Zemocimig / 8gv0

A4DAB305_8gv0_C_D | Source PDB: 8gv0 | Chains: C, D | Done
100
Yes
10 Å
Yes
Avg A4D Score
-0.8179
Max Score
1.2261
Min Score
-3.6529
Total Score
-357.44
Score CDR
-0.9602
Score non-CDR
-0.8

Calculation Parameters

Chain Sequence(s) QVQLVESGGGLVQPGGSLRLSCAASGFTFSYYDIQWVRQAPGKGLEWVSSISPSGQSTYYRREVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARRTGREEGGWIFDYWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYTCNVDHKPSNTKVDKRVESKEIVLTQSPATLSVSPGERATLSCRASRSVRRELAWYQQKPGQAPELLIYGASTRETGIPARFSGSGSGTDFTLTINSLEAEDAATYYCQQYRDPPGTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC input.pdb
Selected Chain(s) C (Heavy), D (Light)
Distance of Aggregation 10 Å
FoldX Energy Minimization Yes
pH Calculations Yes
Downloads Download all data (.tar.gz)

Aggrescan4D Profile

Aggregation-prone (score > 0)
Soluble (score < 0)
Buried (score = 0)

Per-Residue A4D Scores

Download CSV
Minimum Score -3.6529
Maximum Score 1.2261
Average Score -0.8179
Total Score -357.4375

Residues with A4D score > 0.0 are highlighted as aggregation-prone.

