Motavizumab / 6ywd

A4DAB172_6ywd_A_B | Source PDB: 6ywd | Chains: A, B | Done
100
Yes
10 Å
Yes
Avg A4D Score
-0.6717
Max Score
2.5099
Min Score
-3.772
Total Score
-292.87
Score CDR
-0.2355
Score non-CDR
-0.7232

Calculation Parameters

Chain Sequence(s) QVTLRESGPALVKPTQTLTLTCTFSGFSLSTAGMSVGWIRQPPGKALEWLADIWWDDKKHYNPSLKDRLTISKDTSKNQVVLKVTNMDPADTATYYCARDMIFNFYFDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDIQMTQSPSTLSASVGDRVTITCSASSRVGYMHWYQQKPGKAPKLLIYDTSKLASGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCFQGSGYPFTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC input.pdb
Selected Chain(s) A (Heavy), B (Light)
Distance of Aggregation 10 Å
FoldX Energy Minimization Yes
pH Calculations Yes
Downloads Download all data (.tar.gz)

Aggrescan4D Profile

Aggregation-prone (score > 0)
Soluble (score < 0)
Buried (score = 0)

Per-Residue A4D Scores

Download CSV
Minimum Score -3.772
Maximum Score 2.5099
Average Score -0.6717
Total Score -292.872

Residues with A4D score > 0.0 are highlighted as aggregation-prone.

