Navenibart / 8fgx

A4DAB175_8fgx_B_A | Source PDB: 8fgx | Chains: B, A | Done
100
Yes
10 Å
Yes
Avg A4D Score
-0.7529
Max Score
1.3396
Min Score
-3.9309
Total Score
-322.99
Score CDR
-0.4671
Score non-CDR
-0.7889

Calculation Parameters

Chain Sequence(s) QVQLVQSGAEVKKPGSSVKVSCKASGYAFSSYWMNWVRQAPGQGLEWIGQIYPGDDDTNYNAKFQGRVTITVDKSTTTAYMELSSLRSEDTAVYFCAGSLMVTTGAPFDYWGQGTTVTVSSASTKGPSVFPLAPSSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPDIQMTQSPSSLSASVGDRVTITCKASQDVGIAVAWYQQKPGKAPKFLIYYASHRGWGVPDRFSGSGSGTDFTLTISSLQPEDFATYFCQQYRSYPLTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE input.pdb
Selected Chain(s) B (Heavy), A (Light)
Distance of Aggregation 10 Å
FoldX Energy Minimization Yes
pH Calculations Yes
Downloads Download all data (.tar.gz)

Aggrescan4D Profile

Aggregation-prone (score > 0)
Soluble (score < 0)
Buried (score = 0)

Per-Residue A4D Scores

Download CSV
Minimum Score -3.9309
Maximum Score 1.3396
Average Score -0.7529
Total Score -322.9942

Residues with A4D score > 0.0 are highlighted as aggregation-prone.

