Zemocimig / 8gv1

A4DAB305_8gv1_A_B | Source PDB: 8gv1 | Chains: A, B | Done
100
Yes
10 Å
Yes
Avg A4D Score
-0.6917
Max Score
1.3176
Min Score
-3.3895
Total Score
-294.68
Score CDR
-0.584
Score non-CDR
-0.7051

Calculation Parameters

Chain Sequence(s) QVQLVQSGSELKKPGASVKVSCKASGYTFTQNNMDWVRQAPGQGLEWMGDINTRSGGVIYNEEFQDRLIMTVDKSTDTAYMELSSLRSEDTATYHCARRKSYGYYLDVWGEGTLVTVSSASTKGPSVFPLAPCSSTAALGCLVEDYFPEPVTVSWNSGALTSGVHTFPAVLESSGLYSLSSVVTVPSSSLGTQTYTCNVDHKPSNTKVDKRVESSYVLTQPVSVSVALGQTATITCEGEQIGSKEVHWYHQRPGQAPILVMFRDARRPSGIPERLSGSNSGNTASLTISGAEAGDEGDYYCQVWDSSSYTVFGGGTKVTVVGQPKAAPSVTLFPPSSEELQANKAKLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLKLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC input.pdb
Selected Chain(s) A (Heavy), B (Light)
Distance of Aggregation 10 Å
FoldX Energy Minimization Yes
pH Calculations Yes
Downloads Download all data (.tar.gz)

Aggrescan4D Profile

Aggregation-prone (score > 0)
Soluble (score < 0)
Buried (score = 0)

Per-Residue A4D Scores

Download CSV
Minimum Score -3.3895
Maximum Score 1.3176
Average Score -0.6917
Total Score -294.6844

Residues with A4D score > 0.0 are highlighted as aggregation-prone.

