Tomuzotuximab / 5hpm

A4DAB272_5hpm_D_C | Source PDB: 5hpm | Chains: D, C | Done
99.56
Yes
10 Å
Yes
Avg A4D Score
-0.6627
Max Score
2.4216
Min Score
-3.705
Total Score
-282.96
Score CDR
-0.3267
Score non-CDR
-0.7032

Calculation Parameters

Chain Sequence(s) QVQLKQSGPGLVQPSQSLSITCTVSGFSLTNYGVHWVRQSPGKGLEWLGVIWSGGNTDYNTPFTSRLSINKDNSKSQVFFKMNSLQSNDTAIYYCARALTYYDYEFAYWGQGTLVTVSAASTKGPSVFPLAPSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKDILLTQSPVILSVSPGERVSFSCRASQSIGTNIHWYQQRTNGSPRLLIKYASESISGIPSRFSGSGSGTDFTLSINSVESEDIADYYCQQNNNWPTTFGAGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGA input.pdb
Selected Chain(s) D (Heavy), C (Light)
Distance of Aggregation 10 Å
FoldX Energy Minimization Yes
pH Calculations Yes
Downloads Download all data (.tar.gz)

Aggrescan4D Profile

Aggregation-prone (score > 0)
Soluble (score < 0)
Buried (score = 0)

Per-Residue A4D Scores

Download CSV
Minimum Score -3.705
Maximum Score 2.4216
Average Score -0.6627
Total Score -282.9646

Residues with A4D score > 0.0 are highlighted as aggregation-prone.