Index Residue Chain A4D Score Classification
1 Q C -1.4627 Soluble
2 V C -1.1023 Soluble
3 Q C -1.3484 Soluble
4 L C 0.0000 Buried
5 V C 0.1141 Aggregation-prone
6 E C 0.0000 Buried
7 S C -0.5015 Soluble
8 G C -0.8703 Soluble
9 G C -0.5775 Soluble
11 G C -0.4449 Soluble
12 L C -0.1080 Soluble
13 V C 0.0000 Buried
14 Q C -1.7532 Soluble
15 P C -1.5432 Soluble
16 G C -1.4989 Soluble
17 G C -1.1572 Soluble
18 S C -1.1865 Soluble
19 L C 0.0000 Buried
20 R C -1.7460 Soluble
21 L C 0.0000 Buried
22 S C -0.1081 Soluble
23 C C 0.0000 Buried
24 A C -0.2671 Soluble
25 A C 0.0000 Buried
26 S C -1.0296 Soluble
27 G C -1.0482 Soluble
28 F C -0.3347 Soluble
29 T C -0.0795 Soluble
30 F C 0.0000 Buried
35 S C 0.1019 Aggregation-prone
36 Y C 1.2261 Aggregation-prone
37 Y C 0.6770 Aggregation-prone
38 D C 0.0000 Buried
39 I C 0.0000 Buried
40 Q C 0.0000 Buried
41 W C 0.0000 Buried
42 V C 0.0000 Buried
43 R C 0.0000 Buried
44 Q C -0.6833 Soluble
45 A C -1.1051 Soluble
46 P C -0.9021 Soluble
47 G C -1.4514 Soluble
48 K C -2.2296 Soluble
49 G C -1.3946 Soluble
50 L C 0.0000 Buried
51 E C -0.7858 Soluble
52 W C 0.0000 Buried
53 V C 0.0000 Buried
54 S C 0.0000 Buried
55 S C 0.0000 Buried
56 I C 0.0000 Buried
57 S C -0.4275 Soluble
58 P C -0.9363 Soluble
59 S C -0.6019 Soluble
62 G C -1.0313 Soluble
63 Q C -1.5239 Soluble
64 S C -0.6274 Soluble
65 T C 0.1209 Aggregation-prone
66 Y C 0.3969 Aggregation-prone
67 Y C -0.8714 Soluble
68 R C -2.0594 Soluble
69 R C -3.1991 Soluble
70 E C -3.1591 Soluble
71 V C 0.0000 Buried
72 K C -2.9117 Soluble
74 G C -1.9485 Soluble
75 R C -1.6537 Soluble
76 F C 0.0000 Buried
77 T C -0.5204 Soluble
78 I C 0.1744 Aggregation-prone
79 S C -0.3484 Soluble
80 R C -1.5980 Soluble
81 D C -2.6094 Soluble
82 N C -2.8132 Soluble
83 S C -2.2044 Soluble
84 K C -2.8703 Soluble
85 N C -2.3827 Soluble
86 T C 0.0000 Buried
87 L C 0.0000 Buried
88 Y C -0.0022 Soluble
89 L C 0.0000 Buried
90 Q C -1.0788 Soluble
91 M C 0.0000 Buried
92 N C -1.4389 Soluble
93 S C -1.2231 Soluble
94 L C 0.0000 Buried
95 R C -2.3447 Soluble
96 A C -1.7908 Soluble
97 E C -2.2143 Soluble
98 D C 0.0000 Buried
99 T C -0.7043 Soluble
100 A C 0.0000 Buried
101 V C 0.2091 Aggregation-prone
102 Y C 0.0000 Buried
103 Y C 0.0000 Buried
104 C C 0.0000 Buried
105 A C 0.0000 Buried
106 R C -0.0599 Soluble
107 R C -0.2447 Soluble
108 T C -0.9118 Soluble
109 G C -2.1304 Soluble
110 R C -3.3319 Soluble
111 E C -3.6529 Soluble
111A E C -3.2872 Soluble
112A G C -2.2110 Soluble
112 G C -1.5886 Soluble
113 W C -0.5353 Soluble
114 I C 0.0000 Buried
115 F C 0.0000 Buried
116 D C -0.7465 Soluble
117 Y C -0.4996 Soluble
118 W C 0.0000 Buried
119 G C 0.0000 Buried
120 Q C -1.4151 Soluble
121 G C 0.0000 Buried
122 T C -0.0363 Soluble
123 L C 0.4112 Aggregation-prone
124 V C 0.0000 Buried
125 T C 0.0000 Buried
126 V C 0.0000 Buried
127 S C -0.7206 Soluble
128 S C -0.6486 Soluble
129 A C -0.4924 Soluble
130 S C -0.6966 Soluble
131 T C -0.7260 Soluble
132 K C -1.5216 Soluble
133 G C -1.5736 Soluble
134 P C -0.6649 Soluble
135 S C -0.5956 Soluble
136 V C 0.0000 Buried
137 F C -0.5680 Soluble
138 P C -0.8983 Soluble
139 L C 0.0000 Buried
140 A C -0.4918 Soluble
141 P C -0.4209 Soluble
142 C C -0.3504 Soluble
143 S C -1.1176 Soluble
144 R C -2.0003 Soluble
145 S C -1.5425 Soluble
146 T C -1.3889 Soluble
147 S C -1.2261 Soluble
148 E C -2.1569 Soluble
149 S C -1.2780 Soluble
150 T C -0.8265 Soluble
151 A C 0.0000 Buried
