 T H -1.6792 Soluble
83 S H -1.7498 Soluble
84 K H -2.6440 Soluble
85 N H -2.1039 Soluble
86 Q H -1.8800 Soluble
87 V H 0.0000 Buried
88 V H -0.3434 Soluble
89 L H 0.0000 Buried
90 K H -1.3548 Soluble
91 V H 0.0000 Buried
92 T H -1.7460 Soluble
93 N H -2.2642 Soluble
94 M H 0.0000 Buried
95 D H -1.7717 Soluble
96 P H -0.8543 Soluble
97 A H -0.3638 Soluble
98 D H 0.0000 Buried
99 T H -0.2949 Soluble
100 A H 0.0000 Buried
101 T H -0.3407 Soluble
102 Y H 0.0000 Buried
103 Y H 0.0000 Buried
104 C H 0.0000 Buried
105 A H 0.0000 Buried
106 R H 0.0000 Buried
107 D H 0.0000 Buried
108 M H 1.3249 Aggregation-prone
109 I H 2.1273 Aggregation-prone
110 F H 2.4930 Aggregation-prone
112 N H 1.1774 Aggregation-prone
113 F H 1.1260 Aggregation-prone
114 Y H 0.0000 Buried
115 F H 0.0000 Buried
116 D H -0.2568 Soluble
117 V H 0.1694 Aggregation-prone
118 W H -0.4268 Soluble
119 G H 0.0000 Buried
120 Q H -2.0328 Soluble
121 G H -1.3479 Soluble
122 T H -0.6788 Soluble
123 T H -0.3684 Soluble
124 V H 0.0000 Buried
125 T H 0.0000 Buried
126 V H 0.0000 Buried
127 S H -0.7577 Soluble
128 S H -0.6493 Soluble
129 A H -0.4934 Soluble
130 S H -0.6322 Soluble
131 T H -0.8682 Soluble
132 K H -1.4659 Soluble
133 G H -1.5778 Soluble
134 P H 0.0000 Buried
135 S H -0.4565 Soluble
136 V H 0.0000 Buried
137 F H 0.0000 Buried
138 P H -1.1260 Soluble
139 L H 0.0000 Buried
140 A H -1.3317 Soluble
141 P H 0.0000 Buried
142 S H -0.9953 Soluble
143 S H -0.5503 Soluble
144 K H -0.8463 Soluble
145 S H 0.0000 Buried
146 T H -0.6399 Soluble
147 S H -0.6564 Soluble
148 G H -0.7870 Soluble
149 G H -0.8825 Soluble
150 T H -0.5892 Soluble
151 A H 0.0000 Buried
152 A H 0.0000 Buried
153 L H 0.0000 Buried
154 G H 0.0000 Buried
155 C H 0.0000 Buried
156 L H 0.0000 Buried
157 V H 0.0000 Buried
158 K H 0.0000 Buried
159 D H -0.5691 Soluble
160 Y H 0.0000 Buried
161 F H 0.0000 Buried
162 P H 0.0000 Buried
163 E H -0.4810 Soluble
164 P H -0.7438 Soluble
165 V H -0.7955 Soluble
166 T H -0.7420 Soluble
167 V H -0.3050 Soluble
168 S H -0.3944 Soluble
169 W H 0.0000 Buried
170 N H -0.7583 Soluble
171 S H -0.5717 Soluble
172 G H -0.4391 Soluble
173 A H -0.1940 Soluble
174 L H -0.0590 Soluble
175 T H -0.1520 Soluble
176 S H -0.1776 Soluble
177 G H -0.1899 Soluble
178 V H 0.1669 Aggregation-prone
179 H H -0.2850 Soluble
180 T H -0.1612 Soluble
181 F H 0.0000 Buried
182 P H -0.4061 Soluble
183 A H 0.1658 Aggregation-prone
184 V H 0.4874 Aggregation-prone
185 L H 0.9503 Aggregation-prone
186 Q H 0.1135 Aggregation-prone
187 S H -0.3084 Soluble
188 S H -0.2480 Soluble
189 G H 0.0248 Aggregation-prone
190 L H 0.0341 Aggregation-prone
191 Y H 0.3118 Aggregation-prone
192 S H 0.0000 Buried
193 L H 0.0000 Buried
194 S H 0.0000 Buried
195 S H 0.0000 Buried
196 V H 0.0000 Buried
197 V H 0.0000 Buried
198 T H -0.0890 Soluble
199 V H 0.0000 Buried
200 P H -0.6221 Soluble
201 S H -0.6268 Soluble
202 S H -0.5094 Soluble
203 S H -0.4733 Soluble
204 L H -0.5398 Soluble
205 G H -0.6571 Soluble
206 T H -0.5066 Soluble
207 Q H -0.5992 Soluble
208 T H -0.9467 Soluble
209 Y H 0.0000 Buried
210 I H -1.2419 Soluble
211 C H 0.0000 Buried
212 N H -1.5428 Soluble
213 V H 0.0000 Buried
214 N H -2.3824 Soluble
215 H H 0.0000 Buried
216 K H -2.8607 Soluble
217 P H -1.6522 Soluble
218 S H -1.9369 Soluble
219 N H -2.6965 Soluble
220 T H -2.2494 Soluble
221 K H -2.8156 Soluble
222 V H -1.4655 Soluble
223 D H -2.3615 Soluble
224 K H -2.0563 Soluble
225 R H -2.7273 Soluble
226 V H 0.0000 Buried
227 E H -2.8184 Soluble
228 P H -1.9718 Soluble
229 K H -2.0793 Soluble
230 S H -0.8007 Soluble
231 C H 0.2178 Aggregation-prone
1 D L -1.9293 Soluble
2 I L -1.4277 Soluble
3 Q L -1.6425 Soluble
4 M L 0.0000 Buried
5 T L -0.8167 Soluble
6 Q L -0.6690 Soluble
7 S L -0.4644 Soluble
8 P L -0.4727 Soluble
9 S L -0.5928 Soluble
10 T L -0.4890 Soluble
11 L L -0.4288 Soluble
12 S L -0.9484 Soluble
13 A L -1.1404 Soluble
14 S L -1.0484 Soluble
15 V L -0.2352 Soluble
16 G L -0.8445 Soluble
17 D L -2.0687 Soluble
18 R L -2.4229 Soluble
19 V L 0.0000 Buried
20 T L -0.6519 Soluble
21 I L 0.0000 Buried
22 T L -0.6422 Soluble
23 C L 0.0000 Buried
24 S L -1.3786 Soluble
25 A L 0.0000 Buried
26 S L -1.4497 Soluble
27 S L -1.6745 Soluble
28 R L -2.2191 Soluble
29 V L 0.0000 Buried
37 G L -0.5218 Soluble
