Venanprubart / 8f6o

A4DAB291_8f6o_A_B | Source PDB: 8f6o | Chains: A, B | Done
100
Yes
10 Å
Yes
Avg A4D Score
-0.6681
Max Score
1.923
Min Score
-3.4229
Total Score
-293.96
Score CDR
-0.1069
Score non-CDR
-0.7449

Calculation Parameters

Chain Sequence(s) VQLVQSGAEVKKPGASVKVSCKASGFSLSSYGVSWVRQAPGQGLEWMGAISYDGITYYASWAKSRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARGDYYDDYVYVYALDIWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESKEIVLTQSPGTLSLSPGERATLSCQASQSISTALAWYQQKPGQAPRLLIYAASTLASGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQGYSSSNLDNVFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC input.pdb
Selected Chain(s) A (Heavy), B (Light)
Distance of Aggregation 10 Å
FoldX Energy Minimization Yes
pH Calculations Yes
Downloads Download all data (.tar.gz)

Aggrescan4D Profile

Aggregation-prone (score > 0)
Soluble (score < 0)
Buried (score = 0)

Per-Residue A4D Scores

Download CSV
Minimum Score -3.4229
Maximum Score 1.923
Average Score -0.6681
Total Score -293.9601

Residues with A4D score > 0.0 are highlighted as aggregation-prone.