152 A C 0.0000 Buried
153 L C 0.0000 Buried
154 G C 0.0000 Buried
155 C C 0.0000 Buried
156 L C 0.0000 Buried
157 V C 0.0000 Buried
158 K C 0.0000 Buried
159 D C -0.5723 Soluble
160 Y C 0.0000 Buried
161 F C -0.4325 Soluble
162 P C 0.0000 Buried
163 E C -0.0919 Soluble
164 P C -0.3048 Soluble
165 V C -0.2321 Soluble
166 T C -0.4197 Soluble
167 V C -0.3580 Soluble
168 S C -0.4836 Soluble
169 W C 0.0000 Buried
170 N C -0.9710 Soluble
171 S C -0.7914 Soluble
172 G C -0.5849 Soluble
173 A C -0.2545 Soluble
174 L C -0.0734 Soluble
175 T C -0.1511 Soluble
176 S C -0.1539 Soluble
177 G C -0.1564 Soluble
178 V C 0.2118 Aggregation-prone
179 H C -0.0966 Soluble
180 T C -0.0147 Soluble
181 F C 0.0000 Buried
182 P C -0.3183 Soluble
183 A C 0.1347 Aggregation-prone
184 V C 0.4439 Aggregation-prone
185 L C 1.2208 Aggregation-prone
186 Q C 0.0000 Buried
187 S C -0.1071 Soluble
188 S C -0.1786 Soluble
189 G C 0.1662 Aggregation-prone
190 L C -0.0194 Soluble
191 Y C 0.3287 Aggregation-prone
192 S C 0.0000 Buried
193 L C 0.0000 Buried
194 S C 0.0000 Buried
195 S C 0.0000 Buried
196 V C 0.0000 Buried
197 V C 0.0000 Buried
198 T C -0.1425 Soluble
199 V C 0.0000 Buried
200 P C -0.4602 Soluble
201 S C -0.9790 Soluble
202 S C -0.5076 Soluble
203 S C -0.4408 Soluble
204 L C -0.6808 Soluble
205 G C -1.2742 Soluble
206 T C -0.7857 Soluble
207 Q C -1.2721 Soluble
208 T C -1.4403 Soluble
209 Y C 0.0000 Buried
210 T C -1.4931 Soluble
211 C C 0.0000 Buried
212 N C -1.5717 Soluble
213 V C 0.0000 Buried
214 D C -2.1006 Soluble
215 H C 0.0000 Buried
216 K C -2.7685 Soluble
217 P C -1.6281 Soluble
218 S C -1.9129 Soluble
219 N C -2.5427 Soluble
220 T C -2.0650 Soluble
221 K C -2.7083 Soluble
222 V C -1.5231 Soluble
223 D C -2.4758 Soluble
224 K C -1.9403 Soluble
225 R C -2.2272 Soluble
226 V C 0.0000 Buried
227 E C -2.6137 Soluble
228 S C -2.0449 Soluble
229 K C -2.3568 Soluble
1 E D -1.7363 Soluble
2 I D 0.0000 Buried
3 V D 0.8558 Aggregation-prone
4 L D -0.0466 Soluble
5 T D -0.4104 Soluble
6 Q D -0.7068 Soluble
7 S D -0.7108 Soluble
8 P D -0.4551 Soluble
9 A D -0.4755 Soluble
10 T D -0.4314 Soluble
11 L D -0.3185 Soluble
12 S D -0.5139 Soluble
13 V D -1.2478 Soluble
14 S D -1.8482 Soluble
15 P D -2.0684 Soluble
16 G D -2.2648 Soluble
17 E D -3.4108 Soluble
18 R D -3.2544 Soluble
19 A D 0.0000 Buried
20 T D -0.9067 Soluble
21 L D 0.0000 Buried
22 S D -1.0203 Soluble
23 C D 0.0000 Buried
24 R D -2.5005 Soluble
25 A D -1.1559 Soluble
26 S D -0.7469 Soluble
27 R D -1.9621 Soluble
28 S D -2.3871 Soluble
29 V D 0.0000 Buried
36 R D -3.5939 Soluble
37 R D -3.2620 Soluble
38 E D -2.5152 Soluble
39 L D 0.0000 Buried
40 A D 0.0000 Buried
41 W D 0.0000 Buried
42 Y D 0.0000 Buried
43 Q D -1.1556 Soluble
44 Q D -1.4026 Soluble
45 K D -2.0248 Soluble
46 P D -1.5372 Soluble
47 G D -1.6000 Soluble
48 Q D -2.1676 Soluble
49 A D -1.5492 Soluble
50 P D 0.0000 Buried
51 E D -2.1334 Soluble
52 L D 0.0000 Buried
53 L D 0.0000 Buried
54 I D 0.0000 Buried
55 Y D -0.7691 Soluble
56 G D -1.4714 Soluble
57 A D 0.0000 Buried
65 S D -1.0113 Soluble
66 T D -0.9734 Soluble
67 R D -2.0531 Soluble
68 E D -1.5283 Soluble
69 T D -0.8627 Soluble
70 G D -0.8395 Soluble
71 I D -0.8098 Soluble
72 P D -0.6282 Soluble
74 A D -0.6424 Soluble
75 R D -1.1351 Soluble
76 F D 0.0000 Buried
77 S D -0.7730 Soluble
78 G D 0.0000 Buried
79 S D -0.8076 Soluble
80 G D -1.7795 Soluble
83 S D -2.3648 Soluble
84 G D -2.5174 Soluble
85 T D -2.5675 Soluble