Index Residue Chain A4D Score Classification
1 Q A -1.3439 Soluble
2 V A -0.4621 Soluble
3 Q A -0.9529 Soluble
4 L A 0.0000 Buried
5 V A 0.6444 Aggregation-prone
6 Q A -0.1944 Soluble
7 S A -0.7128 Soluble
8 G A -0.8487 Soluble
9 S A 0.0000 Buried
11 E A -1.7318 Soluble
12 L A -1.1410 Soluble
13 K A -1.8269 Soluble
14 K A -2.5040 Soluble
15 P A -2.2494 Soluble
16 G A -1.6050 Soluble
17 A A -1.2465 Soluble
18 S A -1.2494 Soluble
19 V A 0.0000 Buried
20 K A -1.6594 Soluble
21 V A 0.0000 Buried
22 S A -0.4993 Soluble
23 C A 0.0000 Buried
24 K A -1.1467 Soluble
25 A A 0.0000 Buried
26 S A -0.8133 Soluble
27 G A -0.8569 Soluble
28 Y A -0.5169 Soluble
29 T A -0.4781 Soluble
30 F A 0.0000 Buried
35 T A -1.7106 Soluble
36 Q A -1.4459 Soluble
37 N A 0.0000 Buried
38 N A -0.9343 Soluble
39 M A 0.0000 Buried
40 D A 0.0000 Buried
41 W A 0.0000 Buried
42 V A 0.0000 Buried
43 R A -0.6104 Soluble
44 Q A -0.8738 Soluble
45 A A -1.1394 Soluble
46 P A -0.9082 Soluble
47 G A -1.2217 Soluble
48 Q A -1.7798 Soluble
49 G A -1.2726 Soluble
50 L A 0.0000 Buried
51 E A -0.8471 Soluble
52 W A 0.0000 Buried
53 M A 0.0000 Buried
54 G A 0.0000 Buried
55 D A 0.0000 Buried
56 I A 0.0000 Buried
57 N A -1.3372 Soluble
58 T A 0.0000 Buried
59 R A -2.7741 Soluble
62 S A -1.5533 Soluble
63 G A -1.3206 Soluble
64 G A -0.5562 Soluble
65 V A 0.5898 Aggregation-prone
66 I A 0.5598 Aggregation-prone
67 Y A -0.6040 Soluble
68 N A -1.5677 Soluble
69 E A -3.3382 Soluble
70 E A -3.3895 Soluble
71 F A 0.0000 Buried
72 Q A -2.7162 Soluble
74 D A -2.7670 Soluble
75 R A 0.0000 Buried
76 L A 0.0000 Buried
77 I A 0.9647 Aggregation-prone
78 M A 0.0000 Buried
79 T A 0.0489 Aggregation-prone
80 V A -1.2796 Soluble
81 D A -1.9955 Soluble
82 K A -2.6274 Soluble
83 S A -1.4137 Soluble
84 T A -1.4465 Soluble
85 D A -1.9412 Soluble
86 T A 0.0000 Buried
87 A A 0.0000 Buried
88 Y A -0.2745 Soluble
89 M A 0.0000 Buried
90 E A -0.6126 Soluble
91 L A 0.0000 Buried
92 S A -0.8467 Soluble
93 S A -1.2618 Soluble
94 L A 0.0000 Buried
95 R A -2.8283 Soluble
96 S A -2.2838 Soluble
97 E A -2.4623 Soluble
98 D A 0.0000 Buried
99 T A -1.0198 Soluble
100 A A 0.0000 Buried
101 T A -0.3356 Soluble
102 Y A 0.0000 Buried
103 H A 0.0000 Buried
104 C A 0.0000 Buried
105 A A 0.0000 Buried
106 R A -0.3439 Soluble
107 R A 0.0000 Buried
108 K A -0.3919 Soluble
109 S A -0.0297 Soluble
110 Y A 1.0495 Aggregation-prone
112 G A 0.4328 Aggregation-prone
113 Y A 0.3871 Aggregation-prone
114 Y A 0.0000 Buried
115 L A 0.0000 Buried
116 D A -0.0868 Soluble
117 V A 0.1031 Aggregation-prone
118 W A 0.1006 Aggregation-prone
119 G A 0.0000 Buried
120 E A -1.8402 Soluble
121 G A -0.9411 Soluble
122 T A 0.0000 Buried
123 L A -0.4310 Soluble
124 V A 0.0000 Buried
125 T A 0.0000 Buried
126 V A 0.0000 Buried
127 S A -1.4597 Soluble
128 S A -1.0372 Soluble
129 A A -0.5942 Soluble
130 S A -0.6864 Soluble
131 T A -0.7877 Soluble
132 K A -1.0011 Soluble
133 G A -1.2041 Soluble
134 P A 0.0000 Buried
135 S A -0.3668 Soluble
136 V A 0.0000 Buried
137 F A 0.0000 Buried
138 P A -0.7732 Soluble
139 L A 0.0000 Buried
140 A A -0.0816 Soluble
141 P A -0.1678 Soluble
142 C A -0.0649 Soluble
143 S A -0.4266 Soluble
144 S A -0.3657 Soluble
145 T A -0.3482 Soluble
146 A A -0.1896 Soluble
147 A A -0.1103 Soluble
148 L A 0.0000 Buried
149 G A 0.0000 Buried
150 C A 0.0000 Buried
151 L A 0.0000 Buried
152 V A 0.0000 Buried
