Anbenitamab / 5vsh

A4DAB016_5vsh_A_B | Source PDB: 5vsh | Chains: A, B | Done
92.92
Yes
10 Å
Yes
Avg A4D Score
-0.6486
Max Score
1.6809
Min Score
-3.4415
Total Score
-276.96
Score CDR
-0.1837
Score non-CDR
-0.7048

Calculation Parameters

Chain Sequence(s) EVQLVESGGGLVQPGGSLRLSCAASGFTFTDYTMDWVRYAPGKGLEWVADVNPNSGGSIYNQRFKGRFTLSVDRSKNTLYLQMNSLRAEDTAVYYCARNLGPSFYFDYWGRGTLVTVSSASTKGPSVFPLAPCGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPDIQMTQSPSSLSASVGDRVTITCKASQDVSIGVAWYQRKPGDAPKLLIYSASYRYTGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYYIYPYTFGQGTKVEIKRTVAAPSVFIFPPSKEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE input.pdb
Selected Chain(s) A (Heavy), B (Light)
Distance of Aggregation 10 Å
FoldX Energy Minimization Yes
pH Calculations Yes
Downloads Download all data (.tar.gz)

Aggrescan4D Profile

Aggregation-prone (score > 0)
Soluble (score < 0)
Buried (score = 0)

Per-Residue A4D Scores

Download CSV
Minimum Score -3.4415
Maximum Score 1.6809
Average Score -0.6486
Total Score -276.9583

Residues with A4D score > 0.0 are highlighted as aggregation-prone.