Index Residue Chain A4D Score Classification
1 Q B -0.9744 Soluble
2 V B 0.1712 Aggregation-prone
3 Q B -0.3996 Soluble
4 L B 0.0000 Buried
5 V B 0.1213 Aggregation-prone
6 Q B 0.0000 Buried
7 S B -0.7391 Soluble
8 G B -0.6169 Soluble
9 A B -0.4144 Soluble
11 E B -0.8350 Soluble
12 V B -0.2261 Soluble
13 K B -1.4289 Soluble
14 K B -2.3960 Soluble
15 P B -2.3386 Soluble
16 G B -1.6662 Soluble
17 S B -1.2987 Soluble
18 S B -1.4438 Soluble
19 V B 0.0000 Buried
20 K B -2.0625 Soluble
21 V B 0.0000 Buried
22 S B -0.5839 Soluble
23 C B 0.0000 Buried
24 K B -0.7004 Soluble
25 A B 0.0000 Buried
26 S B -0.3779 Soluble
27 G B -0.4521 Soluble
28 Y B 0.1042 Aggregation-prone
29 A B 0.3210 Aggregation-prone
30 F B 0.0000 Buried
35 S B -0.8242 Soluble
36 S B 0.2244 Aggregation-prone
37 Y B 0.8285 Aggregation-prone
38 W B 0.1640 Aggregation-prone
39 M B 0.0000 Buried
40 N B 0.0000 Buried
41 W B 0.0000 Buried
42 V B 0.0000 Buried
43 R B 0.0000 Buried
44 Q B -0.5637 Soluble
45 A B -1.0412 Soluble
46 P B -0.9831 Soluble
47 G B -1.3352 Soluble
48 Q B -2.0008 Soluble
49 G B -1.3032 Soluble
50 L B 0.0000 Buried
51 E B -0.8756 Soluble
52 W B 0.0000 Buried
53 I B 0.0000 Buried
54 G B 0.0000 Buried
55 Q B 0.0000 Buried
56 I B 0.0000 Buried
57 Y B -1.3778 Soluble
58 P B 0.0000 Buried
59 G B -2.0435 Soluble
62 D B -3.2336 Soluble
63 D B -3.5803 Soluble
64 D B -3.2465 Soluble
65 T B -1.7020 Soluble
66 N B -0.8242 Soluble
67 Y B -0.5766 Soluble
68 N B 0.0000 Buried
69 A B -1.3550 Soluble
70 K B -2.1264 Soluble
71 F B 0.0000 Buried
72 Q B -2.0264 Soluble
74 G B -1.4881 Soluble
75 R B -1.4036 Soluble
76 V B 0.0000 Buried
77 T B -0.8262 Soluble
78 I B 0.0000 Buried
79 T B -0.8857 Soluble
80 V B -1.1854 Soluble
81 D B -2.0712 Soluble
82 K B -2.3873 Soluble
83 S B -1.3220 Soluble
84 T B -1.1054 Soluble
85 T B -1.2240 Soluble
86 T B 0.0000 Buried
87 A B 0.0000 Buried
88 Y B -0.6433 Soluble
89 M B 0.0000 Buried
90 E B -1.3851 Soluble
91 L B 0.0000 Buried
92 S B -1.2194 Soluble
93 S B -1.3195 Soluble
94 L B 0.0000 Buried
95 R B -3.1679 Soluble
96 S B -2.4577 Soluble
97 E B -2.7125 Soluble
98 D B 0.0000 Buried
99 T B -1.0001 Soluble
100 A B 0.0000 Buried
101 V B 0.1230 Aggregation-prone
102 Y B 0.0000 Buried
103 F B 0.0000 Buried
104 C B 0.0000 Buried
105 A B 0.0000 Buried
106 G B 0.0000 Buried
107 S B 0.0000 Buried
108 L B 0.5947 Aggregation-prone
109 M B 0.7770 Aggregation-prone
110 V B 1.3396 Aggregation-prone
111 T B 0.6126 Aggregation-prone
112A T B 0.4542 Aggregation-prone
112 G B 0.0000 Buried
113 A B 0.0000 Buried
114 P B 0.0000 Buried
115 F B 0.0000 Buried
116 D B -0.2606 Soluble
117 Y B -0.0142 Soluble
118 W B 0.0000 Buried
119 G B 0.0000 Buried
120 Q B -1.4978 Soluble
121 G B -0.8472 Soluble
122 T B 0.0000 Buried
123 T B -0.1995 Soluble
124 V B 0.0000 Buried
125 T B 0.0000 Buried
126 V B 0.0000 Buried
127 S B -1.3894 Soluble
128 S B -1.2094 Soluble
129 A B -0.6729 Soluble
130 S B -0.7508 Soluble
131 T B -0.7048 Soluble
132 K B -1.4314 Soluble
133 G B -1.5665 Soluble
134 P B 0.0000 Buried
135 S B -0.4220 Soluble
136 V B 0.0000 Buried
137 F B 0.0000 Buried
138 P B -1.0385 Soluble
139 L B 0.0000 Buried
140 A B -0.7694 Soluble
141 P B 0.0000 Buried
142 S B -0.4582 Soluble
143 S B -0.3657 Soluble
144 G B -0.6527 Soluble
145 T B -0.5116 Soluble
146 A B -0.3199 Soluble
147 A B 0.0000 Buried
148 L B 0.0000 Buried
149 G B 0.0000 Buried
150 C B 0.0000 Buried
