Zemocimig / 8gv2

A4DAB305_8gv2_A_B | Source PDB: 8gv2 | Chains: A, B | Done
100
Yes
10 Å
Yes
Avg A4D Score
-0.723
Max Score
1.3118
Min Score
-3.3606
Total Score
-310.87
Score CDR
-0.6198
Score non-CDR
-0.7356

Calculation Parameters

Chain Sequence(s) QVQLVQSGSELKKPGASVKVSCKASGYTFTQNNMDWVRQAPGQGLEWMGDINTRSGGVIYNEEFQDRLIMTVDKSTDTAYMELSSLRSEDTATYHCARRKSYGYYLDVWGEGTLVTVSSASTKGPSVFPLAPCSRTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYTCNVDHKPSNTKVDKRVESSYVLTQPVSVSVALGQTATITCEGEQIGSKEVHWYHQRPGQAPILVMFRDARRPSGIPERLSGSNSGNTASLTISGAEAGDEGDYYCQVWDSSSYTVFGGGTKVTVVGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC input.pdb
Selected Chain(s) A (Heavy), B (Light)
Distance of Aggregation 10 Å
FoldX Energy Minimization Yes
pH Calculations Yes
Downloads Download all data (.tar.gz)

Aggrescan4D Profile

Aggregation-prone (score > 0)
Soluble (score < 0)
Buried (score = 0)

Per-Residue A4D Scores

Download CSV
Minimum Score -3.3606
Maximum Score 1.3118
Average Score -0.723
Total Score -310.8712

Residues with A4D score > 0.0 are highlighted as aggregation-prone.

