Umizortamig1 / 3g5z

A4DAB282_3g5z_B_A | Source PDB: 3g5z | Chains: B, A | Done
95.51
Yes
10 Å
Yes
Avg A4D Score
-0.6974
Max Score
1.1211
Min Score
-3.7444
Total Score
-299.88
Score CDR
-0.5276
Score non-CDR
-0.7163

Calculation Parameters

Chain Sequence(s) DVQLQESGPSLVKPSQSLSLTCTVTGYSITSDFAWNWIRQFPGNKLEWMGYISYSGNTRYNPSLKSRISITRDTSSNQFFLQLNSVTPEDTATYYCATAGRGFPYWGQGTLVTVSAAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSDLYTMSSSVTVPSSTWPSETVTCSVAHPASSTTVDKKLEPRADILMTQSPSSMSVSLGDTVSITCHASQDIISNIGWLQQKPGKSFAGLIYHGTNLSDGVPSRFSGSGSGADYSLTISSLESEDFADYYCVQYAQFPWTFGGGTKLEIARADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE input.pdb
Selected Chain(s) B (Heavy), A (Light)
Distance of Aggregation 10 Å
FoldX Energy Minimization Yes
pH Calculations Yes
Downloads Download all data (.tar.gz)

Aggrescan4D Profile

Aggregation-prone (score > 0)
Soluble (score < 0)
Buried (score = 0)

Per-Residue A4D Scores

Download CSV
Minimum Score -3.7444
Maximum Score 1.1211
Average Score -0.6974
Total Score -299.8808

Residues with A4D score > 0.0 are highlighted as aggregation-prone.