Index Residue Chain A4D Score Classification
1 Q A -1.1720 Soluble
2 V A -0.4287 Soluble
3 T A -0.8004 Soluble
4 L A 0.0000 Buried
5 R A -2.2905 Soluble
6 E A 0.0000 Buried
7 S A -0.7783 Soluble
8 G A -0.3068 Soluble
9 P A -0.3387 Soluble
11 A A -0.3689 Soluble
12 L A -0.4002 Soluble
13 V A 0.0000 Buried
14 K A -2.3135 Soluble
15 P A -1.9751 Soluble
16 T A -1.9589 Soluble
17 Q A -2.1819 Soluble
18 T A -1.5796 Soluble
19 L A 0.0000 Buried
20 T A -0.5540 Soluble
21 L A 0.0000 Buried
22 T A -0.5310 Soluble
23 C A 0.0000 Buried
24 T A -1.1463 Soluble
25 F A 0.0000 Buried
26 S A -0.8627 Soluble
27 G A -0.7727 Soluble
28 F A -0.2833 Soluble
29 S A -0.3798 Soluble
30 L A 0.0000 Buried
31 S A -0.5703 Soluble
34 T A -0.0965 Soluble
35 A A 0.1405 Aggregation-prone
36 G A 0.0000 Buried
37 M A 0.6971 Aggregation-prone
38 S A 0.0000 Buried
39 V A 0.0000 Buried
40 G A 0.0000 Buried
41 W A 0.0000 Buried
42 I A 0.0000 Buried
43 R A 0.0000 Buried
44 Q A -0.8492 Soluble
45 P A 0.0000 Buried
46 P A -1.0725 Soluble
47 G A -1.4409 Soluble
48 K A -2.1746 Soluble
49 A A -1.2476 Soluble
50 L A 0.0000 Buried
51 E A -0.7383 Soluble
52 W A 0.0000 Buried
53 L A 0.0000 Buried
54 A A 0.0000 Buried
55 D A 0.0000 Buried
56 I A 0.0000 Buried
57 W A 0.0000 Buried
58 W A -0.9846 Soluble
59 D A -2.0550 Soluble
63 D A -3.2567 Soluble
64 K A -3.2996 Soluble
65 K A -2.4773 Soluble
66 H A -0.8584 Soluble
67 Y A -0.4435 Soluble
68 N A 0.0000 Buried
69 P A -1.0043 Soluble
70 S A -1.0394 Soluble
71 L A 0.0000 Buried
72 K A -2.7097 Soluble
74 D A -2.9092 Soluble
75 R A -2.1783 Soluble
76 L A 0.0000 Buried
77 T A -0.9915 Soluble
78 I A 0.0000 Buried
79 S A -1.0699 Soluble
80 K A -1.3496 Soluble
81 D A -1.6861 Soluble
82 T A -1.2535 Soluble
83 S A -1.4580 Soluble
84 K A -2.2760 Soluble
85 N A -1.6104 Soluble
86 Q A -1.4949 Soluble
87 V A 0.0000 Buried
88 V A -0.2592 Soluble
89 L A 0.0000 Buried
90 K A -0.9406 Soluble
91 V A 0.0000 Buried
92 T A -1.7477 Soluble
93 N A -2.4604 Soluble
94 M A 0.0000 Buried
95 D A -2.1219 Soluble
96 P A -1.2497 Soluble
97 A A -0.5134 Soluble
98 D A 0.0000 Buried
99 T A -0.3461 Soluble
100 A A 0.0000 Buried
101 T A -0.3813 Soluble
102 Y A 0.0000 Buried
103 Y A 0.0000 Buried
104 C A 0.0000 Buried
105 A A 0.0000 Buried
106 R A 0.0000 Buried
107 D A 0.0000 Buried
108 M A 1.4221 Aggregation-prone
109 I A 2.1950 Aggregation-prone
110 F A 2.5099 Aggregation-prone
112 N A 1.2635 Aggregation-prone
113 F A 1.3350 Aggregation-prone
114 Y A 0.0000 Buried
115 F A 0.0000 Buried
116 D A -0.3472 Soluble
117 V A -0.1882 Soluble
118 W A 0.0000 Buried
119 G A 0.0000 Buried
120 Q A -2.0543 Soluble
121 G A -1.4031 Soluble
122 T A 0.0000 Buried
123 T A -0.2302 Soluble
124 V A 0.0000 Buried
125 T A 0.0000 Buried
126 V A 0.0000 Buried
127 S A -0.8962 Soluble
128 S A -0.7935 Soluble
129 A A -0.5590 Soluble
130 S A -0.6383 Soluble
131 T A -0.7907 Soluble
132 K A -1.2920 Soluble
133 G A -1.4544 Soluble
134 P A -0.6557 Soluble
135 S A -0.4834 Soluble
136 V A 0.0000 Buried
137 F A 0.0000 Buried
138 P A -1.0936 Soluble
139 L A 0.0000 Buried
140 A A -0.8779 Soluble
141 P A 0.0000 Buried
142 S A 0.0000 Buried
143 S A -0.9448 Soluble
144 K A -1.8750 Soluble
145 S A -1.0548 Soluble
146 T A 0.0000 Buried
147 S A -0.9827 Soluble
148 G A -1.0397 Soluble
149 G A -0.8332 Soluble
150 T A -0.6007 Soluble
151 A A 0.0000 Buried
152 A A 0.0000 Buried
153 L A 0.0000 Buried
154 G A 0.0000 Buried
155 C A 0.0000 Buried
156 L A 0.0000 Buried
157 V A 0.0000 Buried
158 K A 0.0000 Buried
159 D A -0.5434 Soluble
160 Y A 0.0000 Buried
161 F A 0.0000 Buried
162 P A 0.0000 Buried
163 E A -0.5744 Soluble
164 P A -0.5893 Soluble
165 V A -0.5985 Soluble
166 T A -0.5311 Soluble
167 V A -0.2665 Soluble
168 S A -0.3183 Soluble
169 W A 0.0000 Buried
170 N A -0.6784 Soluble
171 S A -0.6032 Soluble
172 G A -0.5342 Soluble
173 A A -0.2270 Soluble
174 L A 0.0413 Aggregation-prone
175 T A -0.1500 Soluble
176 S A -0.1782 Soluble
177 G A -0.1620 Soluble
178 V A 0.2291 Aggregation-prone
179 H A -0.2300 Soluble
180 T A -0.1092 Soluble
181 F A 0.0000 Buried
182 P A -0.2252 Soluble
183 A A 0.3464 Aggregation-prone
184 V A 0.6591 Aggregation-prone
185 L A 1.2283 Aggregation-prone
186 Q A 0.0721 Aggregation-prone
187 S A -0.3768 Soluble
188 S A -0.2893 Soluble
189 G A -0.1074 Soluble
190 L A 0.1110 Aggregation-prone
191 Y A 0.4635 Aggregation-prone
192 S A 0.0000 Buried
193 L A 0.0000 Buried
194 S A 0.0000 Buried
195 S A 0.0000 Buried
196 V A 0.0000 Buried
197 V A 0.0000 Buried
198 T A -0.1090 Soluble
199 V A 0.0000 Buried
200 P A -0.4788 Soluble
201 S A -0.5338 Soluble
202 S A -0.5392 Soluble
203 S A -0.5408 Soluble
204 L A -0.7552 Soluble
205 G A -1.0413 Soluble
206 T A -0.6919 Soluble
207 Q A -1.1829 Soluble
208 T A -1.0429 Soluble
209 Y A 0.0000 Buried
210 I A -0.8136 Soluble
211 C A 0.0000 Buried
212 N A -1.2446 Soluble
213 V A 0.0000 Buried
214 N A -1.7999 Soluble
215 H A 0.0000 Buried
216 K A -2.5907 Soluble
217 P A -1.5291 Soluble
218 S A -1.7934 Soluble
219 N A -2.5604 Soluble
220 T A -2.0424 Soluble
221 K A -2.5289 Soluble
222 V A -1.3516 Soluble
223 D A -1.9481 Soluble
224 K A -1.5756 Soluble