Index Residue Chain A4D Score Classification
2 V A 1.0836 Aggregation-prone
3 Q A -0.4177 Soluble
4 L A 0.0000 Buried
5 V A -0.2124 Soluble
6 Q A 0.0000 Buried
7 S A -0.5954 Soluble
8 G A -0.4350 Soluble
9 A A -0.0724 Soluble
11 E A -0.3385 Soluble
12 V A 0.0900 Aggregation-prone
13 K A -1.3378 Soluble
14 K A -2.3378 Soluble
15 P A -2.2305 Soluble
16 G A -1.5688 Soluble
17 A A -1.2483 Soluble
18 S A -1.3148 Soluble
19 V A 0.0000 Buried
20 K A -1.9797 Soluble
21 V A 0.0000 Buried
22 S A -0.5992 Soluble
23 C A 0.0000 Buried
24 K A -0.9398 Soluble
25 A A 0.0000 Buried
26 S A -0.2477 Soluble
27 G A 0.0424 Aggregation-prone
28 F A 0.1520 Aggregation-prone
29 S A -0.0829 Soluble
30 L A 0.0000 Buried
35 S A -0.7631 Soluble
36 S A -0.4131 Soluble
37 Y A -0.0846 Soluble
38 G A 0.0000 Buried
39 V A 0.0000 Buried
40 S A 0.0000 Buried
41 W A 0.0000 Buried
42 V A 0.0000 Buried
43 R A -0.4774 Soluble
44 Q A -0.7425 Soluble
45 A A -1.0344 Soluble
46 P A -0.8573 Soluble
47 G A -1.2929 Soluble
48 Q A -1.8149 Soluble
49 G A -1.2554 Soluble
50 L A 0.0000 Buried
51 E A -1.2677 Soluble
52 W A 0.0000 Buried
53 M A 0.0000 Buried
54 G A 0.0000 Buried
55 A A 0.0000 Buried
56 I A 0.0000 Buried
57 S A 0.0000 Buried
58 Y A -0.2562 Soluble
59 D A -1.1686 Soluble
63 G A -0.0314 Soluble
64 I A 1.5035 Aggregation-prone
65 T A 0.8752 Aggregation-prone
66 Y A 0.3045 Aggregation-prone
67 Y A -0.6756 Soluble
68 A A 0.0000 Buried
69 S A -1.3454 Soluble
70 W A -0.7928 Soluble
71 A A 0.0000 Buried
72 K A -1.8166 Soluble
74 S A -1.0820 Soluble
75 R A -0.9136 Soluble
76 V A 0.0000 Buried
77 T A -0.7278 Soluble
78 M A 0.0000 Buried
79 T A -0.2062 Soluble
80 R A -0.9380 Soluble
81 D A -1.3235 Soluble
82 T A -0.8660 Soluble
83 S A -0.6697 Soluble
84 T A -0.6647 Soluble
85 S A -0.8024 Soluble
86 T A 0.0000 Buried
87 V A 0.0000 Buried
88 Y A -0.6091 Soluble
89 M A 0.0000 Buried
90 E A -1.3176 Soluble
91 L A 0.0000 Buried
92 S A -1.0159 Soluble
93 S A -1.1304 Soluble
94 L A 0.0000 Buried
95 R A -2.8160 Soluble
96 S A -2.2290 Soluble
97 E A -2.4140 Soluble
98 D A 0.0000 Buried
99 T A -0.8143 Soluble
100 A A 0.0000 Buried
101 V A 0.2221 Aggregation-prone
102 Y A 0.0000 Buried
103 Y A 0.0000 Buried
104 C A 0.0000 Buried
105 A A 0.0000 Buried
106 R A 0.0000 Buried
107 G A 0.0000 Buried
108 D A -0.1738 Soluble
109 Y A 0.3592 Aggregation-prone
110 Y A 0.2092 Aggregation-prone
111 D A -0.0743 Soluble
111A D A -0.7123 Soluble
111B Y A 1.2434 Aggregation-prone
112B V A 1.9230 Aggregation-prone
112A Y A 1.7296 Aggregation-prone
112 V A 0.0000 Buried
113 Y A 0.0000 Buried
114 A A 0.0000 Buried
115 L A 0.0000 Buried
116 D A -0.5039 Soluble
117 I A -0.0290 Soluble
118 W A -0.3660 Soluble
119 G A 0.0000 Buried
120 Q A -1.2379 Soluble
121 G A -0.6231 Soluble
122 T A 0.0000 Buried
123 L A 0.2657 Aggregation-prone
124 V A 0.0000 Buried
125 T A 0.0000 Buried
126 V A 0.0000 Buried
127 S A -1.3361 Soluble
128 S A -1.1348 Soluble
129 A A -0.6661 Soluble
130 S A -0.7375 Soluble
131 T A -0.8307 Soluble
132 K A -1.5507 Soluble
133 G A -1.5613 Soluble
134 P A -0.7778 Soluble
135 S A -0.6067 Soluble
136 V A 0.0000 Buried
137 F A 0.0000 Buried
138 P A -1.3114 Soluble
139 L A 0.0000 Buried
140 A A -0.9282 Soluble
141 P A -0.7889 Soluble
142 C A -0.9310 Soluble
143 S A -1.3070 Soluble
144 R A -2.1555 Soluble
145 S A -1.4536 Soluble
146 T A -1.0913 Soluble
147 S A -1.1743 Soluble
148 E A -1.8844 Soluble
149 S A -1.0356 Soluble
150 T A -0.8914 Soluble
151 A A 0.0000 Buried
152 A A 0.0000 Buried