Index Residue Chain A4D Score Classification
1 D B -2.0512 Soluble
2 V B 0.0000 Buried
3 Q B -2.0025 Soluble
4 L B 0.0000 Buried
5 Q B -1.8527 Soluble
6 E B 0.0000 Buried
7 S B -0.6571 Soluble
8 G B -0.4848 Soluble
9 P B -0.2938 Soluble
11 S B -0.0933 Soluble
12 L B -0.2210 Soluble
13 V B 0.0000 Buried
14 K B -2.0312 Soluble
15 P B -1.6188 Soluble
16 S B -1.4622 Soluble
17 Q B -2.0723 Soluble
18 S B -1.5772 Soluble
19 L B 0.0000 Buried
20 S B -0.7325 Soluble
21 L B 0.0000 Buried
22 T B -0.4456 Soluble
23 C B 0.0000 Buried
24 T B -0.9759 Soluble
25 V B 0.0000 Buried
26 T B -1.1458 Soluble
27 G B -1.1238 Soluble
28 Y B -0.6408 Soluble
29 S B -0.1645 Soluble
30 I B 0.0000 Buried
31 T B -0.1724 Soluble
35 S B -0.3176 Soluble
36 D B -0.5104 Soluble
37 F B -0.2497 Soluble
38 A B -0.4626 Soluble
39 W B 0.0000 Buried
40 N B 0.0000 Buried
41 W B 0.0000 Buried
42 I B 0.0000 Buried
43 R B 0.0000 Buried
44 Q B 0.0000 Buried
45 F B -1.1580 Soluble
46 P B -1.0305 Soluble
47 G B -1.5265 Soluble
48 N B -2.1189 Soluble
49 K B -2.3955 Soluble
50 L B 0.0000 Buried
51 E B -0.6623 Soluble
52 W B 0.0000 Buried
53 M B 0.0000 Buried
54 G B 0.0000 Buried
55 Y B 0.0000 Buried
56 I B 0.0000 Buried
57 S B -0.6681 Soluble
58 Y B 0.1178 Aggregation-prone
59 S B -0.4263 Soluble
63 G B -0.8993 Soluble
64 N B -1.6957 Soluble
65 T B -1.4931 Soluble
66 R B -2.0850 Soluble
67 Y B -1.1122 Soluble
68 N B -1.0516 Soluble
69 P B -1.3653 Soluble
70 S B -0.8852 Soluble
71 L B 0.0000 Buried
72 K B -2.2338 Soluble
74 S B -1.3581 Soluble
75 R B -1.3722 Soluble
76 I B 0.0000 Buried
77 S B -0.9140 Soluble
78 I B 0.0000 Buried
79 T B -0.6688 Soluble
80 R B -0.8551 Soluble
81 D B -1.1417 Soluble
82 T B -0.8239 Soluble
83 S B -0.6877 Soluble
84 S B -0.7468 Soluble
85 N B -0.7747 Soluble
86 Q B -0.8701 Soluble
87 F B 0.0000 Buried
88 F B -0.1788 Soluble
89 L B 0.0000 Buried
90 Q B -0.8572 Soluble
91 L B 0.0000 Buried
92 N B -1.4389 Soluble
93 S B -1.2984 Soluble
94 V B 0.0000 Buried
95 T B -1.4462 Soluble
96 P B -1.4113 Soluble
97 E B -1.9382 Soluble
98 D B 0.0000 Buried
99 T B -0.5566 Soluble
100 A B 0.0000 Buried
101 T B -0.1019 Soluble
102 Y B 0.0000 Buried
103 Y B 0.0000 Buried
104 C B 0.0000 Buried
105 A B 0.0000 Buried
106 T B 0.0000 Buried
107 A B 0.0000 Buried
108 G B -1.3395 Soluble
109 R B -2.2918 Soluble
114 G B 0.0000 Buried
115 F B 0.0000 Buried
116 P B -0.7139 Soluble
117 Y B -0.2003 Soluble
118 W B -0.3539 Soluble
119 G B 0.0000 Buried
120 Q B -1.9433 Soluble
121 G B 0.0000 Buried
122 T B -0.3803 Soluble
123 L B 0.2009 Aggregation-prone
124 V B 0.0000 Buried
125 T B 0.0000 Buried
126 V B 0.0000 Buried
127 S B -1.2338 Soluble
128 A B -1.0511 Soluble
129 A B -1.4084 Soluble
130 K B -2.0505 Soluble
131 T B -1.0632 Soluble
132 T B -0.8048 Soluble
133 P B -0.6321 Soluble
134 P B 0.0000 Buried
135 S B -0.4505 Soluble
136 V B 0.0000 Buried
137 Y B 0.0000 Buried
138 P B -1.1945 Soluble
139 L B 0.0000 Buried
140 A B 0.0000 Buried
141 P B -0.7505 Soluble
142 G B -1.0377 Soluble
143 C B -1.2820 Soluble
144 G B -1.5749 Soluble
145 D B -2.0171 Soluble
146 T B -1.1603 Soluble
147 T B -1.0093 Soluble
148 G B -0.9236 Soluble
149 S B -0.6767 Soluble
150 S B -0.5854 Soluble
151 V B 0.0000 Buried
152 T B -0.1366 Soluble
153 L B 0.0000 Buried
154 G B 0.0000 Buried
155 C B 0.0000 Buried
156 L B 0.0000 Buried
157 V B 0.0000 Buried
158 K B -0.3353 Soluble
159 G B -0.4704 Soluble
160 Y B 0.0000 Buried
161 F B 0.0000 Buried
162 P B 0.0000 Buried
163 E B -0.1416 Soluble
164 S B -0.1909 Soluble
165 V B 0.1015 Aggregation-prone
166 T B 0.0903 Aggregation-prone
167 V B -0.0427 Soluble
168 T B -0.3568 Soluble
169 W B 0.0000 Buried
170 N B -1.2871 Soluble
171 S B -0.6177 Soluble
172 G B -0.6753 Soluble
173 S B -0.5514 Soluble
174 L B -0.2558 Soluble
175 S B -0.4534 Soluble
176 S B -0.5407 Soluble
177 S B -0.4191 Soluble
178 V B 0.1588 Aggregation-prone
179 H B -0.2034 Soluble
180 T B 0.0430 Aggregation-prone
181 F B 0.0000 Buried
182 P B -0.3106 Soluble
183 A B 0.1914 Aggregation-prone
184 L B 0.5783 Aggregation-prone
185 L B 0.2084 Aggregation-prone
186 Q B -1.0224 Soluble
187 S B -1.2585 Soluble
188 D B -2.0281 Soluble
189 L B -0.7724 Soluble
190 Y B -0.0571 Soluble
191 T B 0.1459 Aggregation-prone
192 M B 0.2145 Aggregation-prone
193 S B 0.0000 Buried
194 S B 0.0000 Buried
195 S B 0.0000 Buried
196 V B 0.0000 Buried
197 T B -0.1262 Soluble
198 V B 0.0000 Buried
199 P B -0.5741 Soluble
200 S B -0.8180 Soluble
201 S B -0.7391 Soluble
202 T B -0.9648 Soluble
203 W B 0.0000 Buried
204 P B -1.3592 Soluble
205 S B -1.3093 Soluble
206 E B -2.1194 Soluble
207 T B -1.6836 Soluble
208 V B 0.0000 Buried
209 T B -1.8302 Soluble
210 C B 0.0000 Buried
211 S B 0.0000 Buried
212 V B 0.0000 Buried
213 A B -0.2070 Soluble
214 H B 0.0000 Buried
215 P B -0.4151 Soluble
216 A B -0.2505 Soluble
217 S B -0.3179 Soluble
218 S B -0.3367 Soluble
219 T B -0.3329 Soluble
220 T B -0.3177 Soluble
221 V B -0.5629 Soluble
222 D B -2.0594 Soluble
223 K B -2.1550 Soluble
224 K B -2.5890 Soluble
225 L B 0.0000 Buried
226 E B -2.5959 Soluble
