Umizortamig1 / 3g5v

A4DAB282_3g5v_B_A | Source PDB: 3g5v | Chains: B, A | Done
99.11
Yes
10 Å
Yes
Avg A4D Score
-0.6734
Max Score
0.9023
Min Score
-3.637
Total Score
-277.42
Score CDR
-0.6068
Score non-CDR
-0.6811

Calculation Parameters

Chain Sequence(s) DVQLQESGPSLVKPSQSLSLTCTVTGYSITSDFAWNWIRQFPGNKLEWMGYISYSGNTRYNPSLKSRISITRDTSSNQFFLQLNSVTIEDTATYYCVTAGRGFPYWGQGTLVTVSAAKTTPPSVYPLAPTLGCLVKGYFPESVTVTANSGSLSVHTFPALLQSDLYTMSSSVTVPSSTWSETVTCSVAHPASSTTVDKKADILMTQSPSSMSVSLGDTVSITCHSSQDINSNIGWLQQKPGKSFKGLIYHGTNLDDEVPSRFSGSGSGADYSLTISSLESEDFADYYCVQYAQFPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN input.pdb
Selected Chain(s) B (Heavy), A (Light)
Distance of Aggregation 10 Å
FoldX Energy Minimization Yes
pH Calculations Yes
Downloads Download all data (.tar.gz)

Aggrescan4D Profile

Aggregation-prone (score > 0)
Soluble (score < 0)
Buried (score = 0)

Per-Residue A4D Scores

Download CSV
Minimum Score -3.637
Maximum Score 0.9023
Average Score -0.6734
Total Score -277.4231

Residues with A4D score > 0.0 are highlighted as aggregation-prone.