225 K A -1.9277 Soluble
226 V A 0.0000 Buried
227 E A -2.4406 Soluble
228 P A -1.4082 Soluble
229 K A -0.9426 Soluble
230 S A -0.3706 Soluble
231 C A 0.4819 Aggregation-prone
1 D B -1.9904 Soluble
2 I B -1.5107 Soluble
3 Q B -1.7298 Soluble
4 M B 0.0000 Buried
5 T B -0.7991 Soluble
6 Q B 0.0000 Buried
7 S B -0.5337 Soluble
8 P B -0.4657 Soluble
9 S B -0.6553 Soluble
10 T B -0.6372 Soluble
11 L B -0.5431 Soluble
12 S B -0.7903 Soluble
13 A B -1.0487 Soluble
14 S B -0.8959 Soluble
15 V B -0.2976 Soluble
16 G B -0.8228 Soluble
17 D B -1.7274 Soluble
18 R B -2.3427 Soluble
19 V B 0.0000 Buried
20 T B -0.6211 Soluble
21 I B 0.0000 Buried
22 T B -0.5928 Soluble
23 C B 0.0000 Buried
24 S B -1.3842 Soluble
25 A B -1.5270 Soluble
26 S B -1.5388 Soluble
27 S B -1.8262 Soluble
28 R B -2.2226 Soluble
29 V B 0.0000 Buried
37 G B -0.4536 Soluble
38 Y B 0.6369 Aggregation-prone
39 M B 0.0000 Buried
40 H B 0.0000 Buried
41 W B 0.0000 Buried
42 Y B 0.0000 Buried
43 Q B 0.0000 Buried
44 Q B 0.0000 Buried
45 K B -1.5428 Soluble
46 P B -1.1755 Soluble
47 G B -1.5770 Soluble
48 K B -2.3038 Soluble
49 A B -1.6234 Soluble
50 P B 0.0000 Buried
51 K B -1.8578 Soluble
52 L B 0.0000 Buried
53 L B 0.0000 Buried
54 I B 0.0000 Buried
55 Y B -0.0870 Soluble
56 D B -0.1184 Soluble
57 T B -0.2948 Soluble
65 S B -0.8113 Soluble
66 K B -1.3902 Soluble
67 L B -0.3742 Soluble
68 A B -0.5071 Soluble
69 S B -0.4363 Soluble
70 G B -0.4410 Soluble
71 V B -0.4747 Soluble
72 P B -0.3237 Soluble
74 S B -0.4266 Soluble
75 R B -0.8472 Soluble
76 F B 0.0000 Buried
77 S B -0.6115 Soluble
78 G B 0.0000 Buried
79 S B -0.7916 Soluble
80 G B -0.9253 Soluble
83 S B -1.1527 Soluble
84 G B -1.5041 Soluble
85 T B -1.7368 Soluble
86 E B -2.3749 Soluble
87 F B 0.0000 Buried
88 T B -0.6685 Soluble
89 L B 0.0000 Buried
90 T B -0.6284 Soluble
91 I B 0.0000 Buried
92 S B -1.4687 Soluble
93 S B -1.2172 Soluble
94 L B 0.0000 Buried
95 Q B -1.2775 Soluble
96 P B -1.9054 Soluble
97 D B -2.4906 Soluble
98 D B 0.0000 Buried
99 F B 0.0000 Buried
100 A B 0.0000 Buried
101 T B -0.5845 Soluble
102 Y B 0.0000 Buried
103 Y B 0.0000 Buried
104 C B 0.0000 Buried
105 F B 0.0000 Buried
106 Q B 0.0000 Buried
107 G B 0.0000 Buried
108 S B -0.0731 Soluble
109 G B -0.1456 Soluble
114 Y B 0.1970 Aggregation-prone
115 P B 0.0000 Buried
116 F B 0.0000 Buried
117 T B -0.5712 Soluble
118 F B 0.0000 Buried
119 G B 0.0000 Buried
120 G B -1.0228 Soluble
121 G B -0.8476 Soluble
122 T B 0.0000 Buried
123 K B -1.1520 Soluble
124 V B 0.0000 Buried
125 E B -1.2903 Soluble
126 I B 0.0000 Buried
127 K B -1.2679 Soluble
128 R B -0.7839 Soluble
129 T B 0.0046 Aggregation-prone
130 V B 0.5116 Aggregation-prone
131 A B 0.0581 Aggregation-prone
132 A B -0.0597 Soluble
133 P B 0.0000 Buried
134 S B -0.2582 Soluble
135 V B 0.0000 Buried
136 F B 0.0000 Buried
137 I B 0.0000 Buried
138 F B 0.0000 Buried
139 P B -0.4730 Soluble
140 P B 0.0000 Buried
141 S B 0.0000 Buried
142 D B -2.9240 Soluble
143 E B -2.9925 Soluble
144 Q B 0.0000 Buried
145 L B -2.3102 Soluble
146 K B -2.9056 Soluble
147 S B -1.8147 Soluble
148 G B -1.4438 Soluble
149 T B -1.2675 Soluble
150 A B 0.0000 Buried
151 S B 0.0000 Buried
152 V B 0.0000 Buried
153 V B 0.0000 Buried
154 C B 0.0000 Buried
155 L B 0.0000 Buried
156 L B 0.0000 Buried
157 N B 0.0000 Buried
158 N B -0.8363 Soluble
159 F B 0.0000 Buried
160 Y B -0.9977 Soluble
161 P B -1.6900 Soluble
162 R B -3.0159 Soluble
163 E B -3.2401 Soluble
164 A B -2.5079 Soluble
165 K B -2.6424 Soluble
166 V B 0.0000 Buried
167 Q B -0.9384 Soluble
168 W B 0.0000 Buried
169 K B -0.6197 Soluble
170 V B 0.0000 Buried
171 D B -1.7728 Soluble
172 N B -1.3499 Soluble
173 A B -0.2580 Soluble
174 L B 0.7141 Aggregation-prone
175 Q B -0.3328 Soluble
176 S B -0.8053 Soluble
177 G B -1.3177 Soluble
178 N B -1.6291 Soluble
179 S B -1.5584 Soluble
180 Q B -1.5767 Soluble
181 E B -1.5045 Soluble
182 S B -0.7329 Soluble
183 V B -0.8232 Soluble
184 T B -0.8781 Soluble
185 E B -1.5819 Soluble
186 Q B 0.0000 Buried
187 D B -2.0301 Soluble
188 S B -2.2902 Soluble
189 K B -2.6529 Soluble
190 D B -1.8224 Soluble
191 S B 0.0000 Buried
192 T B 0.0000 Buried
193 Y B 0.0000 Buried
194 S B 0.0000 Buried
195 L B 0.0000 Buried
196 S B 0.0000 Buried
197 S B 0.0000 Buried
198 T B -0.7505 Soluble
199 L B 0.0000 Buried
200 T B -0.6955 Soluble
201 L B -0.9111 Soluble
202 S B -1.3928 Soluble
203 K B -2.2451 Soluble
204 A B -2.1213 Soluble
205 D B -2.9349 Soluble
206 Y B 0.0000 Buried
207 E B -3.7024 Soluble
208 K B -3.7720 Soluble
209 H B -3.2939 Soluble
210 K B -3.2342 Soluble
211 V B -1.6980 Soluble
212 Y B 0.0000 Buried
213 A B 0.0000 Buried
214 C B 0.0000 Buried
215 E B -0.9029 Soluble
216 V B 0.0000 Buried
217 T B -1.2623 Soluble
218 H B 0.0000 Buried
219 Q B -1.7260 Soluble
220 G B -0.3662 Soluble
221 L B -0.1908 Soluble
222 S B -0.4203 Soluble
223 S B -0.4104 Soluble
224 P B -0.5356 Soluble
225 V B 0.1035 Aggregation-prone
226 T B -0.3267 Soluble
227 K B -0.5714 Soluble
228 S B -0.6553 Soluble
229 F B 0.0000 Buried
230 N B -1.8343 Soluble
231 R B -2.3262 Soluble
232 G B -1.4055 Soluble
233 E B -0.8612 Soluble
234 C B 0.3735 Aggregation-prone