86 D D -2.9621 Soluble
87 F D 0.0000 Buried
88 T D -0.8628 Soluble
89 L D 0.0000 Buried
90 T D -0.8198 Soluble
91 I D 0.0000 Buried
92 N D -2.2875 Soluble
93 S D -2.2275 Soluble
94 L D 0.0000 Buried
95 E D -2.3781 Soluble
96 A D -2.5187 Soluble
97 E D -2.7659 Soluble
98 D D 0.0000 Buried
99 A D 0.0000 Buried
100 A D 0.0000 Buried
101 T D -0.7604 Soluble
102 Y D 0.0000 Buried
103 Y D 0.0000 Buried
104 C D 0.0000 Buried
105 Q D 0.0000 Buried
106 Q D 0.0000 Buried
107 Y D 0.0000 Buried
108 R D -2.9977 Soluble
109 D D -1.9629 Soluble
114 P D -1.2548 Soluble
115 P D -0.7277 Soluble
116 G D 0.0000 Buried
117 T D -0.2196 Soluble
118 F D 0.0000 Buried
119 G D 0.0000 Buried
120 G D -1.0192 Soluble
121 G D 0.0000 Buried
122 T D 0.0000 Buried
123 K D -1.1462 Soluble
124 V D 0.0000 Buried
125 E D -1.2249 Soluble
126 I D 0.0000 Buried
127 K D -1.2074 Soluble
128 R D -0.7514 Soluble
129 T D 0.2123 Aggregation-prone
130 V D 1.2167 Aggregation-prone
131 A D 0.0000 Buried
132 A D 0.0611 Aggregation-prone
133 P D -0.0270 Soluble
134 S D 0.0257 Aggregation-prone
135 V D 0.0081 Aggregation-prone
136 F D 0.0889 Aggregation-prone
137 I D 0.1210 Aggregation-prone
138 F D 0.0000 Buried
139 P D -0.1424 Soluble
140 P D 0.0000 Buried
141 S D -1.6513 Soluble
142 D D -3.0428 Soluble
143 E D -3.0813 Soluble
144 Q D 0.0000 Buried
145 L D 0.0000 Buried
146 K D -3.0746 Soluble
147 S D -1.9340 Soluble
148 G D -1.4457 Soluble
149 T D -1.0411 Soluble
150 A D 0.0000 Buried
151 S D 0.0000 Buried
152 V D 0.0000 Buried
153 V D 0.0000 Buried
154 C D 0.0000 Buried
155 L D 0.0000 Buried
156 L D 0.0000 Buried
157 N D -0.2214 Soluble
158 N D -0.6567 Soluble
159 F D 0.0000 Buried
160 Y D 0.0000 Buried
161 P D -1.4116 Soluble
162 R D -2.3882 Soluble
163 E D -2.9533 Soluble
164 A D -2.2054 Soluble
165 K D -2.4143 Soluble
166 V D -0.9498 Soluble
167 Q D -0.4131 Soluble
168 W D 0.0000 Buried
169 K D -0.6037 Soluble
170 V D 0.0000 Buried
171 D D -1.8532 Soluble
172 N D -1.5116 Soluble
173 A D -0.5182 Soluble
174 L D 0.2755 Aggregation-prone
175 Q D -0.4442 Soluble
176 S D -0.4551 Soluble
177 G D -0.7850 Soluble
178 N D -0.8605 Soluble
179 S D -1.0678 Soluble
180 Q D -1.2122 Soluble
181 E D -1.9229 Soluble
182 S D 0.0000 Buried
183 V D -0.6929 Soluble
184 T D -1.0012 Soluble
185 E D -2.0176 Soluble
186 Q D -2.1762 Soluble
187 D D -2.6734 Soluble
188 S D -2.6400 Soluble
189 K D -3.0205 Soluble
190 D D -2.5221 Soluble
191 S D 0.0000 Buried
192 T D 0.0000 Buried
193 Y D 0.0000 Buried
194 S D 0.0000 Buried
195 L D 0.0000 Buried
196 S D 0.0000 Buried
197 S D 0.0000 Buried
198 T D 0.0000 Buried
199 L D 0.0000 Buried
200 T D -0.3103 Soluble
201 L D -0.5544 Soluble
202 S D -1.0604 Soluble
203 K D -2.0090 Soluble
204 A D -1.6523 Soluble
205 D D -2.3900 Soluble
206 Y D 0.0000 Buried
207 E D -2.6443 Soluble
208 K D -3.0835 Soluble
209 H D -2.4722 Soluble
210 K D -2.5495 Soluble
211 V D -1.5126 Soluble
212 Y D 0.0000 Buried
213 A D 0.0000 Buried
214 C D 0.0000 Buried
215 E D -0.8158 Soluble
216 V D 0.0000 Buried
217 T D -1.1752 Soluble
218 H D 0.0000 Buried
219 Q D -1.2721 Soluble
220 G D -0.2500 Soluble
221 L D -0.2478 Soluble
222 S D -0.4989 Soluble
223 S D -0.4498 Soluble
224 P D -0.6291 Soluble
225 V D -0.1678 Soluble
226 T D -0.6993 Soluble
227 K D -1.2789 Soluble
228 S D -0.6889 Soluble
229 F D -0.7302 Soluble
230 N D -1.5267 Soluble
231 R D -1.9466 Soluble
232 G D -1.8015 Soluble
233 E D -1.9990 Soluble
234 C D -0.5483 Soluble