227 P B -1.5829 Soluble
228 R B -1.2063 Soluble
229 A B -0.7451 Soluble
1 D A -1.4728 Soluble
2 I A -0.4890 Soluble
3 L A 0.8436 Aggregation-prone
4 M A 0.0000 Buried
5 T A -0.1689 Soluble
6 Q A -0.3655 Soluble
7 S A -0.5214 Soluble
8 P A -0.5330 Soluble
9 S A -0.6834 Soluble
10 S A -0.6964 Soluble
11 M A -0.2157 Soluble
12 S A -0.1291 Soluble
13 V A 0.1775 Aggregation-prone
14 S A 0.0073 Aggregation-prone
15 L A 0.4470 Aggregation-prone
16 G A -0.5837 Soluble
17 D A -0.7108 Soluble
18 T A -0.6215 Soluble
19 V A 0.0000 Buried
20 S A -0.3169 Soluble
21 I A 0.0000 Buried
22 T A -0.6591 Soluble
23 C A 0.0000 Buried
24 H A -1.2767 Soluble
25 A A 0.0000 Buried
26 S A -1.0158 Soluble
27 Q A -2.1620 Soluble
28 D A -2.3724 Soluble
29 I A 0.0000 Buried
36 I A 0.7081 Aggregation-prone
37 S A -0.1970 Soluble
38 N A -0.8503 Soluble
39 I A 0.0000 Buried
40 G A 0.0000 Buried
41 W A 0.0000 Buried
42 L A 0.0000 Buried
43 Q A 0.0000 Buried
44 Q A 0.0000 Buried
45 K A -1.7499 Soluble
46 P A -1.8659 Soluble
47 G A -1.7007 Soluble
48 K A -2.4719 Soluble
49 S A -1.5116 Soluble
50 F A 0.0000 Buried
51 A A -0.1446 Soluble
52 G A -0.2734 Soluble
53 L A 0.0000 Buried
54 I A 0.0000 Buried
55 Y A 0.0000 Buried
56 H A -1.3477 Soluble
57 G A 0.0000 Buried
65 T A -0.8454 Soluble
66 N A -1.3479 Soluble
67 L A -0.5657 Soluble
68 S A -1.2135 Soluble
69 D A -1.9587 Soluble
70 G A -1.2083 Soluble
71 V A -0.6360 Soluble
72 P A -0.5868 Soluble
74 S A -0.4547 Soluble
75 R A -0.8146 Soluble
76 F A 0.0000 Buried
77 S A -0.4183 Soluble
78 G A 0.0000 Buried
79 S A -0.8938 Soluble
80 G A -0.9628 Soluble
83 S A -0.8384 Soluble
84 G A -1.2105 Soluble
85 A A -1.7689 Soluble
86 D A -1.9685 Soluble
87 Y A 0.0000 Buried
88 S A -0.7101 Soluble
89 L A 0.0000 Buried
90 T A -0.3397 Soluble
91 I A 0.0000 Buried
92 S A -0.8188 Soluble
93 S A -0.9152 Soluble
94 L A 0.0000 Buried
95 E A -2.0768 Soluble
96 S A -2.0375 Soluble
97 E A -2.7176 Soluble
98 D A 0.0000 Buried
99 F A 0.0000 Buried
100 A A 0.0000 Buried
101 D A -0.9536 Soluble
102 Y A 0.0000 Buried
103 Y A 0.0000 Buried
104 C A 0.0000 Buried
105 V A 0.0000 Buried
106 Q A 0.0000 Buried
107 Y A 0.0000 Buried
108 A A -0.3872 Soluble
109 Q A -1.1609 Soluble
114 F A -0.2722 Soluble
115 P A -0.5273 Soluble
116 W A 0.0000 Buried
117 T A -0.0225 Soluble
118 F A 0.0261 Aggregation-prone
119 G A 0.0000 Buried
120 G A -1.0767 Soluble
121 G A -1.1048 Soluble
122 T A 0.0000 Buried
123 K A -1.1882 Soluble
124 L A 0.0000 Buried
125 E A -0.6738 Soluble
126 I A 0.0000 Buried
127 A A -0.3358 Soluble
128 R A -1.1741 Soluble
129 A A -1.2060 Soluble
130 D A -2.3464 Soluble
131 A A -1.3810 Soluble
132 A A -0.6929 Soluble
133 P A 0.0000 Buried
134 T A -0.1701 Soluble
135 V A 0.0000 Buried
136 S A -0.0493 Soluble
137 I A 0.0000 Buried
138 F A 0.0000 Buried
139 P A 0.0000 Buried
140 P A 0.0000 Buried
141 S A 0.0000 Buried
142 S A -0.8541 Soluble
143 E A -1.3605 Soluble
144 Q A 0.0000 Buried
145 L A -1.1497 Soluble
146 T A -0.7821 Soluble
147 S A -0.8783 Soluble
148 G A -1.2264 Soluble
149 G A -1.1674 Soluble
150 A A 0.0000 Buried
151 S A 0.0000 Buried
152 V A 0.0000 Buried
153 V A 0.0000 Buried
154 C A 0.0000 Buried
155 F A 0.0000 Buried
156 L A 0.0000 Buried
157 N A 0.0000 Buried
158 N A -1.1173 Soluble
159 F A 0.0000 Buried
160 Y A -1.7129 Soluble
161 P A -1.9061 Soluble
162 K A -2.3449 Soluble
163 D A -2.7295 Soluble
164 I A 0.0000 Buried
165 N A -2.2354 Soluble
166 V A -0.9145 Soluble
167 K A -2.0165 Soluble
168 W A 0.0000 Buried
169 K A -2.4160 Soluble
170 I A 0.0000 Buried
171 D A -2.3131 Soluble
172 G A -1.9122 Soluble
173 S A -2.0847 Soluble
174 E A -3.3235 Soluble
175 R A -2.8141 Soluble
176 Q A -2.6798 Soluble
177 N A -2.1607 Soluble
178 G A -0.9280 Soluble
179 V A -0.6392 Soluble
180 L A -0.1020 Soluble
181 N A -0.2630 Soluble
182 S A -0.1531 Soluble
183 W A -0.5180 Soluble
184 T A -0.9559 Soluble
185 D A -1.9793 Soluble
186 Q A -1.7972 Soluble
187 D A -1.9643 Soluble
188 S A -2.2659 Soluble
189 K A -2.5227 Soluble
190 D A -1.8148 Soluble
191 S A 0.0000 Buried
192 T A 0.0000 Buried
193 Y A 0.0000 Buried
194 S A 0.0000 Buried
195 M A 0.0000 Buried
196 S A 0.0000 Buried
197 S A 0.0000 Buried
198 T A 0.0000 Buried
199 L A 0.0000 Buried
200 T A -0.2576 Soluble
201 L A 0.0000 Buried
202 T A -1.6857 Soluble
203 K A -2.6982 Soluble
204 D A -3.6719 Soluble
205 E A -3.4061 Soluble
206 Y A 0.0000 Buried
207 E A -3.7444 Soluble
208 R A -3.7040 Soluble
209 H A -2.9837 Soluble
210 N A -2.5791 Soluble
211 S A -1.8190 Soluble
212 Y A 0.0000 Buried
213 T A -0.9227 Soluble
214 C A 0.0000 Buried
215 E A -0.4344 Soluble
216 A A 0.0000 Buried
217 T A -1.0454 Soluble
218 H A 0.0000 Buried
219 K A -2.4793 Soluble
220 T A -1.3578 Soluble
221 S A -0.8322 Soluble
222 T A -0.5388 Soluble
223 S A -0.2661 Soluble
224 P A -0.2420 Soluble
225 I A 0.7735 Aggregation-prone
226 V A 1.1211 Aggregation-prone
227 K A -0.0538 Soluble
228 S A -0.4296 Soluble
229 F A 0.0000 Buried
230 N A -2.2893 Soluble
231 R A -2.6372 Soluble
232 N A -2.9124 Soluble
233 E A -2.8411 Soluble

