Tomuzotuximab / 5iv2

A4DAB272_5iv2_B_A | Source PDB: 5iv2 | Chains: B, A | Done
99.56
Yes
10 Å
Yes
Avg A4D Score
-0.6822
Max Score
1.9719
Min Score
-3.7205
Total Score
-291.99
Score CDR
-0.2951
Score non-CDR
-0.7288

Calculation Parameters

Chain Sequence(s) QVQLKQSGPGLVQPSQSLSITCTVSGFSLTNYGVHWVRQSPGKGLEWLGVIWSGGNTDYNTPFTSRLSINKDNSKSQVFFKMNSLQSNDTAIYYCARALTYYDYEFAYWGQGTLVTVSAASTKGPSVFPLAPSSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKDILLTQSPVILSVSPGERVSFSCRASQSIGTNIHWYQQRTNGSPRLLIKYASESISGIPSRFSGSGSGTDFTLSINSVESEDIADYYCQQNNNWPTTFGAGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGA input.pdb
Selected Chain(s) B (Heavy), A (Light)
Distance of Aggregation 10 Å
FoldX Energy Minimization Yes
pH Calculations Yes
Downloads Download all data (.tar.gz)

Aggrescan4D Profile

Aggregation-prone (score > 0)
Soluble (score < 0)
Buried (score = 0)

Per-Residue A4D Scores

Download CSV
Minimum Score -3.7205
Maximum Score 1.9719
Average Score -0.6822
Total Score -291.9884

Residues with A4D score > 0.0 are highlighted as aggregation-prone.