Index Residue Chain A4D Score Classification
1 D B -2.2308 Soluble
2 V B 0.0000 Buried
3 Q B -1.5156 Soluble
4 L B 0.0000 Buried
5 Q B -1.2962 Soluble
6 E B 0.0000 Buried
7 S B -0.5240 Soluble
8 G B -0.5319 Soluble
9 P B -0.2999 Soluble
11 S B -0.1195 Soluble
12 L B -0.3133 Soluble
13 V B 0.0000 Buried
14 K B -1.4790 Soluble
15 P B -0.9227 Soluble
16 S B -0.9732 Soluble
17 Q B -1.6203 Soluble
18 S B -1.2594 Soluble
19 L B 0.0000 Buried
20 S B -0.7089 Soluble
21 L B 0.0000 Buried
22 T B -0.4858 Soluble
23 C B 0.0000 Buried
24 T B -0.6265 Soluble
25 V B 0.0000 Buried
26 T B -0.8602 Soluble
27 G B -0.9633 Soluble
28 Y B -0.5527 Soluble
29 S B -0.2387 Soluble
30 I B 0.0000 Buried
31 T B -0.1506 Soluble
35 S B -0.3908 Soluble
36 D B -0.7020 Soluble
37 F B -0.1495 Soluble
38 A B -0.2533 Soluble
39 W B 0.0000 Buried
40 N B 0.0000 Buried
41 W B 0.0000 Buried
42 I B 0.0000 Buried
43 R B 0.0000 Buried
44 Q B 0.0000 Buried
45 F B -1.0535 Soluble
46 P B -1.0347 Soluble
47 G B -1.3924 Soluble
48 N B -1.8738 Soluble
49 K B -2.2802 Soluble
50 L B 0.0000 Buried
51 E B -0.6195 Soluble
52 W B 0.0000 Buried
53 M B 0.0000 Buried
54 G B 0.0000 Buried
55 Y B -0.3227 Soluble
56 I B 0.0000 Buried
57 S B -0.5315 Soluble
58 Y B 0.0946 Aggregation-prone
59 S B -0.3964 Soluble
63 G B -0.8621 Soluble
64 N B -1.5539 Soluble
65 T B -1.2162 Soluble
66 R B -1.6981 Soluble
67 Y B -0.9561 Soluble
68 N B 0.0000 Buried
69 P B -1.1509 Soluble
70 S B -0.7845 Soluble
71 L B 0.0000 Buried
72 K B -2.1447 Soluble
74 S B -1.3056 Soluble
75 R B -1.3016 Soluble
76 I B 0.0000 Buried
77 S B -0.8873 Soluble
78 I B 0.0000 Buried
79 T B -0.6426 Soluble
80 R B -0.8432 Soluble
81 D B -1.1051 Soluble
82 T B -0.7482 Soluble
83 S B -0.6844 Soluble
84 S B -0.7234 Soluble
85 N B -0.7898 Soluble
86 Q B -0.8324 Soluble
87 F B 0.0000 Buried
88 F B -0.2005 Soluble
89 L B 0.0000 Buried
90 Q B -0.8795 Soluble
91 L B 0.0000 Buried
92 N B -1.1571 Soluble
93 S B -1.0305 Soluble
94 V B 0.0000 Buried
95 T B -0.4177 Soluble
96 I B 0.4228 Aggregation-prone
97 E B -1.0904 Soluble
98 D B 0.0000 Buried
99 T B -0.0217 Soluble
100 A B 0.0000 Buried
101 T B 0.0000 Buried
102 Y B 0.0000 Buried
103 Y B 0.0000 Buried
104 C B 0.0000 Buried
105 V B 0.0000 Buried
106 T B 0.0000 Buried
107 A B -0.2258 Soluble
108 G B -0.6140 Soluble
109 R B -0.8612 Soluble
114 G B 0.0000 Buried
115 F B 0.0000 Buried
116 P B 0.0000 Buried
117 Y B -0.7137 Soluble
118 W B -0.6776 Soluble
119 G B 0.0000 Buried
120 Q B -1.7315 Soluble
121 G B 0.0000 Buried
122 T B -0.2680 Soluble
123 L B 0.3188 Aggregation-prone
124 V B 0.0000 Buried
125 T B 0.0000 Buried
126 V B 0.0000 Buried
127 S B -0.4230 Soluble
128 A B -0.5554 Soluble
129 A B -1.2775 Soluble
130 K B -1.9943 Soluble
131 T B -0.9315 Soluble
132 T B -0.5692 Soluble
133 P B -0.2832 Soluble
134 P B 0.0000 Buried
135 S B -0.5388 Soluble
136 V B 0.0000 Buried
137 Y B 0.0000 Buried
138 P B -0.7220 Soluble
139 L B 0.0000 Buried
140 A B -0.0259 Soluble
141 P B -0.1477 Soluble
142 T B 0.1317 Aggregation-prone
143 L B 0.0000 Buried
144 G B 0.0246 Aggregation-prone
145 C B -0.2119 Soluble
146 L B 0.0000 Buried
147 V B 0.0000 Buried
148 K B 0.0000 Buried
149 G B -0.1902 Soluble
150 Y B 0.0000 Buried
151 F B 0.0000 Buried
152 P B 0.0000 Buried
153 E B -0.3247 Soluble
154 S B -0.2409 Soluble
155 V B 0.0913 Aggregation-prone
156 T B 0.1489 Aggregation-prone
157 V B 0.1933 Aggregation-prone
158 T B -0.1000 Soluble
159 A B -0.1461 Soluble
160 N B -0.5839 Soluble
161 S B -0.6156 Soluble
162 G B -0.6908 Soluble
163 S B -0.4853 Soluble
164 L B 0.1502 Aggregation-prone
165 S B -0.1163 Soluble
166 V B 0.9023 Aggregation-prone
167 H B 0.0332 Aggregation-prone
168 T B -0.0876 Soluble
169 F B 0.0000 Buried
170 P B -0.3968 Soluble
171 A B 0.3105 Aggregation-prone
172 L B 0.6169 Aggregation-prone
173 L B 0.8254 Aggregation-prone
174 Q B -0.0916 Soluble
175 S B -0.7719 Soluble
176 D B -1.5721 Soluble
177 L B -0.4811 Soluble
178 Y B 0.2262 Aggregation-prone
179 T B 0.0000 Buried
180 M B 0.0000 Buried
181 S B 0.0000 Buried
182 S B 0.0000 Buried
183 S B 0.0000 Buried
184 V B 0.0000 Buried
185 T B 0.2687 Aggregation-prone
186 V B 0.0673 Aggregation-prone
187 P B -0.2406 Soluble
188 S B -0.5005 Soluble
189 S B -0.6547 Soluble
190 T B -0.7968 Soluble
191 W B -0.1900 Soluble
192 S B -1.0072 Soluble
193 E B -1.8254 Soluble
194 T B -1.0874 Soluble
195 V B 0.0000 Buried
196 T B -0.9875 Soluble
197 C B 0.0000 Buried
198 S B -0.9766 Soluble
199 V B 0.0000 Buried
200 A B -0.1874 Soluble
201 H B 0.0000 Buried
202 P B -0.4047 Soluble
203 A B -0.2921 Soluble
204 S B -0.2353 Soluble
205 S B -0.3148 Soluble
206 T B -0.3872 Soluble
207 T B -0.5165 Soluble
208 V B -0.8188 Soluble
209 D B -2.2048 Soluble
210 K B -2.0978 Soluble
211 K B -2.2785 Soluble
212 A B -0.8536 Soluble
1 D A -1.6173 Soluble
2 I A 0.0000 Buried
3 L A 0.6717 Aggregation-prone