Index Residue Chain A4D Score Classification
1 Q D -1.5525 Soluble
2 V D -1.0141 Soluble
3 Q D -1.9639 Soluble
4 L D 0.0000 Buried
5 K D -2.4309 Soluble
6 Q D 0.0000 Buried
7 S D -0.8707 Soluble
8 G D -1.1224 Soluble
9 P D -0.4165 Soluble
11 G D -0.3547 Soluble
12 L D 0.0648 Aggregation-prone
13 V D -0.6276 Soluble
14 Q D -1.3092 Soluble
15 P D -1.4634 Soluble
16 S D -1.6018 Soluble
17 Q D -2.0184 Soluble
18 S D -1.6822 Soluble
19 L D 0.0000 Buried
20 S D -0.6936 Soluble
21 I D 0.0000 Buried
22 T D -0.4141 Soluble
23 C D 0.0000 Buried
24 T D -1.2073 Soluble
25 V D 0.0000 Buried
26 S D -1.3933 Soluble
27 G D -1.0777 Soluble
28 F D -0.6155 Soluble
29 S D -1.0012 Soluble
30 L D 0.0000 Buried
35 T D -1.0079 Soluble
36 N D -0.8872 Soluble
37 Y D 0.4552 Aggregation-prone
38 G D 0.0000 Buried
39 V D 0.0000 Buried
40 H D 0.0000 Buried
41 W D 0.0000 Buried
42 V D 0.0000 Buried
43 R D 0.0000 Buried
44 Q D -0.4418 Soluble
45 S D -0.9774 Soluble
46 P D -1.1484 Soluble
47 G D -1.7426 Soluble
48 K D -2.2382 Soluble
49 G D -1.1604 Soluble
50 L D 0.0000 Buried
51 E D 0.0000 Buried
52 W D 0.0000 Buried
53 L D 0.0000 Buried
54 G D 0.0000 Buried
55 V D 0.0000 Buried
56 I D 0.0000 Buried
57 W D -0.5401 Soluble
58 S D -0.7065 Soluble
59 G D -1.1395 Soluble
63 G D -1.5667 Soluble
64 N D -1.8621 Soluble
65 T D -1.3367 Soluble
66 D D -1.0875 Soluble
67 Y D -0.4537 Soluble
68 N D -0.2272 Soluble
69 T D -0.3625 Soluble
70 P D -0.3964 Soluble
71 F D 0.0000 Buried
72 T D -0.4989 Soluble
74 S D -0.5883 Soluble
75 R D -1.0281 Soluble
76 L D 0.0000 Buried
77 S D -1.1008 Soluble
78 I D 0.0000 Buried
79 N D -1.7843 Soluble
80 K D -1.5299 Soluble
81 D D -1.9681 Soluble
82 N D -2.5725 Soluble
83 S D -1.8862 Soluble
84 K D -2.5047 Soluble
85 S D -1.7785 Soluble
86 Q D -1.5973 Soluble
87 V D 0.0000 Buried
88 F D -0.2476 Soluble
89 F D 0.0000 Buried
90 K D -1.6190 Soluble
91 M D 0.0000 Buried
92 N D -1.9006 Soluble
93 S D -1.5964 Soluble
94 L D 0.0000 Buried
95 Q D -2.2092 Soluble
96 S D -1.5566 Soluble
97 N D -2.0870 Soluble
98 D D 0.0000 Buried
99 T D -0.6227 Soluble
100 A D 0.0000 Buried
101 I D 0.5692 Aggregation-prone
102 Y D 0.0000 Buried
103 Y D 0.0000 Buried
104 C D 0.0000 Buried
105 A D 0.0000 Buried
106 R D 0.0000 Buried
107 A D 0.0000 Buried
108 L D 0.9973 Aggregation-prone
109 T D 1.1321 Aggregation-prone
110 Y D 1.8316 Aggregation-prone
111 Y D 1.9320 Aggregation-prone
112 D D 0.0000 Buried
113 Y D 0.0000 Buried
114 E D 0.0000 Buried
115 F D 0.0000 Buried
116 A D 0.1745 Aggregation-prone
117 Y D 0.1227 Aggregation-prone
118 W D -0.5529 Soluble
119 G D 0.0000 Buried
120 Q D -1.8781 Soluble
121 G D -0.9099 Soluble
122 T D 0.0000 Buried
123 L D 0.2376 Aggregation-prone
124 V D 0.0000 Buried
125 T D -0.2652 Soluble
126 V D 0.0000 Buried
127 S D -0.5930 Soluble
128 A D -0.2393 Soluble
129 A D -0.2320 Soluble
130 S D -0.4820 Soluble
131 T D -0.5848 Soluble
132 K D -1.2271 Soluble
133 G D -1.3278 Soluble
134 P D -0.5613 Soluble
135 S D -0.2704 Soluble
136 V D 0.0000 Buried
137 F D -0.4965 Soluble
138 P D 0.0000 Buried
139 L D 0.0000 Buried
140 A D -1.1868 Soluble
141 P D -0.7875 Soluble
142 S D -0.8619 Soluble
143 G D -0.6481 Soluble
144 T D -0.4909 Soluble
145 A D 0.0000 Buried
146 A D 0.0000 Buried
147 L D 0.0000 Buried
148 G D 0.0000 Buried
149 C D 0.0000 Buried
150 L D 0.0000 Buried
151 V D 0.0000 Buried
152 K D 0.0000 Buried
153 D D -0.3200 Soluble
154 Y D 0.0000 Buried