Index Residue Chain A4D Score Classification
1 Q B -1.5346 Soluble
2 V B -0.9824 Soluble
3 Q B -1.9418 Soluble
4 L B 0.0000 Buried
5 K B -2.4220 Soluble
6 Q B 0.0000 Buried
7 S B -0.8691 Soluble
8 G B -1.1758 Soluble
9 P B -0.4515 Soluble
11 G B -0.3885 Soluble
12 L B 0.1006 Aggregation-prone
13 V B -0.5730 Soluble
14 Q B -1.1415 Soluble
15 P B -1.3225 Soluble
16 S B -1.5124 Soluble
17 Q B -1.9016 Soluble
18 S B -1.5998 Soluble
19 L B 0.0000 Buried
20 S B -0.6361 Soluble
21 I B 0.0000 Buried
22 T B -0.5193 Soluble
23 C B 0.0000 Buried
24 T B -1.2283 Soluble
25 V B 0.0000 Buried
26 S B -1.3813 Soluble
27 G B -1.0807 Soluble
28 F B -0.5826 Soluble
29 S B -0.8749 Soluble
30 L B 0.0000 Buried
35 T B -0.8970 Soluble
36 N B -0.8481 Soluble
37 Y B 0.4211 Aggregation-prone
38 G B 0.0000 Buried
39 V B 0.0000 Buried
40 H B 0.0000 Buried
41 W B 0.0000 Buried
42 V B 0.0000 Buried
43 R B 0.0000 Buried
44 Q B -0.4396 Soluble
45 S B -0.9939 Soluble
46 P B -1.1923 Soluble
47 G B -1.7807 Soluble
48 K B -2.2613 Soluble
49 G B -1.1599 Soluble
50 L B 0.0000 Buried
51 E B 0.0000 Buried
52 W B 0.0000 Buried
53 L B 0.0000 Buried
54 G B 0.0000 Buried
55 V B 0.0000 Buried
56 I B 0.0000 Buried
57 W B -0.5011 Soluble
58 S B -0.6409 Soluble
59 G B -1.2245 Soluble
63 G B -1.5442 Soluble
64 N B -1.8586 Soluble
65 T B -1.3019 Soluble
66 D B -1.0307 Soluble
67 Y B -0.4200 Soluble
68 N B -0.2024 Soluble
69 T B -0.2417 Soluble
70 P B -0.3990 Soluble
71 F B 0.0000 Buried
72 T B -0.4894 Soluble
74 S B -0.6017 Soluble
75 R B -1.0625 Soluble
76 L B 0.0000 Buried
77 S B -1.0478 Soluble
78 I B 0.0000 Buried
79 N B -1.7127 Soluble
80 K B -1.4282 Soluble
81 D B -1.7974 Soluble
82 N B -2.1850 Soluble
83 S B -1.6750 Soluble
84 K B -2.3716 Soluble
85 S B -1.6121 Soluble
86 Q B -1.5218 Soluble
87 V B 0.0000 Buried
88 F B -0.2253 Soluble
89 F B 0.0000 Buried
90 K B -1.5315 Soluble
92 N B -1.7915 Soluble
93 S B -1.5041 Soluble
94 L B 0.0000 Buried
95 Q B -2.0504 Soluble
96 S B -1.4643 Soluble
97 N B -2.0739 Soluble
98 D B 0.0000 Buried
99 T B -0.5901 Soluble
100 A B 0.0000 Buried
101 I B 0.6012 Aggregation-prone
102 Y B 0.0000 Buried
103 Y B 0.0000 Buried
104 C B 0.0000 Buried
105 A B 0.0000 Buried
106 R B 0.0000 Buried
107 A B 0.0000 Buried
108 L B 1.0311 Aggregation-prone
109 T B 1.1495 Aggregation-prone
110 Y B 1.8671 Aggregation-prone
111 Y B 1.9719 Aggregation-prone
112 D B 0.0000 Buried
113 Y B 0.6132 Aggregation-prone
114 E B 0.0000 Buried
115 F B 0.0000 Buried
116 A B 0.2657 Aggregation-prone
117 Y B 0.1359 Aggregation-prone
118 W B -0.5395 Soluble
119 G B 0.0000 Buried
120 Q B -1.8573 Soluble
121 G B -0.8853 Soluble
122 T B 0.0000 Buried
123 L B 0.2849 Aggregation-prone
124 V B 0.0000 Buried
125 T B -0.2123 Soluble
126 V B 0.0000 Buried
127 S B -0.3940 Soluble
128 A B -0.2011 Soluble
129 A B -0.2441 Soluble
130 S B -0.4988 Soluble
131 T B -0.8427 Soluble
132 K B -1.4761 Soluble
133 G B -1.4456 Soluble
134 P B 0.0000 Buried
135 S B -0.4255 Soluble
136 V B 0.0000 Buried
137 F B 0.0000 Buried
138 P B 0.0000 Buried
139 L B 0.0000 Buried
140 A B -1.2338 Soluble
141 P B 0.0000 Buried
142 S B -0.8798 Soluble
143 S B -0.5360 Soluble
144 G B -0.7642 Soluble
145 G B -0.8834 Soluble
146 T B -0.6125 Soluble
147 A B -0.3493 Soluble
148 A B 0.0000 Buried
149 L B 0.0000 Buried
150 G B 0.0000 Buried
151 C B 0.0000 Buried
152 L B 0.0000 Buried
153 V B 0.0000 Buried
154 K B 0.0000 Buried