Index Residue Chain A4D Score Classification
1 E A -2.0890 Soluble
2 V A -1.1504 Soluble
3 Q A -1.3080 Soluble
4 L A 0.0000 Buried
5 V A 0.8531 Aggregation-prone
6 E A -0.0411 Soluble
7 S A -0.3623 Soluble
8 G A -1.0727 Soluble
9 G A -0.6196 Soluble
11 G A -0.3167 Soluble
12 L A -0.1653 Soluble
13 V A 0.0000 Buried
14 Q A -1.7237 Soluble
15 P A -1.8669 Soluble
16 G A -1.5064 Soluble
17 G A 0.0000 Buried
18 S A -1.3392 Soluble
19 L A -1.3009 Soluble
20 R A -2.2850 Soluble
21 L A 0.0000 Buried
22 S A -0.4516 Soluble
23 C A 0.0000 Buried
24 A A -0.1387 Soluble
25 A A 0.0000 Buried
26 S A -0.7843 Soluble
27 G A -1.2436 Soluble
28 F A -0.6711 Soluble
29 T A -0.5894 Soluble
30 F A 0.0000 Buried
35 T A -1.7344 Soluble
36 D A -1.7440 Soluble
37 Y A -0.3899 Soluble
38 T A -0.2200 Soluble
39 M A 0.0000 Buried
40 D A 0.0000 Buried
41 W A 0.0000 Buried
42 V A 0.0000 Buried
43 R A 0.0000 Buried
44 Y A -0.2218 Soluble
45 A A 0.0000 Buried
46 P A -0.9640 Soluble
47 G A -1.5704 Soluble
48 K A -2.2371 Soluble
49 G A -1.3839 Soluble
50 L A 0.0000 Buried
51 E A -0.4070 Soluble
52 W A 0.0000 Buried
53 V A 0.0000 Buried
54 A A 0.0000 Buried
55 D A 0.0000 Buried
56 V A 0.0000 Buried
57 N A -1.1195 Soluble
58 P A 0.0000 Buried
59 N A -2.2335 Soluble
62 S A -1.3061 Soluble
63 G A -1.2259 Soluble
64 G A -0.5393 Soluble
65 S A 0.3661 Aggregation-prone
66 I A 1.1087 Aggregation-prone
67 Y A -0.3127 Soluble
68 N A 0.0000 Buried
69 Q A -2.4929 Soluble
70 R A -2.9733 Soluble
71 F A 0.0000 Buried
72 K A -2.6764 Soluble
74 G A -1.8429 Soluble
75 R A -1.6712 Soluble
76 F A 0.0000 Buried
77 T A -0.8572 Soluble
78 L A 0.0000 Buried
79 S A -0.3846 Soluble
80 V A -1.1164 Soluble
81 D A -2.0089 Soluble
82 R A -2.7230 Soluble
83 S A -1.9858 Soluble
84 K A -2.5772 Soluble
85 N A -1.9002 Soluble
86 T A 0.0000 Buried
87 L A 0.0000 Buried
88 Y A -0.6614 Soluble
89 L A 0.0000 Buried
90 Q A -1.6578 Soluble
91 M A 0.0000 Buried
92 N A -1.3747 Soluble
93 S A -1.2044 Soluble
94 L A 0.0000 Buried
95 R A -2.7082 Soluble
96 A A -1.8983 Soluble
97 E A -2.3622 Soluble
98 D A 0.0000 Buried
99 T A -0.7114 Soluble
100 A A 0.0000 Buried
101 V A 0.2186 Aggregation-prone
102 Y A 0.0000 Buried
103 Y A 0.0000 Buried
104 C A 0.0000 Buried
105 A A 0.0000 Buried
106 R A 0.0000 Buried
107 N A 0.0000 Buried
108 L A 1.1937 Aggregation-prone
109 G A 0.2352 Aggregation-prone
110 P A 0.3650 Aggregation-prone
112 S A 0.7835 Aggregation-prone
113 F A 0.9526 Aggregation-prone
114 Y A 0.7328 Aggregation-prone
115 F A 0.0000 Buried
116 D A 0.1462 Aggregation-prone
117 Y A 0.1869 Aggregation-prone
118 W A -0.4061 Soluble
119 G A 0.0000 Buried
120 R A -1.9911 Soluble
121 G A 0.0000 Buried
122 T A 0.0000 Buried
123 L A 0.0553 Aggregation-prone
124 V A 0.0000 Buried
125 T A -0.5182 Soluble
126 V A 0.0000 Buried
127 S A -0.8668 Soluble
128 S A -0.7620 Soluble
129 A A -0.5181 Soluble
130 S A -0.6279 Soluble
131 T A -0.7253 Soluble
132 K A -1.4162 Soluble
133 G A -1.5154 Soluble
134 P A 0.0000 Buried
135 S A -0.3853 Soluble
136 V A 0.0000 Buried
137 F A 0.0000 Buried
138 P A -1.0458 Soluble
139 L A 0.0000 Buried
140 A A -0.4185 Soluble
141 P A -0.0327 Soluble
142 C A -0.2021 Soluble
143 G A -0.7832 Soluble
144 G A -0.8571 Soluble
145 T A -0.6102 Soluble
146 A A -0.3006 Soluble
147 A A 0.0000 Buried
148 L A 0.0000 Buried
149 G A 0.0000 Buried
150 C A 0.0000 Buried
151 L A 0.0000 Buried
152 V A 0.0000 Buried
