Zanidatamab / 4lly

A4DAB304_4lly_A_B | Source PDB: 4lly | Chains: A, B | Done
96.46
Yes
10 Å
Yes
Avg A4D Score
-0.6793
Max Score
1.4197
Min Score
-3.1256
Total Score
-291.42
Score CDR
-0.2143
Score non-CDR
-0.7351

Calculation Parameters

Chain Sequence(s) EVQLVESGGGLVQPGGSLRLSCAASGFTFTDYTMDWVRKAPGKGLEWVADVNPNSGGSIYNQEFKGRFTLSVDRSKNTLYLQMNSLRAEDTAVYYCARNLGPSFYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVATGPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKRIQMTQSPSSLSASVGDRVTITCKASQDVSIGVAWYQDKPGKAPKLLIYSASYRYTGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYYIYPYTFGQGTKVEIKGQPKAAPSVTLFPPSSEELQANKATLVCYISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAAWSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAP input.pdb
Selected Chain(s) A (Heavy), B (Light)
Distance of Aggregation 10 Å
FoldX Energy Minimization Yes
pH Calculations Yes
Downloads Download all data (.tar.gz)

Aggrescan4D Profile

Aggregation-prone (score > 0)
Soluble (score < 0)
Buried (score = 0)

Per-Residue A4D Scores

Download CSV
Minimum Score -3.1256
Maximum Score 1.4197
Average Score -0.6793
Total Score -291.4169

Residues with A4D score > 0.0 are highlighted as aggregation-prone.

