Zanidatamab / 4llw

A4DAB304_4llw_A_B | Source PDB: 4llw | Chains: A, B | Done
97.35
Yes
10 Å
Yes
Avg A4D Score
-0.631
Max Score
1.9502
Min Score
-3.0592
Total Score
-265.02
Score CDR
-0.1663
Score non-CDR
-0.6882

Calculation Parameters

Chain Sequence(s) EVQLVESGGGLVQPGGSLRLSCAASGFTFTDYTMDWVRYAPGKGLEWVADVNPNSGGSIYNQRFKGRFTLSVDRSKNTLYLQMNSLRAEDTAVYYCARNLGPSFYFDYWGQGTLVTVSSASTKGPSVFPLAPGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKDIQMTQSPSSLSASVGDRVTITCKASQDVSIGVAWYQRKPGKAPKLLIYSASYRYTGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYYIYPYTFGQGTKVEIKGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT input.pdb
Selected Chain(s) A (Heavy), B (Light)
Distance of Aggregation 10 Å
FoldX Energy Minimization Yes
pH Calculations Yes
Downloads Download all data (.tar.gz)

Aggrescan4D Profile

Aggregation-prone (score > 0)
Soluble (score < 0)
Buried (score = 0)

Per-Residue A4D Scores

Download CSV
Minimum Score -3.0592
Maximum Score 1.9502
Average Score -0.631
Total Score -265.0177

Residues with A4D score > 0.0 are highlighted as aggregation-prone.