153 E A 0.0000 Buried
154 D A -0.3078 Soluble
155 Y A 0.0000 Buried
156 F A -0.0904 Soluble
157 P A 0.0000 Buried
158 E A -0.4472 Soluble
159 P A -0.6592 Soluble
160 V A -0.5265 Soluble
161 T A -0.4974 Soluble
162 V A -0.1847 Soluble
163 S A -0.4782 Soluble
164 W A 0.0000 Buried
165 N A -1.0574 Soluble
166 S A -0.7683 Soluble
167 G A -0.5881 Soluble
168 A A -0.2647 Soluble
169 L A -0.1017 Soluble
170 T A -0.1938 Soluble
171 S A -0.2173 Soluble
172 G A -0.2509 Soluble
173 V A 0.1493 Aggregation-prone
174 H A -0.1337 Soluble
175 T A -0.0275 Soluble
176 F A 0.0000 Buried
177 P A -0.0731 Soluble
178 A A 0.2736 Aggregation-prone
179 V A 0.0000 Buried
180 L A 1.0342 Aggregation-prone
181 E A 0.1792 Aggregation-prone
182 S A -0.2093 Soluble
183 S A -0.2561 Soluble
184 G A -0.0575 Soluble
185 L A 0.1541 Aggregation-prone
186 Y A 0.4320 Aggregation-prone
187 S A 0.0000 Buried
188 L A 0.0000 Buried
189 S A 0.0000 Buried
190 S A 0.0000 Buried
191 V A 0.0000 Buried
192 V A 0.0000 Buried
193 T A -0.1954 Soluble
194 V A 0.0000 Buried
195 P A -0.4383 Soluble
196 S A -0.3715 Soluble
197 S A -0.4246 Soluble
198 S A -0.3794 Soluble
199 L A -0.1612 Soluble
200 G A -0.6918 Soluble
201 T A -0.6954 Soluble
202 Q A -1.1240 Soluble
203 T A -1.0761 Soluble
204 Y A 0.0000 Buried
205 T A -1.6795 Soluble
206 C A 0.0000 Buried
207 N A -1.6479 Soluble
208 V A 0.0000 Buried
209 D A -1.7898 Soluble
210 H A 0.0000 Buried
211 K A -2.6665 Soluble
212 P A -1.7539 Soluble
213 S A -1.7800 Soluble
214 N A -2.5811 Soluble
215 T A -1.9735 Soluble
216 K A -2.6208 Soluble
217 V A -1.7398 Soluble
218 D A -2.7451 Soluble
219 K A -2.1940 Soluble
220 R A -2.6113 Soluble
221 V A -1.3671 Soluble
222 E A -1.2636 Soluble
223 S A -1.0261 Soluble
1 S B 0.3216 Aggregation-prone
2 Y B 0.6642 Aggregation-prone
3 V B 1.3176 Aggregation-prone
4 L B 0.0000 Buried
5 T B -0.1903 Soluble
6 Q B -0.3554 Soluble
7 P B 0.2230 Aggregation-prone
8 V B 1.0523 Aggregation-prone
9 S B -0.0663 Soluble
11 V B -0.1586 Soluble
12 S B -0.4396 Soluble
13 V B 0.0000 Buried
14 A B -0.4974 Soluble
15 L B -0.7273 Soluble
16 G B -1.3258 Soluble
17 Q B -1.5408 Soluble
18 T B -0.8210 Soluble
19 A B -0.3392 Soluble
20 T B -0.1130 Soluble
21 I B 0.0000 Buried
22 T B -0.4637 Soluble
23 C B 0.0000 Buried
24 E B -1.9813 Soluble
25 G B 0.0000 Buried
26 E B -2.8801 Soluble
27 Q B -3.0855 Soluble
28 I B 0.0000 Buried
29 G B -2.1549 Soluble
36 S B -1.5026 Soluble
37 K B -1.5927 Soluble
38 E B -1.5846 Soluble
39 V B 0.0000 Buried
40 H B 0.0000 Buried
41 W B 0.0000 Buried
42 Y B 0.0000 Buried
43 H B 0.0000 Buried
44 Q B 0.0000 Buried
45 R B -2.2009 Soluble
46 P B -1.7060 Soluble
47 G B -1.7241 Soluble
48 Q B -2.0879 Soluble
49 A B -1.1826 Soluble
50 P B 0.0000 Buried
51 I B 0.9352 Aggregation-prone
52 L B 0.0000 Buried
53 V B 0.0000 Buried
54 M B 0.0000 Buried
55 F B -1.4844 Soluble
56 R B -2.3847 Soluble
57 D B -2.0015 Soluble
65 A B -1.7519 Soluble
66 R B -2.6599 Soluble
67 R B -2.3279 Soluble
68 P B -0.9076 Soluble
69 S B -0.7775 Soluble
70 G B -0.8414 Soluble
71 I B -1.0410 Soluble
72 P B -1.3954 Soluble
74 E B -2.5309 Soluble
75 R B -1.5595 Soluble
76 L B 0.0000 Buried
77 S B -1.2761 Soluble
78 G B -0.9842 Soluble
79 S B -0.9912 Soluble
80 N B -1.5096 Soluble
83 S B -1.4193 Soluble
84 G B -2.1703 Soluble
85 N B -3.0061 Soluble
86 T B -1.9175 Soluble
87 A B 0.0000 Buried
88 S B -0.4912 Soluble