Index Residue Chain A4D Score Classification
1 E A -2.0702 Soluble
2 V A -1.2579 Soluble
3 Q A -1.3264 Soluble
4 L A 0.0000 Buried
5 V A 0.4265 Aggregation-prone
6 E A 0.0000 Buried
7 S A -0.4859 Soluble
8 G A -1.0207 Soluble
9 G A -0.7453 Soluble
11 G A 0.0000 Buried
12 L A -0.3674 Soluble
13 V A 0.0000 Buried
14 Q A -1.6926 Soluble
15 P A -1.8309 Soluble
16 G A -1.5199 Soluble
17 G A -1.2225 Soluble
18 S A -1.2794 Soluble
19 L A -1.1338 Soluble
20 R A -1.9662 Soluble
21 L A 0.0000 Buried
22 S A -0.2855 Soluble
23 C A 0.0000 Buried
24 A A -0.3208 Soluble
25 A A 0.0000 Buried
26 S A -0.9948 Soluble
27 G A -1.0883 Soluble
28 F A -0.6398 Soluble
29 T A -0.6041 Soluble
30 F A 0.0000 Buried
35 T A -1.6702 Soluble
36 D A -1.6877 Soluble
37 Y A -0.4262 Soluble
38 T A -0.2501 Soluble
39 M A 0.0000 Buried
40 D A 0.0000 Buried
41 W A 0.0000 Buried
42 V A 0.0000 Buried
43 R A 0.0000 Buried
44 K A -0.9197 Soluble
45 A A 0.0000 Buried
46 P A -1.2299 Soluble
47 G A -1.5676 Soluble
48 K A -2.3663 Soluble
49 G A -1.6906 Soluble
50 L A 0.0000 Buried
51 E A -1.2443 Soluble
52 W A 0.0000 Buried
53 V A 0.0000 Buried
54 A A 0.0000 Buried
55 D A 0.0000 Buried
56 V A 0.0000 Buried
57 N A -1.2503 Soluble
58 P A 0.0000 Buried
59 N A -2.1567 Soluble
62 S A -1.1696 Soluble
63 G A -1.2600 Soluble
64 G A -0.5885 Soluble
65 S A 0.2278 Aggregation-prone
66 I A 0.8890 Aggregation-prone
67 Y A -0.2545 Soluble
68 N A 0.0000 Buried
69 Q A -2.1046 Soluble
70 E A -2.2847 Soluble
71 F A 0.0000 Buried
72 K A -2.3909 Soluble
74 G A -1.6690 Soluble
75 R A 0.0000 Buried
76 F A 0.0000 Buried
77 T A -0.5515 Soluble
78 L A 0.0000 Buried
79 S A -0.3367 Soluble
80 V A -1.0754 Soluble
81 D A -1.9597 Soluble
82 R A -3.0758 Soluble
83 S A -2.2242 Soluble
84 K A -2.7652 Soluble
85 N A -2.2136 Soluble
86 T A 0.0000 Buried
87 L A 0.0000 Buried
88 Y A -0.1726 Soluble
89 L A 0.0000 Buried
90 Q A -0.9737 Soluble
91 M A 0.0000 Buried
92 N A -1.2795 Soluble
93 S A -1.2219 Soluble
94 L A 0.0000 Buried
95 R A -2.4830 Soluble
96 A A -1.8050 Soluble
97 E A -2.3131 Soluble
98 D A 0.0000 Buried
99 T A -0.7658 Soluble
100 A A 0.0000 Buried
101 V A 0.1771 Aggregation-prone
102 Y A 0.0000 Buried
103 Y A 0.0000 Buried
104 C A 0.0000 Buried
105 A A 0.0000 Buried
106 R A 0.0000 Buried
107 N A 0.0000 Buried
108 L A 1.1354 Aggregation-prone
109 G A 0.1463 Aggregation-prone
110 P A 0.3350 Aggregation-prone
112 S A 0.7291 Aggregation-prone
113 F A 0.8186 Aggregation-prone
114 Y A 0.6324 Aggregation-prone
115 F A 0.0000 Buried
116 D A -0.1212 Soluble
117 Y A -0.3221 Soluble
118 W A -0.5193 Soluble
119 G A 0.0000 Buried
120 Q A -1.4410 Soluble
121 G A 0.0000 Buried
122 T A -0.0867 Soluble
123 L A 0.1532 Aggregation-prone
124 V A 0.0000 Buried
125 T A -0.5312 Soluble
126 V A 0.0000 Buried
127 S A -1.0139 Soluble
128 S A -0.7121 Soluble
129 A A -0.4910 Soluble
130 S A -0.6448 Soluble
131 T A -0.8034 Soluble
132 K A -1.3330 Soluble
133 G A -1.4469 Soluble
134 P A -0.6308 Soluble
135 S A -0.3264 Soluble
136 V A 0.0000 Buried
137 F A 0.0000 Buried
138 P A -0.9653 Soluble
139 L A 0.0000 Buried
140 A A -1.4057 Soluble
141 P A 0.0000 Buried
142 S A -1.5142 Soluble
143 S A -1.4311 Soluble
144 K A -2.0616 Soluble
145 S A -1.0507 Soluble
146 T A -1.0210 Soluble
147 S A -0.9546 Soluble
148 G A -0.8018 Soluble
149 G A -0.8408 Soluble
150 T A -0.6278 Soluble
151 A A 0.0000 Buried
152 A A 0.0000 Buried
153 L A 0.0000 Buried
154 G A 0.0000 Buried
155 C A 0.0000 Buried
156 L A 0.0000 Buried
157 V A 0.0000 Buried
158 K A 0.0000 Buried
159 D A -0.3101 Soluble
160 Y A 0.0000 Buried
161 F A -0.2896 Soluble
162 P A 0.0000 Buried
163 E A -0.5581 Soluble
164 P A -0.7546 Soluble
165 V A -0.6980 Soluble
166 T A -0.5710 Soluble
167 V A -0.3275 Soluble
168 S A -0.3404 Soluble
169 W A 0.0000 Buried
170 N A -0.7289 Soluble
171 S A -0.6187 Soluble
172 G A -0.4990 Soluble
173 A A -0.1951 Soluble
174 L A 0.0336 Aggregation-prone
175 T A -0.1601 Soluble
176 S A -0.2470 Soluble
177 G A -0.3181 Soluble
178 V A 0.1386 Aggregation-prone
179 A A -0.0734 Soluble
180 T A -0.0216 Soluble
181 G A 0.0000 Buried
182 P A 0.0115 Aggregation-prone
183 A A 0.1578 Aggregation-prone
184 V A 0.0000 Buried
185 L A 1.0686 Aggregation-prone
186 Q A 0.1098 Aggregation-prone
187 S A -0.2786 Soluble
188 S A -0.2375 Soluble
189 G A -0.0127 Soluble
190 L A 0.1111 Aggregation-prone
191 Y A 0.3601 Aggregation-prone
192 S A 0.0000 Buried
193 L A 0.0000 Buried
194 S A 0.0000 Buried
195 S A 0.0000 Buried
196 V A 0.0000 Buried
197 V A 0.0000 Buried
198 T A -0.2449 Soluble
199 V A 0.0000 Buried
200 P A -0.5298 Soluble
201 S A -0.6026 Soluble
202 S A -0.5851 Soluble
203 S A -0.5814 Soluble
204 L A -0.7399 Soluble
205 G A -0.9219 Soluble
206 T A -0.7023 Soluble
207 Q A -0.9427 Soluble
208 T A -1.0054 Soluble
209 Y A 0.0000 Buried
210 I A -1.0297 Soluble
211 C A 0.0000 Buried
212 N A -1.4156 Soluble
213 V A 0.0000 Buried
214 N A -1.8624 Soluble
215 H A 0.0000 Buried
216 K A -2.7626 Soluble
217 P A -1.5804 Soluble
218 S A -1.7828 Soluble
219 N A -2.5455 Soluble
220 T A -2.0889 Soluble
221 K A -2.6988 Soluble