153 L A 0.0000 Buried
154 G A 0.0000 Buried
155 C A 0.0000 Buried
156 L A 0.0000 Buried
157 V A 0.0000 Buried
158 K A 0.0000 Buried
159 D A -0.5028 Soluble
160 Y A 0.0000 Buried
161 F A 0.0000 Buried
162 P A 0.0000 Buried
163 E A -0.4955 Soluble
164 P A -0.8348 Soluble
165 V A -0.8069 Soluble
166 T A -0.6675 Soluble
167 V A -0.4277 Soluble
168 S A -0.5385 Soluble
169 W A 0.0000 Buried
170 N A -1.0420 Soluble
171 S A -0.8015 Soluble
172 G A -0.6135 Soluble
173 A A -0.2792 Soluble
174 L A -0.1100 Soluble
175 T A -0.2075 Soluble
176 S A -0.1960 Soluble
177 G A -0.2810 Soluble
178 V A 0.1490 Aggregation-prone
179 H A -0.3267 Soluble
180 T A 0.0120 Aggregation-prone
181 F A 0.0000 Buried
182 P A -0.4853 Soluble
183 A A 0.0695 Aggregation-prone
184 V A 0.2326 Aggregation-prone
185 L A 1.0473 Aggregation-prone
186 Q A 0.1068 Aggregation-prone
187 S A -0.0909 Soluble
188 S A -0.2318 Soluble
189 G A 0.0150 Aggregation-prone
190 L A -0.0759 Soluble
191 Y A 0.0000 Buried
192 S A 0.0000 Buried
193 L A 0.0000 Buried
194 S A 0.0000 Buried
195 S A 0.0000 Buried
196 V A 0.0000 Buried
197 V A 0.0000 Buried
198 T A -0.1197 Soluble
199 V A 0.0000 Buried
200 P A -0.6578 Soluble
201 S A -0.9773 Soluble
202 S A -0.7121 Soluble
203 S A -0.6995 Soluble
204 L A -0.8584 Soluble
205 G A -1.0377 Soluble
206 T A -0.8463 Soluble
207 K A -1.5427 Soluble
208 T A -1.4118 Soluble
209 Y A 0.0000 Buried
210 T A -1.9242 Soluble
211 C A 0.0000 Buried
212 N A -1.8144 Soluble
213 V A 0.0000 Buried
214 D A -2.1163 Soluble
215 H A 0.0000 Buried
216 K A -2.7683 Soluble
217 P A -1.5878 Soluble
218 S A -1.9113 Soluble
219 N A -2.6044 Soluble
220 T A -2.1863 Soluble
221 K A -2.7916 Soluble
222 V A -1.9380 Soluble
223 D A -2.8771 Soluble
224 K A -2.4073 Soluble
225 R A -2.9702 Soluble
226 V A 0.0000 Buried
227 E A -2.9604 Soluble
228 S A -2.0105 Soluble
229 K A -2.2581 Soluble
1 E B -2.1624 Soluble
2 I B 0.0000 Buried
3 V B 0.3143 Aggregation-prone
4 L B 0.0000 Buried
5 T B -0.1884 Soluble
6 Q B -0.5098 Soluble
7 S B -0.6847 Soluble
8 P B -0.5874 Soluble
9 G B -0.8066 Soluble
10 T B -0.4839 Soluble
11 L B -0.2595 Soluble
12 S B -0.3848 Soluble
13 L B -0.6901 Soluble
14 S B -1.0907 Soluble
15 P B -1.7667 Soluble
16 G B -2.0249 Soluble
17 E B -2.6240 Soluble
18 R B -3.0435 Soluble
19 A B 0.0000 Buried
20 T B -0.5463 Soluble
21 L B 0.0000 Buried
22 S B -0.6945 Soluble
23 C B 0.0000 Buried
24 Q B -1.1963 Soluble
25 A B 0.0000 Buried
26 S B -0.8501 Soluble
27 Q B -1.4576 Soluble
28 S B -1.0462 Soluble
29 I B 0.0000 Buried
36 S B -0.5547 Soluble
37 T B -0.3630 Soluble
38 A B 0.0000 Buried
39 L B 0.0000 Buried
40 A B 0.0000 Buried
41 W B 0.0000 Buried
42 Y B 0.0000 Buried
43 Q B 0.0000 Buried
44 Q B 0.0000 Buried
45 K B -1.5147 Soluble
46 P B -1.4490 Soluble
47 G B -1.3222 Soluble
48 Q B -2.0419 Soluble
49 A B -1.2856 Soluble
50 P B 0.0000 Buried
51 R B -1.2327 Soluble
52 L B 0.0000 Buried
53 L B 0.0000 Buried
54 I B 0.0000 Buried
55 Y B 0.3021 Aggregation-prone
56 A B 0.0466 Aggregation-prone
57 A B 0.0000 Buried
65 S B -0.2144 Soluble
66 T B 0.1813 Aggregation-prone
67 L B 0.2119 Aggregation-prone
68 A B -0.1811 Soluble
69 S B -0.3103 Soluble
70 G B -0.5977 Soluble
71 I B -0.5282 Soluble
72 P B -0.9807 Soluble
74 D B -2.0896 Soluble
75 R B -1.9842 Soluble
76 F B 0.0000 Buried
77 S B -0.6940 Soluble
78 G B -0.2679 Soluble
79 S B -0.7526 Soluble
80 G B -1.0750 Soluble
83 S B -0.9865 Soluble
84 G B -1.1371 Soluble
85 T B -1.5711 Soluble
86 D B -2.3039 Soluble