3D Structure — colored by A4D score

Sequence - click residue to focus in viewer  |  colored by A4D score
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Color Legend (B-factor = A4D Score)
Score > 1.5 — highly aggregation-prone
Score 0.5–1.5 — aggregation-prone
Score ≈ 0 — buried
Score −1 to −0.5 — soluble
Score < −2.5 — highly soluble
pH Structure
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A4D Score Threshold
Highlight residues > threshold in the sequence panel
CDR Regions
HCDR1
HCDR2
HCDR3
LCDR1
LCDR2
LCDR3
Display Options

pH-Dependent Aggregation Profiles

A4D scores calculated across 11 pH conditions (4.0–9.0, step 0.5). Click a row to view the structure at that pH. The input structure is globular — max score is recommended for pH analysis.

pH Avg A4D Score Max A4D Score Downloads
4.0 -0.8663 1.7233 CSV PDB
4.5 -0.9173 1.6632 CSV PDB
5.0 -0.9786 1.5872 CSV PDB
5.5 -1.0382 1.5056 CSV PDB
6.0 -1.0838 1.4287 CSV PDB
6.5 -1.1058 1.3664 CSV PDB
7.0 -1.1036 1.3236 CSV PDB
7.5 -1.0848 1.3208 CSV PDB
8.0 -1.0569 1.4583 CSV PDB
8.5 -1.0227 1.5983 CSV PDB
9.0 -0.9827 1.7382 CSV PDB
Average A4D Score vs pH
Max A4D Score vs pH