Index Residue Chain A4D Score Classification
1 Q A -1.4316 Soluble
2 V A -0.6342 Soluble
3 Q A -1.0979 Soluble
4 L A 0.0000 Buried
5 V A 0.6148 Aggregation-prone
6 Q A -0.1860 Soluble
7 S A -0.7210 Soluble
8 G A -0.8677 Soluble
9 S A -1.1492 Soluble
11 E A -1.5718 Soluble
12 L A -1.0032 Soluble
13 K A -1.6480 Soluble
14 K A -2.4278 Soluble
15 P A -2.1821 Soluble
16 G A -1.5527 Soluble
17 A A -1.2174 Soluble
18 S A -1.3246 Soluble
19 V A 0.0000 Buried
20 K A -1.8762 Soluble
21 V A 0.0000 Buried
22 S A -0.5310 Soluble
23 C A 0.0000 Buried
24 K A -1.1426 Soluble
25 A A 0.0000 Buried
26 S A -0.8771 Soluble
27 G A -0.9278 Soluble
28 Y A -0.5482 Soluble
29 T A -0.4662 Soluble
30 F A 0.0000 Buried
35 T A -1.6893 Soluble
36 Q A -1.3426 Soluble
37 N A 0.0000 Buried
38 N A -0.9114 Soluble
39 M A 0.0000 Buried
40 D A 0.0000 Buried
41 W A 0.0000 Buried
42 V A 0.0000 Buried
43 R A -0.6238 Soluble
44 Q A -0.8885 Soluble
45 A A -1.1484 Soluble
46 P A -0.9146 Soluble
47 G A -1.2245 Soluble
48 Q A -1.7849 Soluble
49 G A -1.2834 Soluble
50 L A 0.0000 Buried
51 E A -0.8843 Soluble
52 W A 0.0000 Buried
53 M A 0.0000 Buried
54 G A 0.0000 Buried
55 D A 0.0000 Buried
56 I A 0.0000 Buried
57 N A -1.4331 Soluble
58 T A 0.0000 Buried
59 R A -2.7916 Soluble
62 S A -1.6019 Soluble
63 G A -1.4159 Soluble
64 G A -0.7219 Soluble
65 V A 0.2438 Aggregation-prone
66 I A 0.1891 Aggregation-prone
67 Y A -0.7552 Soluble
68 N A -1.6462 Soluble
69 E A -3.3412 Soluble
70 E A -3.3606 Soluble
71 F A 0.0000 Buried
72 Q A -2.6953 Soluble
74 D A -2.7495 Soluble
75 R A 0.0000 Buried
76 L A 0.0000 Buried
77 I A 0.6430 Aggregation-prone
78 M A 0.0000 Buried
79 T A -0.0864 Soluble
80 V A -1.3285 Soluble
81 D A -2.0817 Soluble
82 K A -2.7752 Soluble
83 S A -1.4913 Soluble
84 T A -1.4995 Soluble
85 D A -2.0186 Soluble
86 T A -1.3256 Soluble
87 A A 0.0000 Buried
88 Y A -0.3738 Soluble
89 M A 0.0000 Buried
90 E A -0.8754 Soluble
91 L A 0.0000 Buried
92 S A -0.9455 Soluble
93 S A -1.2440 Soluble
94 L A 0.0000 Buried
95 R A -2.6656 Soluble
96 S A -2.2166 Soluble
97 E A -2.4123 Soluble
98 D A 0.0000 Buried
99 T A -0.9951 Soluble
100 A A 0.0000 Buried
101 T A -0.3396 Soluble
102 Y A 0.0000 Buried
103 H A 0.0000 Buried
104 C A 0.0000 Buried
105 A A 0.0000 Buried
106 R A -0.3541 Soluble
107 R A 0.0000 Buried
108 K A -0.2605 Soluble
109 S A 0.0635 Aggregation-prone
110 Y A 1.1456 Aggregation-prone
112 G A 0.6942 Aggregation-prone
113 Y A 0.7221 Aggregation-prone
114 Y A 0.0000 Buried
115 L A 0.0000 Buried
116 D A -0.1159 Soluble
117 V A -0.0316 Soluble
118 W A 0.0000 Buried
119 G A 0.0000 Buried
120 E A -1.8911 Soluble
121 G A -0.9630 Soluble
122 T A 0.0000 Buried
123 L A -0.3712 Soluble
124 V A 0.0000 Buried
125 T A -0.9590 Soluble
126 V A 0.0000 Buried
127 S A -1.3919 Soluble
128 S A -0.9591 Soluble
129 A A -0.5862 Soluble
130 S A -0.6552 Soluble
131 T A -0.7555 Soluble
132 K A -1.0200 Soluble
133 G A -1.2400 Soluble
134 P A 0.0000 Buried
135 S A -0.2853 Soluble
136 V A 0.0000 Buried
137 F A -0.5067 Soluble
138 P A -0.6688 Soluble
139 L A 0.0000 Buried
140 A A -0.1984 Soluble
141 P A -0.5887 Soluble
142 C A -0.4545 Soluble
143 S A -1.2026 Soluble
144 R A -2.2187 Soluble
145 T A -1.1811 Soluble
146 S A -1.4555 Soluble
147 E A -2.3237 Soluble
148 S A -1.3221 Soluble
149 T A -0.9307 Soluble
150 A A -0.7417 Soluble
151 A A -0.0711 Soluble
152 L A 0.0000 Buried
153 G A 0.0000 Buried