Index Residue Chain A4D Score Classification
1 E A -2.1197 Soluble
2 V A -1.2112 Soluble
3 Q A -1.4700 Soluble
4 L A 0.0000 Buried
5 V A 0.1940 Aggregation-prone
6 E A 0.0000 Buried
7 S A -0.5681 Soluble
8 G A -0.8656 Soluble
9 G A -0.4933 Soluble
11 G A -0.4943 Soluble
12 L A -0.0754 Soluble
13 V A 0.0000 Buried
14 Q A -1.7879 Soluble
15 P A -1.9630 Soluble
16 G A -1.5826 Soluble
17 G A -1.1608 Soluble
18 S A -1.1815 Soluble
19 L A -1.0931 Soluble
20 R A -2.1817 Soluble
21 L A 0.0000 Buried
22 S A -0.4870 Soluble
23 C A 0.0000 Buried
24 A A -0.4914 Soluble
25 A A 0.0000 Buried
26 S A -1.1738 Soluble
27 G A -1.1316 Soluble
28 F A -0.6978 Soluble
29 T A -0.6511 Soluble
30 F A 0.0000 Buried
35 T A -1.6791 Soluble
36 D A -1.9222 Soluble
37 Y A -0.7733 Soluble
38 T A -0.6205 Soluble
39 M A 0.0000 Buried
40 D A 0.0000 Buried
41 W A 0.0000 Buried
42 V A 0.0000 Buried
43 R A 0.0000 Buried
44 Y A 0.0000 Buried
45 A A -0.9294 Soluble
46 P A -1.0010 Soluble
47 G A -1.5793 Soluble
48 K A -2.2663 Soluble
49 G A 0.0000 Buried
50 L A 0.0000 Buried
51 E A -0.6742 Soluble
52 W A 0.0000 Buried
53 V A 0.0000 Buried
54 A A 0.0000 Buried
55 D A 0.0000 Buried
56 V A 0.0000 Buried
57 N A -1.1434 Soluble
58 P A 0.0000 Buried
59 N A -2.0582 Soluble
62 S A -1.2601 Soluble
63 G A -1.1808 Soluble
64 G A -0.6314 Soluble
65 S A 0.1778 Aggregation-prone
66 I A 0.7502 Aggregation-prone
67 Y A -0.5768 Soluble
68 N A -1.3557 Soluble
69 Q A -2.7690 Soluble
70 R A -3.0138 Soluble
71 F A 0.0000 Buried
72 K A -2.7231 Soluble
74 G A -1.9415 Soluble
75 R A -1.6476 Soluble
76 F A 0.0000 Buried
77 T A -0.8245 Soluble
78 L A 0.0000 Buried
79 S A -0.4613 Soluble
80 V A -0.8397 Soluble
81 D A -1.7326 Soluble
82 R A -2.4753 Soluble
83 S A -2.0038 Soluble
84 K A -2.7059 Soluble
85 N A -2.2127 Soluble
86 T A 0.0000 Buried
87 L A 0.0000 Buried
88 Y A -0.5492 Soluble
89 L A 0.0000 Buried
90 Q A -1.4723 Soluble
91 M A 0.0000 Buried
92 N A -1.4666 Soluble
93 S A -1.4014 Soluble
94 L A 0.0000 Buried
95 R A -2.9163 Soluble
96 A A -2.0439 Soluble
97 E A -2.3731 Soluble
98 D A 0.0000 Buried
99 T A -0.7398 Soluble
100 A A 0.0000 Buried
101 V A 0.2823 Aggregation-prone
102 Y A 0.0000 Buried
103 Y A 0.0000 Buried
104 C A 0.0000 Buried
105 A A 0.0000 Buried
106 R A 0.0000 Buried
107 N A 0.0000 Buried
108 L A 0.8965 Aggregation-prone
109 G A 0.0293 Aggregation-prone
110 P A -0.0546 Soluble
112 S A 0.5051 Aggregation-prone
113 F A 0.7825 Aggregation-prone
114 Y A 0.0000 Buried
115 F A 0.0000 Buried
116 D A 0.0000 Buried
117 Y A 0.2354 Aggregation-prone
118 W A -0.3548 Soluble
119 G A 0.0000 Buried
120 Q A -1.4772 Soluble
121 G A -0.7206 Soluble
122 T A -0.0845 Soluble
123 L A 0.3382 Aggregation-prone
124 V A 0.0000 Buried
125 T A 0.0000 Buried
126 V A 0.0000 Buried
127 S A -1.1749 Soluble
128 S A -0.9447 Soluble
129 A A -0.5993 Soluble
130 S A -0.8049 Soluble
131 T A -0.9464 Soluble
132 K A -1.8027 Soluble
133 G A -1.8862 Soluble
134 P A -0.9732 Soluble
135 S A -0.4378 Soluble
136 V A 0.0000 Buried
137 F A 0.0000 Buried
138 P A -1.3192 Soluble
139 L A 0.0000 Buried
140 A A -1.3508 Soluble
141 P A -0.7921 Soluble
142 G A -0.6292 Soluble
143 T A -0.4537 Soluble
144 A A -0.2376 Soluble
145 A A -0.1155 Soluble
146 L A 0.0000 Buried
147 G A 0.0000 Buried
148 C A 0.0000 Buried
149 L A 0.0000 Buried
150 V A 0.0000 Buried
151 K A 0.0000 Buried
152 D A -0.7570 Soluble
153 Y A 0.0000 Buried
154 F A 0.0000 Buried
155 P A 0.0000 Buried
156 E A -0.6334 Soluble
157 P A -0.9104 Soluble
158 V A -1.0010 Soluble
159 T A -0.8437 Soluble
160 V A -0.5039 Soluble
161 S A -0.4334 Soluble
162 W A 0.0000 Buried
163 N A -0.6716 Soluble
164 S A -0.5728 Soluble
165 G A -0.4601 Soluble
166 A A -0.2001 Soluble
167 L A 0.0276 Aggregation-prone
168 T A -0.2030 Soluble
169 S A -0.2906 Soluble
170 G A -0.4034 Soluble
171 V A 0.0421 Aggregation-prone
172 H A -0.4436 Soluble
173 T A -0.2646 Soluble
174 F A 0.0000 Buried
175 P A 0.0892 Aggregation-prone
176 A A 0.4221 Aggregation-prone
177 V A 1.0128 Aggregation-prone
178 L A 1.3994 Aggregation-prone
179 Q A 0.3524 Aggregation-prone
180 S A -0.0557 Soluble
181 S A -0.2223 Soluble
182 G A 0.0247 Aggregation-prone
183 L A 0.0019 Aggregation-prone
184 Y A 0.3356 Aggregation-prone
185 S A 0.0000 Buried
186 L A 0.0000 Buried
187 S A 0.0000 Buried
188 S A 0.0000 Buried
189 V A 0.0000 Buried
190 V A 0.0000 Buried
191 T A -0.2450 Soluble
192 V A 0.0000 Buried
193 P A -0.5256 Soluble
194 S A -0.4877 Soluble
195 S A -0.5681 Soluble
196 S A -0.5171 Soluble
197 L A -0.6789 Soluble
198 G A -0.8870 Soluble
199 T A -0.6238 Soluble
200 Q A -0.8370 Soluble
201 T A -1.0002 Soluble
202 Y A 0.0000 Buried
203 I A -1.1614 Soluble
204 C A 0.0000 Buried
205 N A -1.4814 Soluble
206 V A 0.0000 Buried
207 N A -2.5336 Soluble
208 H A 0.0000 Buried
209 K A -2.9851 Soluble
210 P A -1.8070 Soluble
211 S A -2.1383 Soluble
212 N A -2.5789 Soluble
213 T A -2.3317 Soluble
214 K A -2.8727 Soluble
215 V A -1.4530 Soluble
216 D A -2.1912 Soluble
217 K A -1.8758 Soluble
218 K A -2.4985 Soluble