87 F B 0.0000 Buried
88 T B -0.7271 Soluble
89 L B 0.0000 Buried
90 T B -0.8371 Soluble
91 I B 0.0000 Buried
92 S B -2.5017 Soluble
93 R B -3.3527 Soluble
94 L B 0.0000 Buried
95 E B -2.4636 Soluble
96 P B -1.7224 Soluble
97 E B -2.2626 Soluble
98 D B 0.0000 Buried
99 F B -0.6613 Soluble
100 A B 0.0000 Buried
101 V B -0.1034 Soluble
102 Y B 0.0000 Buried
103 Y B 0.0000 Buried
104 C B 0.0000 Buried
105 Q B 0.0000 Buried
106 Q B 0.0000 Buried
107 G B 0.0000 Buried
108 Y B 0.9645 Aggregation-prone
109 S B 0.0454 Aggregation-prone
110 S B -0.3965 Soluble
112 S B -1.0653 Soluble
113 N B -2.1636 Soluble
114 L B 0.0000 Buried
115 D B -1.9869 Soluble
116 N B -1.2206 Soluble
117 V B 0.0000 Buried
118 F B 0.0000 Buried
119 G B 0.0000 Buried
120 G B -0.8126 Soluble
121 G B -0.7121 Soluble
122 T B 0.0000 Buried
123 K B -0.5987 Soluble
124 V B 0.0000 Buried
125 E B 0.0000 Buried
126 I B -0.5225 Soluble
127 K B -1.0761 Soluble
128 R B -0.8918 Soluble
129 T B -0.0629 Soluble
130 V B 0.3001 Aggregation-prone
131 A B 0.0802 Aggregation-prone
132 A B -0.1611 Soluble
133 P B 0.0000 Buried
134 S B -0.1591 Soluble
135 V B 0.0000 Buried
136 F B -0.2428 Soluble
137 I B 0.0000 Buried
138 F B 0.0000 Buried
139 P B -0.3546 Soluble
140 P B -0.8120 Soluble
141 S B -1.6742 Soluble
142 D B -3.0465 Soluble
143 E B -3.2349 Soluble
144 Q B 0.0000 Buried
145 L B -2.1966 Soluble
146 K B -2.9475 Soluble
147 S B -1.8329 Soluble
148 G B -1.3658 Soluble
149 T B -1.0271 Soluble
150 A B 0.0000 Buried
151 S B 0.0000 Buried
152 V B 0.0000 Buried
153 V B 0.0000 Buried
154 C B 0.0000 Buried
155 L B 0.0000 Buried
156 L B 0.0000 Buried
157 N B 0.0000 Buried
158 N B -0.8739 Soluble
159 F B 0.0000 Buried
160 Y B 0.0000 Buried
161 P B -1.6710 Soluble
162 R B -2.9184 Soluble
163 E B -3.1680 Soluble
164 A B -2.2497 Soluble
165 K B -2.3665 Soluble
166 V B -0.9241 Soluble
167 Q B -0.5390 Soluble
168 W B 0.0000 Buried
169 K B -0.6225 Soluble
170 V B 0.0000 Buried
171 D B -1.8761 Soluble
172 N B -1.4572 Soluble
173 A B -0.3733 Soluble
174 L B 0.5350 Aggregation-prone
175 Q B -0.1615 Soluble
176 S B -0.4255 Soluble
177 G B -0.9699 Soluble
178 N B -0.8461 Soluble
179 S B -1.3554 Soluble
180 Q B -1.8906 Soluble
181 E B -1.9686 Soluble
182 S B 0.0000 Buried
183 V B -0.8505 Soluble
184 T B -1.2094 Soluble
185 E B -2.2773 Soluble
186 Q B -1.8451 Soluble
187 D B -1.9359 Soluble
188 S B -1.9001 Soluble
189 K B -2.2157 Soluble
190 D B -1.6541 Soluble
191 S B -1.5851 Soluble
192 T B 0.0000 Buried
193 Y B 0.0000 Buried
194 S B 0.0000 Buried
195 L B 0.0000 Buried
196 S B 0.0000 Buried
197 S B 0.0000 Buried
198 T B -0.7834 Soluble
199 L B 0.0000 Buried
200 T B -0.4079 Soluble
201 L B -0.4588 Soluble
202 S B -0.9299 Soluble
203 K B -2.1204 Soluble
204 A B -1.7230 Soluble
205 D B -2.0661 Soluble
206 Y B 0.0000 Buried
207 E B -3.4229 Soluble
208 K B -3.3591 Soluble
209 H B -2.5127 Soluble
210 K B -2.4099 Soluble
211 V B -1.2887 Soluble
212 Y B 0.0000 Buried
213 A B 0.0000 Buried
214 C B 0.0000 Buried
215 E B -0.6214 Soluble
216 V B 0.0000 Buried
217 T B -1.1833 Soluble
218 H B 0.0000 Buried
219 Q B -1.7681 Soluble
220 G B -0.4557 Soluble
221 L B -0.2649 Soluble
222 S B -0.4688 Soluble
223 S B -0.4090 Soluble
224 P B -0.5310 Soluble
225 V B 0.0476 Aggregation-prone
226 T B -0.4529 Soluble
227 K B -0.7603 Soluble
228 S B -0.6776 Soluble
229 F B 0.0000 Buried
230 N B -1.6157 Soluble
231 R B -2.0002 Soluble
232 G B -1.7294 Soluble
233 E B -2.0622 Soluble
234 C B -0.8099 Soluble