155 D B -0.6371 Soluble
156 Y B 0.0000 Buried
157 F B 0.0000 Buried
158 P B 0.0000 Buried
159 E B -0.2588 Soluble
160 P B -0.4347 Soluble
161 V B -0.5004 Soluble
162 T B -0.4790 Soluble
163 V B -0.2784 Soluble
164 S B -0.3855 Soluble
165 W B 0.0000 Buried
166 N B -0.9949 Soluble
167 S B -0.7276 Soluble
168 G B -0.6322 Soluble
169 A B -0.2993 Soluble
170 L B -0.0812 Soluble
171 T B -0.2090 Soluble
172 S B -0.2044 Soluble
173 G B -0.2528 Soluble
174 V B 0.1520 Aggregation-prone
175 H B -0.3038 Soluble
176 T B 0.0613 Aggregation-prone
177 F B 0.0000 Buried
178 P B -0.2268 Soluble
179 A B 0.2976 Aggregation-prone
180 V B 0.5419 Aggregation-prone
181 L B 1.0684 Aggregation-prone
182 Q B 0.2121 Aggregation-prone
183 S B -0.0937 Soluble
184 S B -0.2667 Soluble
185 G B -0.0183 Soluble
186 L B 0.0158 Aggregation-prone
187 Y B 0.3682 Aggregation-prone
188 S B 0.0000 Buried
189 L B 0.0000 Buried
190 S B 0.0000 Buried
191 S B 0.0000 Buried
192 V B 0.0000 Buried
193 V B 0.0000 Buried
194 T B -0.1389 Soluble
195 V B 0.0000 Buried
196 P B -0.5305 Soluble
197 S B -0.6436 Soluble
198 S B -0.6315 Soluble
199 S B 0.0000 Buried
200 L B -0.8144 Soluble
201 G B -0.9923 Soluble
202 T B -0.8117 Soluble
203 Q B -1.4299 Soluble
204 T B -1.2568 Soluble
205 Y B 0.0000 Buried
206 I B -1.3093 Soluble
207 C B 0.0000 Buried
208 N B -1.4177 Soluble
209 V B 0.0000 Buried
210 N B -1.6921 Soluble
211 H B 0.0000 Buried
212 K B -2.5011 Soluble
213 P B -1.4849 Soluble
214 S B -1.7644 Soluble
215 N B -2.4428 Soluble
216 T B -1.9565 Soluble
217 K B -2.4862 Soluble
218 V B -1.4815 Soluble
219 D B -2.2471 Soluble
220 K B -2.0269 Soluble
221 R B -2.5962 Soluble
222 V B 0.0000 Buried
223 E B -2.9020 Soluble
224 P B -1.9239 Soluble
225 K B -2.3087 Soluble
1 D A -1.3840 Soluble
2 I A 0.0000 Buried
3 L A 0.6497 Aggregation-prone
4 L A 0.0000 Buried
5 T A -0.3218 Soluble
6 Q A 0.0227 Aggregation-prone
7 S A 0.1508 Aggregation-prone
8 P A 0.8064 Aggregation-prone
9 V A 1.7847 Aggregation-prone
10 I A 1.1756 Aggregation-prone
11 L A 0.5169 Aggregation-prone
12 S A -0.3081 Soluble
13 V A -1.1096 Soluble
14 S A -1.7523 Soluble
15 P A -1.9275 Soluble
16 G A -2.1984 Soluble
17 E A -2.9899 Soluble
18 R A -3.4118 Soluble
19 V A 0.0000 Buried
20 S A -0.8045 Soluble
21 F A 0.0000 Buried
22 S A -0.9466 Soluble
23 C A 0.0000 Buried
24 R A -2.2916 Soluble
25 A A -1.1717 Soluble
26 S A -0.9283 Soluble
27 Q A -1.4879 Soluble
28 S A -1.4574 Soluble
29 I A 0.0000 Buried
36 G A -1.0038 Soluble
37 T A -0.7909 Soluble
38 N A -0.7554 Soluble
39 I A 0.0000 Buried
40 H A 0.0000 Buried
41 W A 0.0000 Buried
42 Y A 0.0000 Buried
43 Q A 0.0000 Buried
44 Q A -1.3095 Soluble
45 R A -1.9165 Soluble
46 T A -1.7256 Soluble
47 N A -1.9876 Soluble
48 G A -1.5123 Soluble
49 S A -0.9605 Soluble
50 P A 0.0000 Buried
51 R A -0.6922 Soluble
52 L A 0.0000 Buried
53 L A 0.0000 Buried
54 I A 0.0000 Buried
55 K A -0.6767 Soluble
56 Y A -0.6367 Soluble
57 A A 0.0000 Buried
65 S A -1.2714 Soluble
66 E A -1.9602 Soluble
67 S A -1.1709 Soluble
68 I A -0.5283 Soluble
69 S A -0.3450 Soluble
70 G A -0.4718 Soluble
71 I A -0.2480 Soluble
72 P A -0.3166 Soluble
74 S A -0.6169 Soluble
75 R A -1.2093 Soluble
76 F A 0.0000 Buried
77 S A -0.9830 Soluble
78 G A -0.7491 Soluble
79 S A -0.9277 Soluble
80 G A -1.1664 Soluble
83 S A -1.1871 Soluble
84 G A -1.3579 Soluble
85 T A -1.9450 Soluble
86 D A -2.7381 Soluble