4 M A 0.0000 Buried
5 T A -0.3540 Soluble
6 Q A -0.4151 Soluble
7 S A -0.5633 Soluble
8 P A -0.5398 Soluble
9 S A -0.7061 Soluble
10 S A -0.6697 Soluble
11 M A -0.5225 Soluble
12 S A -0.8022 Soluble
13 V A -0.5156 Soluble
14 S A -0.6363 Soluble
15 L A -0.0813 Soluble
16 G A -0.7081 Soluble
17 D A -0.7957 Soluble
18 T A -0.5350 Soluble
19 V A 0.0000 Buried
20 S A -0.3074 Soluble
21 I A 0.0000 Buried
22 T A -0.7951 Soluble
23 C A 0.0000 Buried
24 H A -1.6739 Soluble
25 S A 0.0000 Buried
26 S A -1.2210 Soluble
27 Q A -2.4916 Soluble
28 D A -3.0998 Soluble
29 I A 0.0000 Buried
36 N A -2.4365 Soluble
37 S A -1.7414 Soluble
38 N A -1.3177 Soluble
39 I A 0.0000 Buried
40 G A 0.0000 Buried
41 W A 0.0000 Buried
42 L A 0.0000 Buried
43 Q A 0.0000 Buried
44 Q A 0.0000 Buried
45 K A -1.7694 Soluble
46 P A -1.6914 Soluble
47 G A -1.3997 Soluble
48 K A -1.7301 Soluble
49 S A -1.5809 Soluble
50 F A 0.0000 Buried
51 K A -1.1554 Soluble
52 G A 0.0000 Buried
53 L A 0.0000 Buried
54 I A 0.0000 Buried
55 Y A -0.5491 Soluble
56 H A -1.2469 Soluble
57 G A 0.0000 Buried
65 T A -0.6966 Soluble
66 N A -0.9470 Soluble
67 L A -0.6683 Soluble
68 D A 0.0000 Buried
69 D A -2.8620 Soluble
70 E A -2.5529 Soluble
71 V A -1.4739 Soluble
72 P A -0.8964 Soluble
74 S A -0.5982 Soluble
75 R A -0.8078 Soluble
76 F A 0.0000 Buried
77 S A -0.4392 Soluble
78 G A 0.0000 Buried
79 S A -0.9849 Soluble
80 G A -1.5710 Soluble
83 S A -1.8000 Soluble
84 G A -2.2934 Soluble
85 A A -2.5764 Soluble
86 D A -2.8758 Soluble
87 Y A 0.0000 Buried
88 S A -0.8711 Soluble
89 L A 0.0000 Buried
90 T A -0.3497 Soluble
91 I A 0.0000 Buried
92 S A -0.7746 Soluble
93 S A -0.8985 Soluble
94 L A 0.0000 Buried
95 E A -1.9120 Soluble
96 S A -1.7131 Soluble
97 E A -2.4561 Soluble
98 D A 0.0000 Buried
99 F A 0.0000 Buried
100 A A 0.0000 Buried
101 D A -1.0678 Soluble
102 Y A 0.0000 Buried
103 Y A 0.0000 Buried
104 C A 0.0000 Buried
105 V A 0.0000 Buried
106 Q A 0.0000 Buried
107 Y A -0.3063 Soluble
108 A A -1.0600 Soluble
109 Q A -0.9621 Soluble
114 F A -0.4047 Soluble
115 P A 0.0000 Buried
116 W A 0.0000 Buried
117 T A -0.0470 Soluble
118 F A 0.0113 Aggregation-prone
119 G A 0.0000 Buried
120 G A -0.9885 Soluble
121 G A -1.0311 Soluble
122 T A 0.0000 Buried
123 K A -1.0523 Soluble
124 L A 0.0000 Buried
125 E A -1.1211 Soluble
126 I A -0.8914 Soluble
127 K A -1.8907 Soluble
128 R A -1.9380 Soluble
129 A A -1.4030 Soluble
130 D A -2.4446 Soluble
131 A A -1.3933 Soluble
132 A A -0.6700 Soluble
133 P A 0.0000 Buried
134 T A -0.1544 Soluble
135 V A 0.1209 Aggregation-prone
136 S A 0.0047 Aggregation-prone
137 I A 0.0653 Aggregation-prone
138 F A 0.0000 Buried
139 P A -0.3295 Soluble
140 P A -0.3883 Soluble
141 S A 0.0000 Buried
142 S A -0.8030 Soluble
143 E A -1.4064 Soluble
144 Q A 0.0000 Buried
145 L A -1.0195 Soluble
146 T A -0.7294 Soluble
147 S A -0.7636 Soluble
148 G A -1.1174 Soluble
149 G A -1.0295 Soluble
150 A A 0.0000 Buried
151 S A 0.0000 Buried
152 V A 0.0000 Buried
153 V A 0.0000 Buried
154 C A 0.0000 Buried
155 F A 0.0000 Buried
156 L A 0.0000 Buried
157 N A 0.0000 Buried
158 N A -1.1636 Soluble
159 F A 0.0000 Buried
160 Y A 0.0000 Buried
161 P A -2.2280 Soluble
162 K A -2.5909 Soluble
163 D A -2.8172 Soluble
164 I A -1.8203 Soluble
165 N A -2.0175 Soluble
166 V A -0.7999 Soluble
167 K A -1.4992 Soluble
168 W A 0.0000 Buried
169 K A -2.0934 Soluble
170 I A 0.0000 Buried
171 D A -2.4346 Soluble
172 G A -1.8343 Soluble
173 S A -1.9909 Soluble
174 E A -3.0716 Soluble
175 R A -2.5369 Soluble
176 Q A -2.5419 Soluble
177 N A -2.1656 Soluble
178 G A -1.0246 Soluble
179 V A -0.6101 Soluble
180 L A -0.0326 Soluble
181 N A -0.3527 Soluble
182 S A 0.0000 Buried
183 W A -0.4410 Soluble
184 T A -1.0823 Soluble
185 D A -2.1428 Soluble
186 Q A -1.9402 Soluble
187 D A -2.0144 Soluble
188 S A -2.1620 Soluble
189 K A -2.8270 Soluble
190 D A -2.9255 Soluble
191 S A -2.2653 Soluble
192 T A 0.0000 Buried
193 Y A 0.0000 Buried
194 S A 0.0000 Buried
195 M A 0.0000 Buried
196 S A 0.0000 Buried
197 S A 0.0000 Buried
198 T A 0.0000 Buried
199 L A 0.0000 Buried
200 T A -0.3005 Soluble
201 L A 0.0000 Buried
202 T A -1.4295 Soluble
203 K A -2.4626 Soluble
204 D A -3.2813 Soluble
205 E A -2.5840 Soluble
206 Y A 0.0000 Buried
207 E A -3.5201 Soluble
208 R A -3.6370 Soluble
209 H A -3.0748 Soluble
210 N A -3.2327 Soluble
211 S A -2.1174 Soluble
212 Y A 0.0000 Buried
213 T A -1.0249 Soluble
214 C A 0.0000 Buried
215 E A -0.4687 Soluble
216 A A 0.0000 Buried
217 T A -1.0475 Soluble
218 H A 0.0000 Buried
219 K A -2.4495 Soluble
220 T A -1.3212 Soluble
221 S A -0.5969 Soluble
222 T A -0.5107 Soluble
223 S A -0.3257 Soluble
224 P A -0.3916 Soluble
225 I A 0.4626 Aggregation-prone
226 V A 0.4421 Aggregation-prone
227 K A -0.4064 Soluble
228 S A -0.6089 Soluble
229 F A -1.1973 Soluble
230 N A -2.5313 Soluble
231 R A -2.5146 Soluble
232 N A -2.2403 Soluble