151 L B 0.0000 Buried
152 V B 0.0000 Buried
153 K B 0.0000 Buried
154 D B -0.5264 Soluble
155 Y B 0.0000 Buried
156 F B 0.0000 Buried
157 P B 0.0000 Buried
158 E B -0.5028 Soluble
159 P B -0.9120 Soluble
160 V B 0.0000 Buried
161 T B -0.9272 Soluble
162 V B -0.4511 Soluble
163 S B -0.5254 Soluble
164 W B 0.0000 Buried
165 N B -0.7621 Soluble
166 S B -0.6691 Soluble
167 G B -0.6384 Soluble
168 A B -0.2943 Soluble
169 L B -0.0628 Soluble
170 T B -0.2112 Soluble
171 S B -0.2304 Soluble
172 G B -0.2864 Soluble
173 V B 0.1636 Aggregation-prone
174 H B -0.3566 Soluble
175 T B -0.0252 Soluble
176 F B 0.0000 Buried
177 P B -0.4286 Soluble
178 A B 0.0756 Aggregation-prone
179 V B 0.2995 Aggregation-prone
180 L B 0.9467 Aggregation-prone
181 Q B 0.1192 Aggregation-prone
182 S B -0.1169 Soluble
183 S B -0.2353 Soluble
184 G B -0.0223 Soluble
185 L B -0.0400 Soluble
186 Y B 0.2323 Aggregation-prone
187 S B 0.0000 Buried
188 L B 0.0000 Buried
189 S B 0.0000 Buried
190 S B 0.0000 Buried
191 V B 0.0000 Buried
192 V B 0.0000 Buried
193 T B -0.1879 Soluble
194 V B 0.0000 Buried
195 P B -0.5848 Soluble
196 S B -0.6476 Soluble
197 S B -0.6950 Soluble
198 S B -0.7222 Soluble
199 L B -0.9457 Soluble
200 G B -1.0595 Soluble
201 T B -0.9002 Soluble
202 Q B -1.4575 Soluble
203 T B -1.2823 Soluble
204 Y B 0.0000 Buried
205 I B -1.2655 Soluble
206 C B 0.0000 Buried
207 N B -1.5966 Soluble
208 V B 0.0000 Buried
209 N B -2.6494 Soluble
210 H B 0.0000 Buried
211 K B -2.9698 Soluble
212 P B -1.7616 Soluble
213 S B -1.9799 Soluble
214 N B -2.7565 Soluble
215 T B -2.2810 Soluble
216 K B -2.9488 Soluble
217 V B -1.7041 Soluble
218 D B -2.4734 Soluble
219 K B -2.1512 Soluble
220 R B -2.5543 Soluble
221 V B 0.0000 Buried
222 E B -2.1062 Soluble
223 P B -1.0184 Soluble
1 D A -2.0209 Soluble
2 I A -2.0182 Soluble
3 Q A -2.0922 Soluble
4 M A 0.0000 Buried
5 T A -1.1414 Soluble
6 Q A 0.0000 Buried
7 S A -0.6367 Soluble
8 P A -0.6051 Soluble
9 S A -0.8912 Soluble
10 S A -0.8722 Soluble
11 L A -0.5942 Soluble
12 S A -0.9222 Soluble
13 A A 0.0000 Buried
14 S A -0.3790 Soluble
15 V A 0.5104 Aggregation-prone
16 G A -0.5420 Soluble
17 D A -1.3388 Soluble
18 R A -2.1063 Soluble
19 V A 0.0000 Buried
20 T A -0.5474 Soluble
21 I A 0.0000 Buried
22 T A -0.7030 Soluble
23 C A 0.0000 Buried
24 K A -2.2377 Soluble
25 A A 0.0000 Buried
26 S A -2.1400 Soluble
27 Q A -3.1080 Soluble
28 D A -2.9770 Soluble
29 V A 0.0000 Buried
36 G A -0.9221 Soluble
37 I A 0.4303 Aggregation-prone
38 A A -0.0640 Soluble
39 V A 0.0000 Buried
40 A A 0.0000 Buried
41 W A 0.0000 Buried
42 Y A 0.0000 Buried
43 Q A 0.0000 Buried
44 Q A 0.0000 Buried
45 K A -2.9895 Soluble
46 P A -2.0595 Soluble
47 G A -1.9464 Soluble
48 K A -3.0462 Soluble
49 A A -2.0053 Soluble
50 P A 0.0000 Buried
51 K A -2.1114 Soluble
52 F A 0.0000 Buried
53 L A 0.0000 Buried
54 I A 0.0000 Buried
55 Y A 0.0720 Aggregation-prone
56 Y A 0.3822 Aggregation-prone
57 A A 0.0000 Buried
65 S A -0.6307 Soluble
66 H A -1.2363 Soluble
67 R A -1.5342 Soluble
68 G A -0.6730 Soluble
69 W A 0.6423 Aggregation-prone
70 G A -0.2431 Soluble
71 V A -0.7994 Soluble
72 P A -1.0959 Soluble
74 D A -2.1822 Soluble
75 R A -1.5544 Soluble
76 F A 0.0000 Buried
77 S A -1.0397 Soluble
78 G A -0.6328 Soluble
79 S A -0.6044 Soluble
80 G A -0.8232 Soluble
83 S A -0.8744 Soluble
84 G A -1.5645 Soluble
85 T A -2.1651 Soluble
86 D A -2.6010 Soluble