38 Y L 0.4440 Aggregation-prone
39 M L 0.0000 Buried
40 H L 0.0000 Buried
41 W L 0.0000 Buried
42 Y L 0.0000 Buried
43 Q L 0.0000 Buried
44 Q L 0.0000 Buried
45 K L -1.7121 Soluble
46 P L -1.3864 Soluble
47 G L -1.7738 Soluble
48 K L -2.5594 Soluble
49 A L -1.6771 Soluble
50 P L 0.0000 Buried
51 K L -1.6411 Soluble
52 L L -0.5448 Soluble
53 L L 0.0000 Buried
54 I L 0.0000 Buried
55 Y L -0.2850 Soluble
56 D L -0.4422 Soluble
57 T L 0.0000 Buried
65 S L -0.9506 Soluble
66 K L -1.6306 Soluble
67 L L -0.5092 Soluble
68 A L -0.5782 Soluble
69 S L -0.5225 Soluble
70 G L -0.5106 Soluble
71 V L 0.0000 Buried
72 P L -0.4259 Soluble
74 S L -0.4837 Soluble
75 R L -0.8726 Soluble
76 F L 0.0000 Buried
77 S L -0.6323 Soluble
78 G L 0.0000 Buried
79 S L -0.8650 Soluble
80 G L -0.8955 Soluble
83 S L -1.1569 Soluble
84 G L -1.5484 Soluble
85 T L -1.7207 Soluble
86 E L -2.3472 Soluble
87 F L 0.0000 Buried
88 T L -0.6846 Soluble
89 L L 0.0000 Buried
90 T L -0.6121 Soluble
91 I L 0.0000 Buried
92 S L -1.4288 Soluble
93 S L -1.2380 Soluble
94 L L 0.0000 Buried
95 Q L -1.1359 Soluble
96 P L -1.9133 Soluble
97 D L -2.5112 Soluble
98 D L 0.0000 Buried
99 F L 0.0000 Buried
100 A L 0.0000 Buried
101 T L -0.5074 Soluble
102 Y L 0.0000 Buried
103 Y L 0.0000 Buried
104 C L 0.0000 Buried
105 F L 0.0000 Buried
106 Q L 0.0000 Buried
107 G L 0.0000 Buried
108 S L -0.1269 Soluble
109 G L -0.2117 Soluble
114 Y L 0.0598 Aggregation-prone
115 P L -0.3414 Soluble
116 F L 0.0000 Buried
117 T L -0.5768 Soluble
118 F L -0.2763 Soluble
119 G L 0.0000 Buried
120 G L -1.1151 Soluble
121 G L -0.7908 Soluble
122 T L 0.0000 Buried
123 K L -0.8816 Soluble
124 V L 0.0000 Buried
125 E L -1.3620 Soluble
126 I L 0.0000 Buried
127 K L -1.5987 Soluble
128 R L -0.9826 Soluble
129 T L 0.0140 Aggregation-prone
130 V L 0.7348 Aggregation-prone
131 A L 0.1973 Aggregation-prone
132 A L 0.0528 Aggregation-prone
133 P L 0.0000 Buried
134 S L -0.1910 Soluble
135 V L 0.0000 Buried
136 F L 0.0000 Buried
137 I L 0.0000 Buried
138 F L 0.0000 Buried
139 P L -0.6562 Soluble
140 P L -0.7982 Soluble
141 S L -1.6764 Soluble
142 D L -2.7727 Soluble
143 E L -2.5440 Soluble
144 Q L 0.0000 Buried
145 L L -2.2371 Soluble
146 K L -2.7524 Soluble
147 S L -1.7380 Soluble
148 G L -1.4660 Soluble
149 T L -1.2070 Soluble
150 A L 0.0000 Buried
151 S L 0.0000 Buried
152 V L 0.0000 Buried
153 V L 0.0000 Buried
154 C L 0.0000 Buried
155 L L 0.0000 Buried
156 L L 0.0000 Buried
157 N L 0.0000 Buried
158 N L -0.8015 Soluble
159 F L 0.0000 Buried
160 Y L -0.9949 Soluble
161 P L -1.6607 Soluble
162 R L -2.8292 Soluble
163 E L -3.1949 Soluble
164 A L -2.2740 Soluble
165 K L -2.1531 Soluble
166 V L 0.0000 Buried
167 Q L -0.7872 Soluble
168 W L 0.0000 Buried
169 K L -0.6184 Soluble
170 V L 0.0000 Buried
171 D L -1.8516 Soluble
172 N L -1.5417 Soluble
173 A L -0.2696 Soluble
174 L L 0.6858 Aggregation-prone
175 Q L -0.3350 Soluble
176 S L -0.6942 Soluble
177 G L -1.2526 Soluble
178 N L -1.5460 Soluble
179 S L -1.4431 Soluble
180 Q L -1.4305 Soluble
181 E L -1.8717 Soluble
182 S L -0.9564 Soluble
183 V L -0.8053 Soluble
184 T L -1.0418 Soluble
185 E L -2.0030 Soluble
186 Q L 0.0000 Buried
187 D L -2.0461 Soluble
188 S L -2.3690 Soluble
189 K L -2.7058 Soluble
190 D L -1.9405 Soluble
191 S L 0.0000 Buried
192 T L 0.0000 Buried
193 Y L 0.0000 Buried
194 S L 0.0000 Buried
195 L L 0.0000 Buried
196 S L 0.0000 Buried
197 S L 0.0000 Buried
198 T L -0.7472 Soluble
199 L L 0.0000 Buried
200 T L -0.6376 Soluble
201 L L -0.8688 Soluble
202 S L -1.0775 Soluble
203 K L -2.1859 Soluble
204 A L -1.9270 Soluble
205 D L -2.4666 Soluble
206 Y L 0.0000 Buried
207 E L -3.6487 Soluble
208 K L -3.6252 Soluble
209 H L -2.9994 Soluble
210 K L -2.9985 Soluble
211 V L -1.1862 Soluble
212 Y L 0.0000 Buried
213 A L 0.0000 Buried
214 C L 0.0000 Buried
215 E L -0.8329 Soluble
216 V L 0.0000 Buried
217 T L -1.1561 Soluble
218 H L 0.0000 Buried
219 Q L -1.5924 Soluble
220 G L -0.2641 Soluble
221 L L -0.1325 Soluble
222 S L -0.4526 Soluble
223 S L -0.3856 Soluble
224 P L -0.4746 Soluble
225 V L 0.1870 Aggregation-prone
226 T L -0.2798 Soluble
227 K L -0.4630 Soluble
228 S L -0.5174 Soluble
229 F L 0.0000 Buried
230 N L -1.7344 Soluble
231 R L -2.3951 Soluble
232 G L -2.0581 Soluble
233 E L -2.0257 Soluble
234 C L -0.6587 Soluble