153 K A -0.3747 Soluble
154 D A -0.5545 Soluble
155 Y A 0.0000 Buried
156 F A 0.0000 Buried
157 P A 0.0000 Buried
158 E A -0.4708 Soluble
159 P A -0.7214 Soluble
160 V A -0.4480 Soluble
161 T A -0.5055 Soluble
162 V A -0.1048 Soluble
163 S A -0.3782 Soluble
164 W A 0.0000 Buried
165 N A -0.6727 Soluble
166 S A -0.6673 Soluble
167 G A -0.5736 Soluble
168 A A -0.2406 Soluble
169 L A 0.0252 Aggregation-prone
170 T A -0.1594 Soluble
171 S A -0.1624 Soluble
172 G A -0.1819 Soluble
173 V A 0.1885 Aggregation-prone
174 H A -0.2975 Soluble
175 T A 0.0234 Aggregation-prone
176 F A 0.0000 Buried
177 P A -0.3420 Soluble
178 A A 0.4471 Aggregation-prone
179 V A 0.6708 Aggregation-prone
180 L A 1.4281 Aggregation-prone
181 Q A 0.4008 Aggregation-prone
182 S A -0.0399 Soluble
183 S A -0.2169 Soluble
184 G A 0.0538 Aggregation-prone
185 L A 0.0635 Aggregation-prone
186 Y A 0.4371 Aggregation-prone
187 S A 0.0000 Buried
188 L A 0.0000 Buried
189 S A 0.0000 Buried
190 S A 0.0000 Buried
191 V A 0.0000 Buried
192 V A 0.0000 Buried
193 T A -0.1201 Soluble
194 V A 0.0000 Buried
195 P A -0.5071 Soluble
196 S A -0.5379 Soluble
197 S A -0.6177 Soluble
198 S A 0.0000 Buried
199 L A -0.6838 Soluble
200 G A -0.9584 Soluble
201 T A -0.7215 Soluble
202 Q A -1.0458 Soluble
203 T A -1.0423 Soluble
204 Y A 0.0000 Buried
205 I A -1.0532 Soluble
206 C A 0.0000 Buried
207 N A -1.3954 Soluble
208 V A 0.0000 Buried
209 N A -1.8089 Soluble
210 H A 0.0000 Buried
211 K A -2.7405 Soluble
212 P A -1.6561 Soluble
213 S A -1.8850 Soluble
214 N A -2.5964 Soluble
215 T A -2.0058 Soluble
216 K A -2.6696 Soluble
217 V A -1.5852 Soluble
218 D A -2.3943 Soluble
219 K A -1.9690 Soluble
220 K A -2.2190 Soluble
221 V A 0.0000 Buried
222 E A -2.2122 Soluble
223 P A -1.1080 Soluble
1 D B -2.0329 Soluble
2 I B 0.0000 Buried
3 Q B -2.2345 Soluble
4 M B 0.0000 Buried
5 T B -1.4194 Soluble
6 Q B 0.0000 Buried
7 S B -0.7120 Soluble
8 P B -0.4789 Soluble
9 S B -0.7688 Soluble
10 S B -0.6739 Soluble
11 L B -0.4723 Soluble
12 S B -0.7398 Soluble
13 A B -0.9664 Soluble
14 S B -0.8470 Soluble
15 V B -0.0752 Soluble
16 G B -0.8889 Soluble
17 D B -1.9003 Soluble
18 R B -2.3361 Soluble
19 V B 0.0000 Buried
20 T B -0.6472 Soluble
21 I B 0.0000 Buried
22 T B -0.8742 Soluble
23 C B 0.0000 Buried
24 K B -2.7373 Soluble
25 A B 0.0000 Buried
26 S B -2.2503 Soluble
27 Q B -2.7426 Soluble
28 D B -2.6804 Soluble
29 V B 0.0000 Buried
36 S B -0.6073 Soluble
37 I B 0.5209 Aggregation-prone
38 G B 0.0000 Buried
39 V B 0.0000 Buried
40 A B 0.0000 Buried
41 W B 0.0000 Buried
42 Y B 0.0000 Buried
43 Q B 0.0000 Buried
44 R B -1.3743 Soluble
45 K B -1.9294 Soluble
46 P B -1.5827 Soluble
47 G B -1.7454 Soluble
48 D B -2.7821 Soluble
49 A B -1.7321 Soluble
50 P B 0.0000 Buried
51 K B -1.2999 Soluble
52 L B 0.0000 Buried
53 L B 0.0000 Buried
54 I B 0.0000 Buried
55 Y B 0.6922 Aggregation-prone
56 S B 0.6632 Aggregation-prone
57 A B 0.0000 Buried
65 S B 0.2497 Aggregation-prone
66 Y B 0.8756 Aggregation-prone
67 R B -0.5287 Soluble
68 Y B -0.2270 Soluble
69 T B -0.3322 Soluble
70 G B -0.6507 Soluble
71 V B 0.0000 Buried
72 P B -0.5593 Soluble
74 S B -0.6821 Soluble
75 R B -0.7910 Soluble
76 F B 0.0000 Buried
77 S B -0.3877 Soluble
78 G B -0.2140 Soluble
79 S B -0.3758 Soluble
80 G B -0.8324 Soluble
83 S B -0.9283 Soluble
84 G B -1.6569 Soluble
85 T B -2.2438 Soluble
86 D B -2.6456 Soluble