222 V A -1.6310 Soluble
223 D A -2.4587 Soluble
224 K A -1.9863 Soluble
225 K A -2.2228 Soluble
226 V A 0.0000 Buried
227 E A -2.6644 Soluble
228 P A -2.0619 Soluble
229 K A -2.4692 Soluble
1 R B -2.0884 Soluble
2 I B 0.0000 Buried
3 Q B -1.9940 Soluble
4 M B 0.0000 Buried
5 T B -1.3125 Soluble
6 Q B 0.0000 Buried
7 S B -0.7673 Soluble
8 P B -0.6000 Soluble
9 S B -0.8145 Soluble
10 S B -0.8615 Soluble
11 L B -0.7002 Soluble
12 S B -1.1762 Soluble
13 A B 0.0000 Buried
14 S B -1.1082 Soluble
15 V B -0.2525 Soluble
16 G B -0.8535 Soluble
17 D B -1.7358 Soluble
18 R B -2.3167 Soluble
19 V B 0.0000 Buried
20 T B -0.6210 Soluble
21 I B 0.0000 Buried
22 T B -0.7303 Soluble
23 C B 0.0000 Buried
24 K B -2.4415 Soluble
25 A B 0.0000 Buried
26 S B -1.9071 Soluble
27 Q B -1.9628 Soluble
28 D B -2.3084 Soluble
29 V B 0.0000 Buried
36 S B -0.5104 Soluble
37 I B 0.4719 Aggregation-prone
38 G B 0.0000 Buried
39 V B 0.0000 Buried
40 A B 0.0000 Buried
41 W B 0.0000 Buried
42 Y B 0.0000 Buried
43 Q B 0.0000 Buried
44 D B -1.3175 Soluble
45 K B -1.6571 Soluble
46 P B -1.2724 Soluble
47 G B -1.7181 Soluble
48 K B -2.6120 Soluble
49 A B -1.6863 Soluble
50 P B 0.0000 Buried
51 K B -1.5694 Soluble
52 L B 0.0000 Buried
53 L B 0.0000 Buried
54 I B 0.0000 Buried
55 Y B 0.6751 Aggregation-prone
56 S B 0.5500 Aggregation-prone
57 A B 0.0000 Buried
65 S B 0.2521 Aggregation-prone
66 Y B 0.9392 Aggregation-prone
67 R B -0.3369 Soluble
68 Y B -0.1444 Soluble
69 T B -0.2835 Soluble
70 G B -0.6295 Soluble
71 V B 0.0000 Buried
72 P B -0.5624 Soluble
74 S B -0.6831 Soluble
75 R B -0.7756 Soluble
76 F B 0.0000 Buried
77 S B -0.4115 Soluble
78 G B -0.2207 Soluble
79 S B -0.3887 Soluble
80 G B -0.8556 Soluble
83 S B -0.8078 Soluble
84 G B -1.4410 Soluble
85 T B -1.8910 Soluble
86 D B -2.2297 Soluble
87 F B 0.0000 Buried
88 T B -0.7269 Soluble
89 L B 0.0000 Buried
90 T B -0.6126 Soluble
91 I B 0.0000 Buried
92 S B -1.3408 Soluble
93 S B -1.1361 Soluble
94 L B 0.0000 Buried
95 Q B -0.7192 Soluble
96 P B -1.1962 Soluble
97 E B -1.4863 Soluble
98 D B 0.0000 Buried
99 F B -0.8869 Soluble
100 A B 0.0000 Buried
101 T B -0.9295 Soluble
102 Y B 0.0000 Buried
103 Y B 0.0000 Buried
104 C B 0.0000 Buried
105 Q B 0.0000 Buried
106 Q B 0.0000 Buried
107 Y B 0.0000 Buried
108 Y B 1.4197 Aggregation-prone
109 I B 1.0424 Aggregation-prone
114 Y B 0.7715 Aggregation-prone
115 P B 0.0586 Aggregation-prone
116 Y B 0.0000 Buried
117 T B -0.4306 Soluble
118 F B -0.5169 Soluble
119 G B 0.0000 Buried
120 Q B -1.8555 Soluble
121 G B 0.0000 Buried
122 T B 0.0000 Buried
123 K B -1.5797 Soluble
124 V B 0.0000 Buried
125 E B -1.3442 Soluble
126 I B 0.0000 Buried
127 K B -2.2242 Soluble
128 G B -1.4675 Soluble
129 Q B 0.0000 Buried
130 P B -1.6075 Soluble
131 K B -2.5247 Soluble
132 A B -1.4373 Soluble
133 A B -0.7510 Soluble
134 P B 0.0000 Buried
135 S B -0.5840 Soluble
136 V B 0.0000 Buried
137 T B -0.6795 Soluble
138 L B 0.0000 Buried
139 F B 0.0000 Buried
140 P B -0.3402 Soluble
141 P B 0.0000 Buried
142 S B -1.1269 Soluble
143 S B -1.7178 Soluble
144 E B -2.5156 Soluble
145 E B 0.0000 Buried
146 L B -1.8807 Soluble
147 Q B -2.3119 Soluble
148 A B -1.7879 Soluble
149 N B -2.4089 Soluble
150 K B -2.0068 Soluble
151 A B 0.0000 Buried
152 T B 0.0000 Buried
153 L B 0.0000 Buried
154 V B 0.0000 Buried
155 C B 0.0000 Buried
156 Y B 0.0000 Buried
157 I B 0.0000 Buried
158 S B -0.7113 Soluble
159 D B -1.4920 Soluble
160 F B 0.0000 Buried
161 Y B 0.0000 Buried
162 P B -1.5218 Soluble
163 G B -0.9879 Soluble
164 A B -0.2370 Soluble
165 V B -0.1699 Soluble
166 T B -0.1519 Soluble
167 V B -0.0542 Soluble
168 A B -0.5385 Soluble
169 W B 0.0000 Buried
170 K B -1.0737 Soluble
171 A B -1.1367 Soluble
172 D B -1.2345 Soluble
173 S B -0.8313 Soluble
174 S B -0.5990 Soluble
175 P B -0.8652 Soluble
176 V B -0.8986 Soluble
177 K B -1.7635 Soluble
178 A B -0.9516 Soluble
179 G B -0.9091 Soluble
180 V B -0.7638 Soluble
181 E B -0.8095 Soluble
182 T B -0.2067 Soluble
183 T B 0.0000 Buried
184 T B -0.1518 Soluble
185 P B -0.3583 Soluble
186 S B -0.6585 Soluble
187 K B -1.4053 Soluble
188 Q B -1.5120 Soluble
189 S B -1.6712 Soluble
190 N B -1.9063 Soluble
191 N B -2.2811 Soluble
192 K B -2.0500 Soluble
193 Y B 0.0000 Buried
194 A B 0.0000 Buried
195 A B 0.0000 Buried
196 W B 0.0000 Buried
197 S B 0.0000 Buried
198 Y B 0.0000 Buried
199 L B 0.0000 Buried
200 S B -0.5547 Soluble
201 L B -1.0047 Soluble
202 T B -1.5682 Soluble
203 P B -2.2583 Soluble
204 E B -3.0806 Soluble
205 Q B -2.3049 Soluble
206 W B 0.0000 Buried
207 K B -3.1256 Soluble
208 S B -2.3998 Soluble
209 H B -2.3423 Soluble
210 R B -2.4982 Soluble
211 S B -1.5345 Soluble
212 Y B 0.0000 Buried
213 S B 0.0000 Buried
214 C B 0.0000 Buried
215 Q B -1.0403 Soluble
216 V B 0.0000 Buried
217 T B -0.7078 Soluble
218 H B 0.0000 Buried
219 E B -2.2733 Soluble
220 G B -1.4580 Soluble
221 S B -0.8797 Soluble
222 T B -0.7128 Soluble
223 V B -0.6078 Soluble
224 E B -1.8866 Soluble
225 K B -1.5490 Soluble
226 T B -1.0940 Soluble
227 V B 0.0000 Buried
228 A B -0.9358 Soluble
229 P B -1.1431 Soluble