3D Structure — colored by A4D score

Sequence - click residue to focus in viewer  |  colored by A4D score
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Color Legend (B-factor = A4D Score)
Score > 1.5 — highly aggregation-prone
Score 0.5–1.5 — aggregation-prone
Score ≈ 0 — buried
Score −1 to −0.5 — soluble
Score < −2.5 — highly soluble
pH Structure
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A4D Score Threshold
Highlight residues > threshold in the sequence panel
CDR Regions
HCDR1
HCDR2
HCDR3
LCDR1
LCDR2
LCDR3
Display Options

pH-Dependent Aggregation Profiles

A4D scores calculated across 11 pH conditions (4.0–9.0, step 0.5). Click a row to view the structure at that pH. The input structure is globular — max score is recommended for pH analysis.

pH Avg A4D Score Max A4D Score Downloads
4.0 -0.7279 5.2089 CSV PDB
4.5 -0.7673 5.2089 CSV PDB
5.0 -0.8123 5.2089 CSV PDB
5.5 -0.8533 5.2089 CSV PDB
6.0 -0.879 5.2089 CSV PDB
6.5 -0.881 5.2089 CSV PDB
7.0 -0.8599 5.2089 CSV PDB
7.5 -0.824 5.2089 CSV PDB
8.0 -0.7799 5.2089 CSV PDB
8.5 -0.7294 5.2089 CSV PDB
9.0 -0.6716 5.2089 CSV PDB
Average A4D Score vs pH
Max A4D Score vs pH