89 L B 0.0000 Buried
90 T B -0.2984 Soluble
91 I B 0.0000 Buried
92 S B -1.3300 Soluble
93 G B -1.5768 Soluble
94 A B 0.0000 Buried
95 E B -2.0136 Soluble
96 A B 0.0000 Buried
97 G B -1.2030 Soluble
98 D B -1.1637 Soluble
99 E B -1.3493 Soluble
100 G B 0.0000 Buried
101 D B -1.6109 Soluble
102 Y B 0.0000 Buried
103 Y B 0.0000 Buried
104 C B 0.0000 Buried
105 Q B 0.0000 Buried
106 V B 0.0000 Buried
107 W B 0.1549 Aggregation-prone
108 D B -0.2049 Soluble
109 S B -0.2678 Soluble
113 S B -0.2770 Soluble
114 S B -0.0490 Soluble
115 Y B 0.4415 Aggregation-prone
116 T B 0.0000 Buried
117 V B 0.5866 Aggregation-prone
118 F B 0.3512 Aggregation-prone
119 G B 0.0000 Buried
120 G B -0.5179 Soluble
121 G B -0.7114 Soluble
122 T B 0.0000 Buried
123 K B -1.7842 Soluble
124 V B 0.0000 Buried
125 T B -0.4709 Soluble
126 V B 0.0000 Buried
127 V B 0.0724 Aggregation-prone
128 G B -0.5487 Soluble
129 Q B -0.9376 Soluble
130 P B -1.0938 Soluble
131 K B -2.3075 Soluble
132 A B -1.3822 Soluble
133 A B -0.8984 Soluble
134 P B -0.5155 Soluble
135 S B -0.3494 Soluble
136 V B 0.0000 Buried
137 T B -0.5062 Soluble
138 L B 0.0000 Buried
139 F B 0.0000 Buried
140 P B 0.0000 Buried
141 P B 0.0000 Buried
142 S B 0.0000 Buried
143 S B -0.8441 Soluble
144 E B -1.8155 Soluble
145 E B 0.0000 Buried
146 L B -1.2014 Soluble
147 Q B -1.9359 Soluble
148 A B -1.4626 Soluble
149 N B -2.1419 Soluble
150 K B -1.9478 Soluble
151 A B 0.0000 Buried
152 K B 0.0000 Buried
153 L B 0.0000 Buried
154 V B 0.0000 Buried
155 C B 0.0000 Buried
156 L B 0.0000 Buried
157 I B 0.0000 Buried
158 S B -0.6409 Soluble
159 D B -1.4548 Soluble
160 F B 0.0000 Buried
161 Y B -1.1182 Soluble
162 P B -0.9107 Soluble
163 G B -0.5771 Soluble
164 A B -0.1926 Soluble
165 V B -0.0834 Soluble
166 T B -0.0505 Soluble
167 V B 0.1751 Aggregation-prone
168 A B -0.3357 Soluble
169 W B 0.0000 Buried
170 K B -1.0129 Soluble
171 A B -0.9543 Soluble
172 D B -1.1885 Soluble
173 S B -0.6264 Soluble
174 S B -0.7635 Soluble
175 P B -0.8529 Soluble
176 V B -0.8236 Soluble
177 K B -1.5866 Soluble
178 A B -0.8524 Soluble
179 G B -0.6768 Soluble
180 V B -0.2142 Soluble
181 E B -0.2648 Soluble
182 T B 0.0190 Aggregation-prone
183 T B 0.0000 Buried
184 T B -0.1623 Soluble
185 P B -0.2143 Soluble
186 S B -0.4083 Soluble
187 K B -1.1035 Soluble
188 Q B -1.3057 Soluble
189 S B -1.3456 Soluble
190 N B -1.4446 Soluble
191 N B -1.3665 Soluble
192 K B -1.6770 Soluble
193 Y B -0.7643 Soluble
194 A B 0.0000 Buried
195 A B 0.0000 Buried
196 S B 0.0000 Buried
197 S B 0.0000 Buried
198 Y B 0.0000 Buried
199 L B 0.0000 Buried
200 K B -1.2274 Soluble
201 L B -1.2504 Soluble
202 T B -1.7865 Soluble
203 P B -2.3091 Soluble
204 E B -3.1586 Soluble
205 Q B -2.6662 Soluble
206 W B 0.0000 Buried
207 K B -3.1606 Soluble
208 S B -2.4767 Soluble
209 H B -2.3968 Soluble
210 R B -2.6452 Soluble
211 S B -1.6400 Soluble
212 Y B 0.0000 Buried
213 S B -1.0544 Soluble
214 C B 0.0000 Buried
215 Q B -1.0420 Soluble
216 V B 0.0000 Buried
217 T B -0.6512 Soluble
218 H B 0.0000 Buried
219 E B -2.3026 Soluble
220 G B -1.4410 Soluble
221 S B -0.8523 Soluble
222 T B -0.6573 Soluble
223 V B -0.5922 Soluble
224 E B -2.0787 Soluble
225 K B -1.6904 Soluble
226 T B -0.9609 Soluble
227 V B -0.5297 Soluble
228 A B -1.1805 Soluble
229 P B 0.0000 Buried
230 T B -1.3075 Soluble
231 E B -1.6389 Soluble
232 C B -0.1094 Soluble