87 F A 0.0000 Buried
88 T A -0.9130 Soluble
89 L A 0.0000 Buried
90 S A -1.0199 Soluble
91 I A 0.0000 Buried
92 N A -2.8383 Soluble
93 S A -2.4917 Soluble
94 V A 0.0000 Buried
95 E A -2.5070 Soluble
96 S A -2.2358 Soluble
97 E A -2.1259 Soluble
98 D A 0.0000 Buried
99 I A -1.4500 Soluble
100 A A 0.0000 Buried
101 D A -0.9776 Soluble
102 Y A 0.0000 Buried
103 Y A 0.0000 Buried
104 C A 0.0000 Buried
105 Q A 0.0000 Buried
106 Q A 0.0000 Buried
107 N A -0.5488 Soluble
108 N A -1.0534 Soluble
109 N A -0.8929 Soluble
114 W A 0.2111 Aggregation-prone
115 P A 0.0000 Buried
116 T A 0.0000 Buried
117 T A 0.0111 Aggregation-prone
118 F A 0.1970 Aggregation-prone
119 G A 0.0000 Buried
120 A A -0.0306 Soluble
121 G A -0.0315 Soluble
122 T A 0.0000 Buried
123 K A -0.5140 Soluble
124 L A 0.0000 Buried
125 E A -0.8844 Soluble
126 L A 0.0000 Buried
127 K A -1.6258 Soluble
128 R A -1.2674 Soluble
129 T A -0.1069 Soluble
130 V A 0.5284 Aggregation-prone
131 A A 0.2157 Aggregation-prone
132 A A -0.0562 Soluble
133 P A 0.0000 Buried
134 S A -0.1658 Soluble
135 V A 0.0000 Buried
136 F A 0.1994 Aggregation-prone
137 I A 0.1691 Aggregation-prone
138 F A 0.0000 Buried
139 P A -0.4925 Soluble
140 P A -0.7487 Soluble
141 S A -1.7170 Soluble
142 D A -2.7524 Soluble
143 E A -2.5952 Soluble
144 Q A 0.0000 Buried
145 L A -2.1634 Soluble
146 K A -2.6836 Soluble
147 S A -1.6575 Soluble
148 G A -1.1865 Soluble
149 T A -0.9725 Soluble
150 A A 0.0000 Buried
151 S A 0.0000 Buried
152 V A 0.0000 Buried
153 V A 0.0000 Buried
154 C A 0.0000 Buried
155 L A 0.0000 Buried
156 L A 0.0000 Buried
157 N A 0.0000 Buried
158 N A -0.9172 Soluble
159 F A 0.0000 Buried
160 Y A -0.8975 Soluble
161 P A -1.3811 Soluble
162 R A -2.3870 Soluble
163 E A -2.9184 Soluble
164 A A -2.1773 Soluble
165 K A -2.2859 Soluble
166 V A -1.2073 Soluble
167 Q A -0.8172 Soluble
168 W A 0.0000 Buried
169 K A -0.7460 Soluble
170 V A 0.0000 Buried
171 D A -1.8992 Soluble
172 N A -1.3871 Soluble
173 A A -0.3359 Soluble
174 L A 0.5803 Aggregation-prone
175 Q A -0.5486 Soluble
176 S A -0.7192 Soluble
177 G A -1.3557 Soluble
178 N A -1.7742 Soluble
179 S A -1.5434 Soluble
180 Q A -1.5154 Soluble
181 E A -1.6949 Soluble
182 S A -0.8324 Soluble
183 V A -0.5592 Soluble
184 T A -1.0150 Soluble
185 E A -2.2585 Soluble
186 Q A 0.0000 Buried
187 D A -2.0602 Soluble
188 S A -2.3079 Soluble
189 K A -2.7282 Soluble
190 D A -2.1381 Soluble
191 S A 0.0000 Buried
192 T A 0.0000 Buried
193 Y A 0.0000 Buried
194 S A 0.0000 Buried
195 L A 0.0000 Buried
196 S A 0.0000 Buried
197 S A 0.0000 Buried
198 T A -0.7435 Soluble
199 L A 0.0000 Buried
200 T A -0.7402 Soluble
201 L A 0.0000 Buried
202 S A -1.1132 Soluble
203 K A -1.9867 Soluble
204 A A -1.9412 Soluble
205 D A -2.6814 Soluble
206 Y A 0.0000 Buried
207 E A -3.6634 Soluble
208 K A -3.7205 Soluble
209 H A -3.0427 Soluble
210 K A -2.8587 Soluble
211 V A -1.2795 Soluble
212 Y A 0.0000 Buried
213 A A 0.0000 Buried
214 C A 0.0000 Buried
215 E A -0.9795 Soluble
216 V A 0.0000 Buried
217 T A -1.2493 Soluble
218 H A 0.0000 Buried
219 Q A -1.4477 Soluble
220 G A -0.3315 Soluble
221 L A -0.1556 Soluble
222 S A -0.4239 Soluble
223 S A -0.3985 Soluble
224 P A -0.5856 Soluble
225 V A -0.0589 Soluble
226 T A -0.4492 Soluble
227 K A -0.6252 Soluble
228 S A -0.5032 Soluble
229 F A -0.5285 Soluble
230 N A -1.3124 Soluble
231 R A -1.9820 Soluble
232 G A -1.0290 Soluble
233 A A -0.6192 Soluble