155 F D 0.0000 Buried
156 P D 0.0000 Buried
157 E D -0.2699 Soluble
158 P D -0.4845 Soluble
159 V D -0.4995 Soluble
160 T D -0.4783 Soluble
161 V D -0.0996 Soluble
162 S D -0.3483 Soluble
163 W D 0.0000 Buried
164 N D -0.7689 Soluble
165 S D -0.6102 Soluble
166 G D -0.4869 Soluble
167 A D -0.2142 Soluble
168 L D 0.0291 Aggregation-prone
169 T D -0.1428 Soluble
170 S D -0.1663 Soluble
171 G D -0.1902 Soluble
172 V D 0.1832 Aggregation-prone
173 H D -0.2618 Soluble
174 T D 0.0293 Aggregation-prone
175 F D 0.0000 Buried
176 P D -0.1443 Soluble
177 A D 0.4099 Aggregation-prone
178 V D 0.6885 Aggregation-prone
179 L D 1.3794 Aggregation-prone
180 Q D 0.2885 Aggregation-prone
181 S D -0.0639 Soluble
182 S D -0.1927 Soluble
183 G D 0.0699 Aggregation-prone
184 L D 0.2164 Aggregation-prone
185 Y D 0.5738 Aggregation-prone
186 S D 0.0000 Buried
187 L D 0.3113 Aggregation-prone
188 S D 0.0000 Buried
189 S D 0.0000 Buried
190 V D 0.0000 Buried
191 V D 0.0000 Buried
192 T D -0.1331 Soluble
193 V D 0.0000 Buried
194 P D -0.4980 Soluble
195 S D -0.5393 Soluble
196 S D -0.6516 Soluble
197 S D -0.7006 Soluble
198 L D -0.9730 Soluble
199 G D -1.1040 Soluble
200 T D -0.8677 Soluble
201 Q D -1.5135 Soluble
202 T D -1.3151 Soluble
203 Y D 0.0000 Buried
204 I D -1.3240 Soluble
205 C D 0.0000 Buried
206 N D -1.3014 Soluble
207 V D 0.0000 Buried
208 N D -1.7570 Soluble
209 H D 0.0000 Buried
210 K D -2.3383 Soluble
211 P D -1.3557 Soluble
212 S D -1.6511 Soluble
213 N D -2.4221 Soluble
214 T D -1.9294 Soluble
215 K D -2.4939 Soluble
216 V D -1.2988 Soluble
217 D D -2.0191 Soluble
218 K D -1.9760 Soluble
219 R D -2.5551 Soluble
220 V D 0.0000 Buried
221 E D -2.9133 Soluble
222 P D -1.8886 Soluble
223 K D -2.2543 Soluble
1 D C -1.4186 Soluble
2 I C 0.0000 Buried
3 L C 0.6042 Aggregation-prone
4 L C 0.0000 Buried
5 T C -0.4003 Soluble
6 Q C 0.0000 Buried
7 S C 0.3269 Aggregation-prone
8 P C 1.1686 Aggregation-prone
9 V C 2.4216 Aggregation-prone
10 I C 2.3751 Aggregation-prone
11 L C 1.1101 Aggregation-prone
12 S C 0.0711 Aggregation-prone
13 V C 0.0000 Buried
14 S C -1.8760 Soluble
15 P C -2.1158 Soluble
16 G C -2.2378 Soluble
17 E C -2.9250 Soluble
18 R C -3.0146 Soluble
19 V C 0.0000 Buried
20 S C -0.7975 Soluble
21 F C 0.0000 Buried
22 S C -0.8907 Soluble
23 C C 0.0000 Buried
24 R C -2.5561 Soluble
25 A C 0.0000 Buried
26 S C -1.0131 Soluble
27 Q C -1.5455 Soluble
28 S C -1.5080 Soluble
29 I C 0.0000 Buried
36 G C -1.0468 Soluble
37 T C -0.7730 Soluble
38 N C -0.7812 Soluble
39 I C 0.0000 Buried
40 H C 0.0000 Buried
41 W C 0.0000 Buried
42 Y C 0.0000 Buried
43 Q C 0.0000 Buried
44 Q C -1.4998 Soluble
45 R C -2.3671 Soluble
46 T C -1.8197 Soluble
47 N C -1.9077 Soluble
48 G C -1.7100 Soluble
49 S C -1.1241 Soluble
50 P C 0.0000 Buried
51 R C -1.0510 Soluble
52 L C 0.0000 Buried
53 L C 0.0000 Buried
54 I C 0.0000 Buried
55 K C -0.7017 Soluble
56 Y C -0.5024 Soluble
57 A C 0.0000 Buried
65 S C -1.1960 Soluble
66 E C -1.9490 Soluble
67 S C -1.1673 Soluble
68 I C -0.5250 Soluble
69 S C -0.3459 Soluble
70 G C -0.4751 Soluble
71 I C -0.3015 Soluble
72 P C -0.3317 Soluble
74 S C -0.5639 Soluble
75 R C -1.0994 Soluble
76 F C 0.0000 Buried
77 S C -0.8536 Soluble
78 G C -0.7187 Soluble
79 S C -0.8468 Soluble
80 G C -1.1261 Soluble
83 S C -0.9569 Soluble
84 G C -1.3395 Soluble
85 T C -1.9734 Soluble
86 D C -2.7127 Soluble
87 F C 0.0000 Buried
88 T C -0.9350 Soluble
89 L C 0.0000 Buried