219 V A 0.0000 Buried
220 E A -2.7825 Soluble
221 P A -1.8958 Soluble
222 K A -2.2833 Soluble
1 D B -2.1472 Soluble
2 I B 0.0000 Buried
3 Q B -2.1620 Soluble
4 M B 0.0000 Buried
5 T B -1.1866 Soluble
6 Q B 0.0000 Buried
7 S B -0.6928 Soluble
8 P B -0.4687 Soluble
9 S B -0.7783 Soluble
10 S B -0.6913 Soluble
11 L B -0.3033 Soluble
12 S B -0.5155 Soluble
13 A B 0.0000 Buried
14 S B -0.1849 Soluble
15 V B 0.5645 Aggregation-prone
16 G B -0.6364 Soluble
17 D B -1.6168 Soluble
18 R B -2.2847 Soluble
19 V B 0.0000 Buried
20 T B -0.6506 Soluble
21 I B 0.0000 Buried
22 T B -0.7107 Soluble
23 C B 0.0000 Buried
24 K B -2.1238 Soluble
25 A B 0.0000 Buried
26 S B -2.0655 Soluble
27 Q B -2.5475 Soluble
28 D B -2.3330 Soluble
29 V B 0.0000 Buried
36 S B -0.2756 Soluble
37 I B 0.7885 Aggregation-prone
38 G B 0.0000 Buried
39 V B 0.0000 Buried
40 A B 0.0000 Buried
41 W B 0.0000 Buried
42 Y B 0.0000 Buried
43 Q B 0.0000 Buried
44 R B 0.0000 Buried
45 K B -1.8152 Soluble
46 P B -1.5471 Soluble
47 G B -1.6722 Soluble
48 K B -2.6239 Soluble
49 A B -1.5969 Soluble
50 P B 0.0000 Buried
51 K B -1.4969 Soluble
52 L B 0.0000 Buried
53 L B 0.0000 Buried
54 I B 0.0000 Buried
55 Y B 0.6383 Aggregation-prone
56 S B 0.7542 Aggregation-prone
57 A B 0.0000 Buried
65 S B 0.2554 Aggregation-prone
66 Y B 0.6572 Aggregation-prone
67 R B -0.7754 Soluble
68 Y B -0.2611 Soluble
69 T B -0.3820 Soluble
70 G B -0.7144 Soluble
71 V B 0.0000 Buried
72 P B -0.6180 Soluble
74 S B -0.7404 Soluble
75 R B -0.9225 Soluble
76 F B 0.0000 Buried
77 S B -0.4714 Soluble
78 G B -0.2492 Soluble
79 S B -0.3622 Soluble
80 G B -0.8254 Soluble
83 S B -0.7808 Soluble
84 G B -1.4573 Soluble
85 T B -1.9598 Soluble
86 D B -2.3419 Soluble
87 F B 0.0000 Buried
88 T B -0.7234 Soluble
89 L B 0.0000 Buried
90 T B -0.6104 Soluble
91 I B 0.0000 Buried
92 S B -1.2991 Soluble
93 S B -1.1348 Soluble
94 L B 0.0000 Buried
95 Q B -0.7817 Soluble
96 P B -0.7941 Soluble
97 E B -1.8464 Soluble
98 D B 0.0000 Buried
99 F B -0.4274 Soluble
100 A B 0.0000 Buried
101 T B 0.0000 Buried
102 Y B 0.0000 Buried
103 Y B 0.0000 Buried
104 C B 0.0000 Buried
105 Q B 0.0000 Buried
106 Q B 0.0000 Buried
107 Y B 1.4776 Aggregation-prone
108 Y B 1.9502 Aggregation-prone
109 I B 1.8739 Aggregation-prone
114 Y B 1.1617 Aggregation-prone
115 P B 0.0000 Buried
116 Y B 0.6995 Aggregation-prone
117 T B -0.2768 Soluble
118 F B 0.0000 Buried
119 G B 0.0000 Buried
120 Q B -1.8059 Soluble
121 G B 0.0000 Buried
122 T B 0.0000 Buried
123 K B -1.2502 Soluble
124 V B 0.0000 Buried
125 E B -0.5141 Soluble
126 I B -0.1948 Soluble
127 K B -0.8113 Soluble
128 G B -1.2543 Soluble
129 Q B -1.5622 Soluble
130 P B -1.6820 Soluble
131 K B -2.3182 Soluble
132 A B -1.1956 Soluble
133 A B -0.6291 Soluble
134 P B 0.0000 Buried
135 S B -0.2647 Soluble
136 V B 0.0000 Buried
137 T B -0.3668 Soluble
138 L B -0.2818 Soluble
139 F B 0.0000 Buried
140 P B -0.0349 Soluble
141 P B 0.0000 Buried
142 S B -1.0015 Soluble
143 S B -1.5035 Soluble
144 E B -1.9119 Soluble
145 E B 0.0000 Buried
146 L B -1.9199 Soluble
147 Q B -2.1415 Soluble
148 A B -1.6406 Soluble
149 N B -2.3201 Soluble
150 K B -1.8647 Soluble
151 A B 0.0000 Buried
152 T B 0.0000 Buried
153 L B 0.0000 Buried
154 V B 0.0000 Buried
155 C B 0.0000 Buried
156 L B 0.0000 Buried
157 I B 0.0000 Buried
158 S B -0.0853 Soluble
159 D B 0.0000 Buried
160 F B 0.0085 Aggregation-prone
161 Y B 0.0000 Buried
162 P B -0.2702 Soluble
163 G B -0.5173 Soluble
164 A B -0.0876 Soluble
165 V B 0.0000 Buried
166 T B 0.2266 Aggregation-prone
167 V B 0.0000 Buried
168 A B -0.4053 Soluble
169 W B 0.0000 Buried
170 K B -0.9798 Soluble
171 A B -1.1681 Soluble
172 D B -1.7171 Soluble
173 S B -1.0168 Soluble
174 S B -0.7111 Soluble
175 P B -0.5283 Soluble
176 V B 0.0872 Aggregation-prone
177 K B -0.9471 Soluble
178 A B -0.2628 Soluble
179 G B 0.2651 Aggregation-prone
180 V B 1.3944 Aggregation-prone
181 E B 0.2665 Aggregation-prone
182 T B 0.0015 Aggregation-prone
183 T B 0.0000 Buried
184 T B -0.2942 Soluble
185 P B -0.7374 Soluble
186 S B -1.4331 Soluble
187 K B -2.1136 Soluble
188 N B -1.5496 Soluble
189 K B -0.9057 Soluble
190 Y B 0.0000 Buried
191 A B 0.0000 Buried
192 A B 0.0000 Buried
193 S B 0.0000 Buried
194 S B 0.1527 Aggregation-prone
195 Y B 0.0893 Aggregation-prone
196 L B 0.0000 Buried
197 S B -0.3775 Soluble
198 L B 0.0000 Buried
199 T B -1.5985 Soluble
200 P B -2.3026 Soluble
201 E B -3.0592 Soluble
202 Q B -2.4370 Soluble
203 W B 0.0000 Buried
204 K B -3.0519 Soluble
205 S B -2.3641 Soluble
206 H B -2.4816 Soluble
207 R B -2.6733 Soluble
208 S B 0.0000 Buried
209 Y B 0.0000 Buried
210 S B 0.0000 Buried
211 C B 0.0000 Buried
212 Q B -1.2633 Soluble
213 V B 0.0000 Buried
214 T B -0.6686 Soluble
215 H B -1.1971 Soluble
216 E B -2.4203 Soluble
217 G B -1.7020 Soluble
218 S B -1.0984 Soluble
219 T B -0.8462 Soluble
220 V B -0.9324 Soluble
221 E B -2.2429 Soluble
222 K B -1.6525 Soluble
223 T B -0.9388 Soluble
224 V B -0.3242 Soluble
225 A B -0.9101 Soluble
226 P B -0.9917 Soluble
227 T B -0.4950 Soluble