3D Structure — colored by A4D score

Sequence - click residue to focus in viewer  |  colored by A4D score
Load structure to view sequence…
Color Legend (B-factor = A4D Score)
Score > 1.5 — highly aggregation-prone
Score 0.5–1.5 — aggregation-prone
Score ≈ 0 — buried
Score −1 to −0.5 — soluble
Score < −2.5 — highly soluble
pH Structure
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A4D Score Threshold
Highlight residues > threshold in the sequence panel
CDR Regions
HCDR1
HCDR2
HCDR3
LCDR1
LCDR2
LCDR3
Display Options

pH-Dependent Aggregation Profiles

A4D scores calculated across 11 pH conditions (4.0–9.0, step 0.5). Click a row to view the structure at that pH. The input structure is globular — max score is recommended for pH analysis.

pH Avg A4D Score Max A4D Score Downloads
4.0 -0.6934 2.7545 CSV PDB
4.5 -0.7306 2.6909 CSV PDB
5.0 -0.7746 2.6137 CSV PDB
5.5 -0.8165 2.5309 CSV PDB
6.0 -0.8464 2.4461 CSV PDB
6.5 -0.8563 2.3607 CSV PDB
7.0 -0.8457 2.2753 CSV PDB
7.5 -0.8212 2.1938 CSV PDB
8.0 -0.7893 2.1932 CSV PDB
8.5 -0.7522 2.1914 CSV PDB
9.0 -0.71 2.1857 CSV PDB
Average A4D Score vs pH
Max A4D Score vs pH