87 F B 0.0000 Buried
88 T B -0.8096 Soluble
89 L B 0.0000 Buried
90 T B -0.6067 Soluble
91 I B 0.0000 Buried
92 S B -1.3648 Soluble
93 S B -1.2087 Soluble
94 L B 0.0000 Buried
95 Q B -0.8822 Soluble
96 P B -1.4359 Soluble
97 E B -1.5494 Soluble
98 D B 0.0000 Buried
99 F B 0.0000 Buried
100 A B 0.0000 Buried
101 T B -0.8380 Soluble
102 Y B 0.0000 Buried
103 Y B 0.0000 Buried
104 C B 0.0000 Buried
105 Q B 0.0000 Buried
106 Q B 0.0000 Buried
107 Y B 0.0000 Buried
108 Y B 1.6809 Aggregation-prone
109 I B 1.3644 Aggregation-prone
114 Y B 0.9032 Aggregation-prone
115 P B 0.0000 Buried
116 Y B 0.5232 Aggregation-prone
117 T B -0.2687 Soluble
118 F B -0.2978 Soluble
119 G B 0.0000 Buried
120 Q B -1.7168 Soluble
121 G B 0.0000 Buried
122 T B 0.0000 Buried
123 K B -1.2784 Soluble
124 V B 0.0000 Buried
125 E B -1.1460 Soluble
126 I B 0.0000 Buried
127 K B -1.1569 Soluble
128 R B -0.6827 Soluble
129 T B 0.0539 Aggregation-prone
130 V B 0.5319 Aggregation-prone
131 A B 0.2098 Aggregation-prone
132 A B -0.0704 Soluble
133 P B 0.0000 Buried
134 S B -0.1076 Soluble
135 V B -0.0236 Soluble
136 F B -0.0008 Soluble
137 I B 0.0000 Buried
138 F B 0.0000 Buried
139 P B -0.5929 Soluble
140 P B 0.0000 Buried
141 S B -1.3722 Soluble
142 K B -2.5514 Soluble
143 E B -2.3515 Soluble
144 Q B 0.0000 Buried
145 L B -1.9962 Soluble
146 K B -2.5613 Soluble
147 S B -1.6114 Soluble
148 G B -1.2029 Soluble
149 T B -0.8328 Soluble
150 A B 0.0000 Buried
151 S B 0.0000 Buried
152 V B 0.0000 Buried
153 V B 0.0000 Buried
154 C B 0.0000 Buried
155 L B 0.0000 Buried
156 L B 0.0000 Buried
157 N B 0.0000 Buried
158 N B -0.8871 Soluble
159 F B 0.0000 Buried
160 Y B 0.0000 Buried
161 P B -1.6514 Soluble
162 R B -2.8135 Soluble
163 E B -3.2225 Soluble
164 A B -2.3174 Soluble
165 K B -2.3973 Soluble
166 V B -1.2498 Soluble
167 Q B -0.8275 Soluble
168 W B 0.0000 Buried
169 K B -0.4810 Soluble
170 V B 0.0000 Buried
171 D B -1.5242 Soluble
172 N B -1.3575 Soluble
173 A B -0.1055 Soluble
174 L B 0.8046 Aggregation-prone
175 Q B -0.1154 Soluble
176 S B -0.4266 Soluble
177 G B -0.8324 Soluble
178 N B -0.7162 Soluble
179 S B -1.0225 Soluble
180 Q B -1.1309 Soluble
181 E B -2.0083 Soluble
182 S B -0.9465 Soluble
183 V B -0.7748 Soluble
184 T B -1.1221 Soluble
185 E B -2.2478 Soluble
186 Q B 0.0000 Buried
187 D B -2.0202 Soluble
188 S B -2.1412 Soluble
189 K B -2.5693 Soluble
190 D B -1.9812 Soluble
191 S B 0.0000 Buried
192 T B 0.0000 Buried
193 Y B 0.0000 Buried
194 S B 0.0000 Buried
195 L B 0.0000 Buried
196 S B 0.0000 Buried
197 S B 0.0000 Buried
198 T B 0.0000 Buried
199 L B 0.0000 Buried
200 T B -0.3548 Soluble
201 L B -0.6077 Soluble
202 S B -0.9700 Soluble
203 K B -1.9404 Soluble
204 A B -1.7837 Soluble
205 D B -2.3878 Soluble
206 Y B 0.0000 Buried
207 E B -3.3065 Soluble
208 K B -3.4415 Soluble
209 H B -2.9353 Soluble
210 K B -3.2406 Soluble
211 V B -1.3984 Soluble
212 Y B 0.0000 Buried
213 A B 0.0000 Buried
214 C B 0.0000 Buried
215 E B -0.9531 Soluble
216 V B 0.0000 Buried
217 T B -1.2329 Soluble
218 H B 0.0000 Buried
219 Q B -1.5483 Soluble
220 G B -0.3651 Soluble
221 L B -0.2201 Soluble
222 S B -0.4711 Soluble
223 S B -0.4314 Soluble
224 P B -0.5475 Soluble
225 V B -0.0018 Soluble
226 T B -0.5088 Soluble
227 K B -0.9106 Soluble
228 S B -0.8412 Soluble
229 F B 0.0000 Buried
230 N B -2.1701 Soluble
231 R B -2.6784 Soluble
232 G B -2.2159 Soluble
233 E B -2.4583 Soluble