87 F A 0.0000 Buried
88 T A -0.7559 Soluble
89 L A 0.0000 Buried
90 T A -0.5712 Soluble
91 I A 0.0000 Buried
92 S A -1.4490 Soluble
93 S A -1.1276 Soluble
94 L A 0.0000 Buried
95 Q A -0.8640 Soluble
96 P A -0.8384 Soluble
97 E A -2.0225 Soluble
98 D A 0.0000 Buried
99 F A -0.7708 Soluble
100 A A 0.0000 Buried
101 T A -1.3328 Soluble
102 Y A 0.0000 Buried
103 F A 0.0000 Buried
104 C A 0.0000 Buried
105 Q A 0.0000 Buried
106 Q A 0.0000 Buried
107 Y A -0.3475 Soluble
108 R A -1.7938 Soluble
109 S A -0.9723 Soluble
114 Y A 0.1039 Aggregation-prone
115 P A -0.4096 Soluble
116 L A 0.0000 Buried
117 T A -0.7994 Soluble
118 F A 0.0000 Buried
119 G A 0.0000 Buried
120 Q A -1.6726 Soluble
121 G A 0.0000 Buried
122 T A 0.0000 Buried
123 K A -1.9575 Soluble
124 L A 0.0000 Buried
125 E A -1.2256 Soluble
126 I A -0.4912 Soluble
127 K A -1.3692 Soluble
128 R A -1.0718 Soluble
129 T A -0.2367 Soluble
130 V A 0.4331 Aggregation-prone
131 A A 0.1284 Aggregation-prone
132 A A -0.1103 Soluble
133 P A 0.0000 Buried
134 S A -0.1005 Soluble
135 V A 0.0000 Buried
136 F A 0.0977 Aggregation-prone
137 I A 0.0490 Aggregation-prone
138 F A 0.0000 Buried
139 P A -0.7714 Soluble
140 P A 0.0000 Buried
141 S A -1.3961 Soluble
142 D A -2.6325 Soluble
143 E A -2.3674 Soluble
144 Q A 0.0000 Buried
145 L A -1.8616 Soluble
146 K A -2.6119 Soluble
147 S A -1.6359 Soluble
148 G A -1.1831 Soluble
149 T A -1.0332 Soluble
150 A A 0.0000 Buried
151 S A 0.0000 Buried
152 V A 0.0000 Buried
153 V A 0.0000 Buried
154 C A 0.0000 Buried
155 L A 0.0000 Buried
156 L A 0.0000 Buried
157 N A 0.0000 Buried
158 N A -0.8715 Soluble
159 F A 0.0000 Buried
160 Y A 0.0000 Buried
161 P A -1.6854 Soluble
162 R A -2.8633 Soluble
163 E A -3.1344 Soluble
164 A A -2.3713 Soluble
165 K A -2.9585 Soluble
166 V A 0.0000 Buried
167 Q A -1.3936 Soluble
168 W A 0.0000 Buried
169 K A -0.9512 Soluble
170 V A 0.0000 Buried
171 D A -1.5866 Soluble
172 N A -1.3224 Soluble
173 A A -0.4451 Soluble
174 L A 0.0405 Aggregation-prone
175 Q A -0.5683 Soluble
176 S A -0.7221 Soluble
177 G A -0.9358 Soluble
178 N A -0.8440 Soluble
179 S A -1.3933 Soluble
180 Q A -1.8275 Soluble
181 E A -2.3718 Soluble
182 S A -0.9800 Soluble
183 V A -0.8284 Soluble
184 T A -1.2067 Soluble
185 E A -2.3247 Soluble
186 Q A -1.9579 Soluble
187 D A -2.1840 Soluble
188 S A -1.7918 Soluble
189 K A -2.3430 Soluble
190 D A -1.7909 Soluble
191 S A -1.8439 Soluble
192 T A 0.0000 Buried
193 Y A 0.0000 Buried
194 S A 0.0000 Buried
195 L A 0.0000 Buried
196 S A 0.0000 Buried
197 S A 0.0000 Buried
198 T A -0.7829 Soluble
199 L A 0.0000 Buried
200 T A -0.5211 Soluble
201 L A -0.8484 Soluble
202 S A -1.3088 Soluble
203 K A -2.3336 Soluble
204 A A -2.1523 Soluble
205 D A -3.1832 Soluble
206 Y A 0.0000 Buried
207 E A -3.9309 Soluble
208 K A -3.8200 Soluble
209 H A -2.9364 Soluble
210 K A -3.0649 Soluble
211 V A -1.3242 Soluble
212 Y A 0.0000 Buried
213 A A 0.0000 Buried
214 C A 0.0000 Buried
215 E A -1.0987 Soluble
216 V A 0.0000 Buried
217 T A -1.3736 Soluble
218 H A 0.0000 Buried
219 Q A -1.8032 Soluble
220 G A -0.4683 Soluble
221 L A -0.2127 Soluble
222 S A -0.4202 Soluble
223 S A -0.3780 Soluble
224 P A -0.5939 Soluble
225 V A 0.0762 Aggregation-prone
226 T A -0.5796 Soluble
227 K A -0.7874 Soluble
228 S A -0.6809 Soluble
229 F A -1.1010 Soluble
230 N A -2.0854 Soluble
231 R A -2.6699 Soluble
232 G A -2.2290 Soluble
233 E A -2.6068 Soluble