3D Structure — colored by A4D score

Sequence - click residue to focus in viewer  |  colored by A4D score
Load structure to view sequence…
Color Legend (B-factor = A4D Score)
Score > 1.5 — highly aggregation-prone
Score 0.5–1.5 — aggregation-prone
Score ≈ 0 — buried
Score −1 to −0.5 — soluble
Score < −2.5 — highly soluble
pH Structure
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A4D Score Threshold
Highlight residues > threshold in the sequence panel
CDR Regions
HCDR1
HCDR2
HCDR3
LCDR1
LCDR2
LCDR3
Display Options

pH-Dependent Aggregation Profiles

A4D scores calculated across 11 pH conditions (4.0–9.0, step 0.5). Click a row to view the structure at that pH. The input structure is globular — max score is recommended for pH analysis.

pH Avg A4D Score Max A4D Score Downloads
4.0 -0.6783 1.9365 CSV PDB
4.5 -0.7199 1.9085 CSV PDB
5.0 -0.773 1.8649 CSV PDB
5.5 -0.8267 1.8126 CSV PDB
6.0 -0.8686 1.7599 CSV PDB
6.5 -0.8878 1.7151 CSV PDB
7.0 -0.8816 1.6855 CSV PDB
7.5 -0.8575 1.6711 CSV PDB
8.0 -0.8241 1.6656 CSV PDB
8.5 -0.7855 1.6637 CSV PDB
9.0 -0.7433 1.6631 CSV PDB
Average A4D Score vs pH
Max A4D Score vs pH