154 C A 0.0000 Buried
155 L A 0.0000 Buried
156 V A 0.0000 Buried
157 K A -0.2465 Soluble
158 D A -0.3333 Soluble
159 Y A 0.0000 Buried
160 F A -0.0620 Soluble
161 P A 0.0000 Buried
162 E A -0.4176 Soluble
163 P A -0.6425 Soluble
164 V A -0.4832 Soluble
165 T A -0.4491 Soluble
166 V A -0.1123 Soluble
167 S A -0.4358 Soluble
168 W A 0.0000 Buried
169 N A -1.0240 Soluble
170 S A -0.7490 Soluble
171 G A -0.5306 Soluble
172 A A -0.2346 Soluble
173 L A -0.0690 Soluble
174 T A -0.1702 Soluble
175 S A -0.2169 Soluble
176 G A -0.2628 Soluble
177 V A 0.1812 Aggregation-prone
178 H A -0.1076 Soluble
179 T A -0.0276 Soluble
180 F A 0.0000 Buried
181 P A -0.1310 Soluble
182 A A 0.2514 Aggregation-prone
183 V A 0.0000 Buried
184 L A 0.9890 Aggregation-prone
185 Q A 0.1407 Aggregation-prone
186 S A -0.2241 Soluble
187 S A -0.2060 Soluble
188 G A 0.0448 Aggregation-prone
189 L A 0.2292 Aggregation-prone
190 Y A 0.4637 Aggregation-prone
191 S A 0.0000 Buried
192 L A 0.0000 Buried
193 S A 0.0000 Buried
194 S A 0.0000 Buried
195 V A 0.0000 Buried
196 V A 0.0000 Buried
197 T A -0.1854 Soluble
198 V A 0.0000 Buried
199 P A -0.6666 Soluble
200 S A -0.7840 Soluble
201 S A -0.6809 Soluble
202 S A -0.4572 Soluble
203 L A -0.4226 Soluble
204 G A -0.7504 Soluble
205 T A -0.6815 Soluble
206 Q A -0.9795 Soluble
207 T A -1.0480 Soluble
208 Y A 0.0000 Buried
209 T A -1.6684 Soluble
210 C A 0.0000 Buried
211 N A -1.5904 Soluble
212 V A 0.0000 Buried
213 D A -1.6961 Soluble
214 H A 0.0000 Buried
215 K A -2.8289 Soluble
216 P A -1.7584 Soluble
217 S A -1.8197 Soluble
218 N A -2.6199 Soluble
219 T A -1.9920 Soluble
220 K A -2.6051 Soluble
221 V A -1.4861 Soluble
222 D A -2.6672 Soluble
223 K A -2.0518 Soluble
224 R A -2.5452 Soluble
225 V A -1.2581 Soluble
226 E A -1.2312 Soluble
227 S A -1.0516 Soluble
1 S B 0.3165 Aggregation-prone
2 Y B 0.6728 Aggregation-prone
3 V B 1.3118 Aggregation-prone
4 L B 0.0000 Buried
5 T B -0.2210 Soluble
6 Q B -0.3393 Soluble
7 P B 0.2773 Aggregation-prone
8 V B 1.1634 Aggregation-prone
9 S B 0.1222 Aggregation-prone
11 V B -0.0177 Soluble
12 S B -0.3078 Soluble
13 V B 0.0000 Buried
14 A B -0.4407 Soluble
15 L B -0.6606 Soluble
16 G B -1.3179 Soluble
17 Q B -1.5241 Soluble
18 T B -0.8220 Soluble
19 A B -0.3422 Soluble
20 T B -0.1123 Soluble
21 I B 0.0000 Buried
22 T B -0.4846 Soluble
23 C B 0.0000 Buried
24 E B -2.0443 Soluble
25 G B 0.0000 Buried
26 E B -2.8933 Soluble
27 Q B -3.0826 Soluble
28 I B 0.0000 Buried
29 G B -2.3484 Soluble
36 S B -1.7363 Soluble
37 K B -2.1451 Soluble
38 E B -2.3789 Soluble
39 V B 0.0000 Buried
40 H B 0.0000 Buried
41 W B 0.0000 Buried
42 Y B 0.0000 Buried
43 H B 0.0000 Buried
44 Q B -1.0973 Soluble
45 R B -1.7612 Soluble
46 P B -1.5183 Soluble
47 G B -1.6898 Soluble
48 Q B -2.0550 Soluble
49 A B -1.2466 Soluble
50 P B 0.0000 Buried
51 I B 0.6757 Aggregation-prone
52 L B 0.0000 Buried
53 V B 0.0000 Buried
54 M B 0.0000 Buried
55 F B -1.4211 Soluble
56 R B -2.2805 Soluble
57 D B -2.0799 Soluble
65 A B -1.7586 Soluble
66 R B -2.5963 Soluble
67 R B -2.3352 Soluble
68 P B -0.9718 Soluble
69 S B -0.7955 Soluble
70 G B -0.8496 Soluble
71 I B -1.0534 Soluble
72 P B -1.4047 Soluble
74 E B -2.5436 Soluble
75 R B -1.5629 Soluble
76 L B 0.0000 Buried
77 S B -1.2835 Soluble
78 G B -0.9312 Soluble
79 S B -1.0396 Soluble
80 N B -1.6317 Soluble
83 S B -1.4310 Soluble
84 G B -2.1632 Soluble
85 N B -3.0414 Soluble