3D Structure — colored by A4D score

Sequence - click residue to focus in viewer  |  colored by A4D score
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Color Legend (B-factor = A4D Score)
Score > 1.5 — highly aggregation-prone
Score 0.5–1.5 — aggregation-prone
Score ≈ 0 — buried
Score −1 to −0.5 — soluble
Score < −2.5 — highly soluble
pH Structure
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A4D Score Threshold
Highlight residues > threshold in the sequence panel
CDR Regions
HCDR1
HCDR2
HCDR3
LCDR1
LCDR2
LCDR3
Display Options

pH-Dependent Aggregation Profiles

A4D scores calculated across 11 pH conditions (4.0–9.0, step 0.5). Click a row to view the structure at that pH. The input structure is globular — max score is recommended for pH analysis.

pH Avg A4D Score Max A4D Score Downloads
4.0 -0.5743 2.3354 CSV PDB
4.5 -0.6257 2.3354 CSV PDB
5.0 -0.6849 2.3354 CSV PDB
5.5 -0.7422 2.3354 CSV PDB
6.0 -0.788 2.3354 CSV PDB
6.5 -0.8168 2.3354 CSV PDB
7.0 -0.8302 2.3354 CSV PDB
7.5 -0.8333 2.3354 CSV PDB
8.0 -0.8293 2.3354 CSV PDB
8.5 -0.8178 2.3354 CSV PDB
9.0 -0.7966 2.3354 CSV PDB
Average A4D Score vs pH
Max A4D Score vs pH