3D Structure — colored by A4D score

Sequence - click residue to focus in viewer  |  colored by A4D score
Load structure to view sequence…
Color Legend (B-factor = A4D Score)
Score > 1.5 — highly aggregation-prone
Score 0.5–1.5 — aggregation-prone
Score ≈ 0 — buried
Score −1 to −0.5 — soluble
Score < −2.5 — highly soluble
pH Structure
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A4D Score Threshold
Highlight residues > threshold in the sequence panel
CDR Regions
HCDR1
HCDR2
HCDR3
LCDR1
LCDR2
LCDR3
Display Options

pH-Dependent Aggregation Profiles

A4D scores calculated across 11 pH conditions (4.0–9.0, step 0.5). Click a row to view the structure at that pH. The input structure is globular — max score is recommended for pH analysis.

pH Avg A4D Score Max A4D Score Downloads
4.0 -0.6969 3.1227 CSV PDB
4.5 -0.7455 3.036 CSV PDB
5.0 -0.8037 2.9256 CSV PDB
5.5 -0.8606 2.8044 CSV PDB
6.0 -0.9042 2.6793 CSV PDB
6.5 -0.9259 2.5529 CSV PDB
7.0 -0.9251 2.4265 CSV PDB
7.5 -0.9087 2.3007 CSV PDB
8.0 -0.8833 2.1776 CSV PDB
8.5 -0.8515 2.0619 CSV PDB
9.0 -0.8129 1.9645 CSV PDB
Average A4D Score vs pH
Max A4D Score vs pH