3D Structure — colored by A4D score

Sequence - click residue to focus in viewer  |  colored by A4D score
Load structure to view sequence…
Color Legend (B-factor = A4D Score)
Score > 1.5 — highly aggregation-prone
Score 0.5–1.5 — aggregation-prone
Score ≈ 0 — buried
Score −1 to −0.5 — soluble
Score < −2.5 — highly soluble
pH Structure
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A4D Score Threshold
Highlight residues > threshold in the sequence panel
CDR Regions
HCDR1
HCDR2
HCDR3
LCDR1
LCDR2
LCDR3
Display Options

pH-Dependent Aggregation Profiles

A4D scores calculated across 11 pH conditions (4.0–9.0, step 0.5). Click a row to view the structure at that pH. The input structure is globular — max score is recommended for pH analysis.

pH Avg A4D Score Max A4D Score Downloads
4.0 -0.7533 2.8708 CSV PDB
4.5 -0.8049 2.8547 CSV PDB
5.0 -0.8635 2.8387 CSV PDB
5.5 -0.9187 2.8276 CSV PDB
6.0 -0.9588 2.826 CSV PDB
6.5 -0.9749 2.8326 CSV PDB
7.0 -0.9672 2.8367 CSV PDB
7.5 -0.9443 2.831 CSV PDB
8.0 -0.9127 2.818 CSV PDB
8.5 -0.8735 2.8035 CSV PDB
9.0 -0.8251 2.7922 CSV PDB
Average A4D Score vs pH
Max A4D Score vs pH