3D Structure — colored by A4D score

Sequence - click residue to focus in viewer  |  colored by A4D score
Load structure to view sequence…
Color Legend (B-factor = A4D Score)
Score > 1.5 — highly aggregation-prone
Score 0.5–1.5 — aggregation-prone
Score ≈ 0 — buried
Score −1 to −0.5 — soluble
Score < −2.5 — highly soluble
pH Structure
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A4D Score Threshold
Highlight residues > threshold in the sequence panel
CDR Regions
HCDR1
HCDR2
HCDR3
LCDR1
LCDR2
LCDR3
Display Options

pH-Dependent Aggregation Profiles

A4D scores calculated across 11 pH conditions (4.0–9.0, step 0.5). Click a row to view the structure at that pH. The input structure is globular — max score is recommended for pH analysis.

pH Avg A4D Score Max A4D Score Downloads
4.0 -0.5308 1.9463 CSV PDB
4.5 -0.5843 1.8806 CSV PDB
5.0 -0.648 1.832 CSV PDB
5.5 -0.7121 1.7835 CSV PDB
6.0 -0.7669 1.7357 CSV PDB
6.5 -0.8048 1.6876 CSV PDB
7.0 -0.8254 1.6388 CSV PDB
7.5 -0.8339 1.6262 CSV PDB
8.0 -0.8348 1.6259 CSV PDB
8.5 -0.8281 1.6624 CSV PDB
9.0 -0.812 1.7726 CSV PDB
Average A4D Score vs pH
Max A4D Score vs pH