3D Structure — colored by A4D score

Sequence - click residue to focus in viewer  |  colored by A4D score
Load structure to view sequence…
Color Legend (B-factor = A4D Score)
Score > 1.5 — highly aggregation-prone
Score 0.5–1.5 — aggregation-prone
Score ≈ 0 — buried
Score −1 to −0.5 — soluble
Score < −2.5 — highly soluble
pH Structure
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A4D Score Threshold
Highlight residues > threshold in the sequence panel
CDR Regions
HCDR1
HCDR2
HCDR3
LCDR1
LCDR2
LCDR3
Display Options

pH-Dependent Aggregation Profiles

A4D scores calculated across 11 pH conditions (4.0–9.0, step 0.5). Click a row to view the structure at that pH. The input structure is globular — max score is recommended for pH analysis.

pH Avg A4D Score Max A4D Score Downloads
4.0 -0.6397 2.6716 CSV PDB
4.5 -0.6716 2.6369 CSV PDB
5.0 -0.7087 2.5941 CSV PDB
5.5 -0.7425 2.5477 CSV PDB
6.0 -0.7627 2.5001 CSV PDB
6.5 -0.7618 2.4521 CSV PDB
7.0 -0.7407 2.4041 CSV PDB
7.5 -0.7068 2.3564 CSV PDB
8.0 -0.6665 2.3097 CSV PDB
8.5 -0.6221 2.2657 CSV PDB
9.0 -0.5738 2.4006 CSV PDB
Average A4D Score vs pH
Max A4D Score vs pH