3D Structure — colored by A4D score

Sequence - click residue to focus in viewer  |  colored by A4D score
Load structure to view sequence…
Downloads
Color Legend (B-factor = A4D Score)
Score > 1.5 — highly aggregation-prone
Score 0.5–1.5 — aggregation-prone
Score ≈ 0 — buried
Score −1 to −0.5 — soluble
Score < −2.5 — highly soluble
pH Structure
Load structure at specific pH condition
A4D Score Threshold
Highlight residues > threshold in the sequence panel
CDR Regions
HCDR1
HCDR2
HCDR3
LCDR1
LCDR2
LCDR3
Display Options

pH-Dependent Aggregation Profiles

A4D scores calculated across 11 pH conditions (4.0–9.0, step 0.5). Click a row to view the structure at that pH. The input structure is globular — max score is recommended for pH analysis.

pH Avg A4D Score Max A4D Score Downloads
4.0 -0.7334 5.1547 CSV PDB
4.5 -0.7763 5.1547 CSV PDB
5.0 -0.8257 5.1547 CSV PDB
5.5 -0.8716 5.1547 CSV PDB
6.0 -0.9026 5.1547 CSV PDB
6.5 -0.9095 5.1547 CSV PDB
7.0 -0.8925 5.1547 CSV PDB
7.5 -0.8596 5.1547 CSV PDB
8.0 -0.8178 5.1547 CSV PDB
8.5 -0.769 5.1547 CSV PDB
9.0 -0.7124 5.1547 CSV PDB
Average A4D Score vs pH
Max A4D Score vs pH