86 T B -1.9363 Soluble
87 A B 0.0000 Buried
88 S B -0.4975 Soluble
89 L B 0.0000 Buried
90 T B -0.3010 Soluble
91 I B 0.0000 Buried
92 S B -1.3160 Soluble
93 G B -1.5615 Soluble
94 A B 0.0000 Buried
95 E B -1.9802 Soluble
96 A B -1.1229 Soluble
97 G B -1.1088 Soluble
98 D B 0.0000 Buried
99 E B 0.0000 Buried
100 G B 0.0000 Buried
101 D B -1.3163 Soluble
102 Y B 0.0000 Buried
103 Y B 0.0000 Buried
104 C B 0.0000 Buried
105 Q B 0.0000 Buried
106 V B 0.0000 Buried
107 W B 0.1468 Aggregation-prone
108 D B -0.2267 Soluble
109 S B -0.2422 Soluble
113 S B -0.2690 Soluble
114 S B -0.0480 Soluble
115 Y B 0.4529 Aggregation-prone
116 T B 0.0000 Buried
117 V B 0.6097 Aggregation-prone
118 F B 0.3573 Aggregation-prone
119 G B 0.0000 Buried
120 G B -0.4809 Soluble
121 G B -0.6215 Soluble
122 T B 0.0000 Buried
123 K B -1.2926 Soluble
124 V B 0.0000 Buried
125 T B -0.2382 Soluble
126 V B 0.0000 Buried
127 V B 0.2193 Aggregation-prone
128 G B -0.4667 Soluble
129 Q B -0.8827 Soluble
130 P B -1.1352 Soluble
131 K B -2.3562 Soluble
132 A B -1.4050 Soluble
133 A B -0.9133 Soluble
134 P B -0.5016 Soluble
135 S B -0.3206 Soluble
136 V B 0.0000 Buried
137 T B -0.4439 Soluble
138 L B 0.0000 Buried
139 F B 0.0000 Buried
140 P B 0.0000 Buried
141 P B 0.0000 Buried
142 S B -0.6551 Soluble
143 S B -1.0951 Soluble
144 E B -2.0411 Soluble
145 E B 0.0000 Buried
146 L B -1.8560 Soluble
147 Q B -2.2193 Soluble
148 A B -1.8143 Soluble
149 N B -2.5882 Soluble
150 K B -2.5437 Soluble
151 A B 0.0000 Buried
152 T B 0.0000 Buried
153 L B 0.0000 Buried
154 V B 0.0000 Buried
155 C B 0.0000 Buried
156 L B 0.0000 Buried
157 I B 0.0000 Buried
158 S B -0.6535 Soluble
159 D B -1.5262 Soluble
160 F B 0.0000 Buried
161 Y B 0.0000 Buried
162 P B -0.9775 Soluble
163 G B -0.4785 Soluble
164 A B -0.2251 Soluble
165 V B -0.1128 Soluble
166 T B -0.0996 Soluble
167 V B 0.1608 Aggregation-prone
168 A B -0.4712 Soluble
169 W B 0.0000 Buried
170 K B -1.1741 Soluble
171 A B 0.0000 Buried
172 D B -1.2229 Soluble
173 S B -0.7152 Soluble
174 S B -0.8525 Soluble
175 P B -1.0030 Soluble
176 V B -0.9119 Soluble
177 K B -1.6392 Soluble
178 A B -0.7905 Soluble
179 G B -0.5128 Soluble
180 V B -0.3322 Soluble
181 E B -0.5810 Soluble
182 T B -0.1839 Soluble
183 T B 0.0000 Buried
184 T B -0.1892 Soluble
185 P B -0.2723 Soluble
186 S B -0.5847 Soluble
187 K B -1.3366 Soluble
188 Q B -1.4017 Soluble
189 S B -1.4650 Soluble
190 N B -1.9249 Soluble
191 N B -1.6804 Soluble
192 K B -1.8342 Soluble
193 Y B -0.9383 Soluble
194 A B 0.0000 Buried
195 A B 0.0000 Buried
196 S B 0.0000 Buried
197 S B 0.0000 Buried
198 Y B 0.0000 Buried
199 L B 0.0000 Buried
200 S B -0.6222 Soluble
201 L B 0.0000 Buried
202 T B -1.8788 Soluble
203 P B 0.0000 Buried
204 E B -3.1727 Soluble
205 Q B -2.4085 Soluble
206 W B 0.0000 Buried
207 K B -3.0390 Soluble
208 S B -2.4012 Soluble
209 H B -2.2966 Soluble
210 R B -2.6319 Soluble
211 S B -1.7068 Soluble
212 Y B 0.0000 Buried
213 S B -1.0676 Soluble
214 C B 0.0000 Buried
215 Q B -0.9762 Soluble
216 V B 0.0000 Buried
217 T B -0.6220 Soluble
218 H B 0.0000 Buried
219 E B -2.3371 Soluble
220 G B -1.4499 Soluble
221 S B -0.8071 Soluble
222 T B -0.5792 Soluble
223 V B -0.3925 Soluble
224 E B -1.8347 Soluble
225 K B -1.4259 Soluble
226 T B -1.1167 Soluble
227 V B 0.0000 Buried
228 A B -1.4143 Soluble
229 P B -1.3064 Soluble
230 T B -1.2916 Soluble
231 E B -1.7016 Soluble
232 C B -0.2099 Soluble