3D Structure — colored by A4D score

Sequence - click residue to focus in viewer  |  colored by A4D score
Load structure to view sequence…
Color Legend (B-factor = A4D Score)
Score > 1.5 — highly aggregation-prone
Score 0.5–1.5 — aggregation-prone
Score ≈ 0 — buried
Score −1 to −0.5 — soluble
Score < −2.5 — highly soluble
pH Structure
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A4D Score Threshold
Highlight residues > threshold in the sequence panel
CDR Regions
HCDR1
HCDR2
HCDR3
LCDR1
LCDR2
LCDR3
Display Options

pH-Dependent Aggregation Profiles

A4D scores calculated across 11 pH conditions (4.0–9.0, step 0.5). Click a row to view the structure at that pH. The input structure is globular — max score is recommended for pH analysis.

pH Avg A4D Score Max A4D Score Downloads
4.0 -0.7081 2.6383 CSV PDB
4.5 -0.7405 2.6383 CSV PDB
5.0 -0.7784 2.6383 CSV PDB
5.5 -0.8134 2.6383 CSV PDB
6.0 -0.8352 2.6383 CSV PDB
6.5 -0.8349 2.6383 CSV PDB
7.0 -0.8119 2.6383 CSV PDB
7.5 -0.774 2.6383 CSV PDB
8.0 -0.7285 2.6382 CSV PDB
8.5 -0.6783 2.6378 CSV PDB
9.0 -0.6241 2.6365 CSV PDB
Average A4D Score vs pH
Max A4D Score vs pH