3D Structure — colored by A4D score

Sequence - click residue to focus in viewer  |  colored by A4D score
Load structure to view sequence…
Color Legend (B-factor = A4D Score)
Score > 1.5 — highly aggregation-prone
Score 0.5–1.5 — aggregation-prone
Score ≈ 0 — buried
Score −1 to −0.5 — soluble
Score < −2.5 — highly soluble
pH Structure
Load structure at specific pH condition
A4D Score Threshold
Highlight residues > threshold in the sequence panel
CDR Regions
HCDR1
HCDR2
HCDR3
LCDR1
LCDR2
LCDR3
Display Options

pH-Dependent Aggregation Profiles

A4D scores calculated across 11 pH conditions (4.0–9.0, step 0.5). Click a row to view the structure at that pH. The input structure is globular — max score is recommended for pH analysis.

pH Avg A4D Score Max A4D Score Downloads
4.0 -0.668 2.6476 CSV PDB
4.5 -0.7059 2.6476 CSV PDB
5.0 -0.7512 2.6476 CSV PDB
5.5 -0.794 2.6476 CSV PDB
6.0 -0.8237 2.6476 CSV PDB
6.5 -0.8327 2.6475 CSV PDB
7.0 -0.8213 2.6475 CSV PDB
7.5 -0.7963 2.6475 CSV PDB
8.0 -0.764 2.6475 CSV PDB
8.5 -0.7264 2.6472 CSV PDB
9.0 -0.6831 2.6466 CSV PDB
Average A4D Score vs pH
Max A4D Score vs pH