3D Structure — colored by A4D score

Sequence - click residue to focus in viewer  |  colored by A4D score
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Color Legend (B-factor = A4D Score)
Score > 1.5 — highly aggregation-prone
Score 0.5–1.5 — aggregation-prone
Score ≈ 0 — buried
Score −1 to −0.5 — soluble
Score < −2.5 — highly soluble
pH Structure
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A4D Score Threshold
Highlight residues > threshold in the sequence panel
CDR Regions
HCDR1
HCDR2
HCDR3
LCDR1
LCDR2
LCDR3
Display Options

pH-Dependent Aggregation Profiles

A4D scores calculated across 11 pH conditions (4.0–9.0, step 0.5). Click a row to view the structure at that pH. The input structure is globular — max score is recommended for pH analysis.

pH Avg A4D Score Max A4D Score Downloads
4.0 -0.7324 1.5422 CSV PDB
4.5 -0.7749 1.5422 CSV PDB
5.0 -0.8304 1.5422 CSV PDB
5.5 -0.8875 1.5422 CSV PDB
6.0 -0.933 1.5422 CSV PDB
6.5 -0.9557 1.5422 CSV PDB
7.0 -0.9517 1.5422 CSV PDB
7.5 -0.928 1.5422 CSV PDB
8.0 -0.8937 1.5422 CSV PDB
8.5 -0.8538 1.5422 CSV PDB
9.0 -0.8103 1.6167 CSV PDB
Average A4D Score vs pH
Max A4D Score vs pH