90 S C -0.8827 Soluble
91 I C 0.0000 Buried
92 N C -2.2179 Soluble
93 S C -2.2564 Soluble
94 V C 0.0000 Buried
95 E C -2.9811 Soluble
96 S C -2.7245 Soluble
97 E C -2.7895 Soluble
98 D C 0.0000 Buried
99 I C 0.0000 Buried
100 A C 0.0000 Buried
101 D C -0.5845 Soluble
102 Y C 0.0000 Buried
103 Y C 0.0000 Buried
104 C C 0.0000 Buried
105 Q C 0.0000 Buried
106 Q C 0.0000 Buried
107 N C -0.6421 Soluble
108 N C -1.1373 Soluble
109 N C -0.8243 Soluble
114 W C 0.1828 Aggregation-prone
115 P C -0.1776 Soluble
116 T C 0.0000 Buried
117 T C 0.0178 Aggregation-prone
118 F C 0.2047 Aggregation-prone
119 G C 0.0000 Buried
120 A C 0.1111 Aggregation-prone
121 G C 0.3453 Aggregation-prone
122 T C 0.0000 Buried
123 K C 0.5679 Aggregation-prone
124 L C 0.0000 Buried
125 E C -0.7034 Soluble
126 L C 0.0000 Buried
127 K C -1.6006 Soluble
128 R C -1.1701 Soluble
129 T C 0.1473 Aggregation-prone
130 V C 0.9829 Aggregation-prone
131 A C 0.4439 Aggregation-prone
132 A C 0.0699 Aggregation-prone
133 P C 0.0000 Buried
134 S C -0.1719 Soluble
135 V C 0.0000 Buried
136 F C -0.0429 Soluble
137 I C 0.0000 Buried
138 F C 0.0000 Buried
139 P C -0.5566 Soluble
140 P C -0.6623 Soluble
141 S C -1.4991 Soluble
142 D C -2.4840 Soluble
143 E C -2.0561 Soluble
144 Q C 0.0000 Buried
145 L C -2.0068 Soluble
146 K C -2.4974 Soluble
147 S C -1.5332 Soluble
148 G C -1.1512 Soluble
149 T C -0.8327 Soluble
150 A C 0.0000 Buried
151 S C 0.0000 Buried
152 V C 0.0000 Buried
153 V C 0.0000 Buried
154 C C 0.0000 Buried
155 L C 0.0000 Buried
156 L C 0.0000 Buried
157 N C 0.0000 Buried
158 N C -0.9940 Soluble
159 F C 0.0000 Buried
160 Y C 0.0000 Buried
161 P C -1.6405 Soluble
162 R C -2.8626 Soluble
163 E C -3.2546 Soluble
164 A C -2.4070 Soluble
165 K C -2.4315 Soluble
166 V C -1.2049 Soluble
167 Q C -0.8773 Soluble
168 W C 0.0000 Buried
169 K C -0.8596 Soluble
170 V C 0.0000 Buried
171 D C -2.0207 Soluble
172 N C -1.6904 Soluble
173 A C -0.4860 Soluble
174 L C 0.2664 Aggregation-prone
175 Q C -0.3146 Soluble
176 S C -0.4926 Soluble
177 G C -0.9357 Soluble
178 N C -0.8896 Soluble
179 S C -1.1575 Soluble
180 Q C -1.3400 Soluble
181 E C -1.3927 Soluble
182 S C -0.5989 Soluble
183 V C -0.7163 Soluble
184 T C -0.9244 Soluble
185 E C -1.8306 Soluble
186 Q C 0.0000 Buried
187 D C -1.9523 Soluble
188 S C -2.5200 Soluble
189 K C -2.8384 Soluble
190 D C -2.0401 Soluble
191 S C 0.0000 Buried
192 T C 0.0000 Buried
193 Y C 0.0000 Buried
194 S C 0.0000 Buried
195 L C 0.0000 Buried
196 S C 0.0000 Buried
197 S C 0.0000 Buried
198 T C -0.5786 Soluble
199 L C 0.0000 Buried
200 T C -0.4891 Soluble
201 L C -0.6856 Soluble
202 S C -1.0590 Soluble
203 K C -2.0766 Soluble
204 A C -1.9196 Soluble
205 D C -2.5211 Soluble
206 Y C 0.0000 Buried
207 E C -3.7050 Soluble
208 K C -3.7028 Soluble
209 H C -3.2041 Soluble
210 K C -3.1120 Soluble
211 V C -1.4428 Soluble
212 Y C 0.0000 Buried
213 A C 0.0000 Buried
214 C C 0.0000 Buried
215 E C -1.0320 Soluble
216 V C 0.0000 Buried
217 T C -1.2630 Soluble
218 H C 0.0000 Buried
219 Q C -1.6438 Soluble
220 G C -0.1890 Soluble
221 L C -0.0770 Soluble
222 S C -0.4026 Soluble
223 S C -0.3874 Soluble
224 P C -0.5242 Soluble
225 V C -0.0003 Soluble
226 T C -0.5628 Soluble
227 K C -0.8102 Soluble
228 S C -0.6549 Soluble
229 F C -0.7004 Soluble
230 N C -1.4525 Soluble
231 R C -2.1209 Soluble
232 G C -1.3222 Soluble
233 A C -0.6767 Soluble

3D Structure — colored by A4D score

Sequence - click residue to focus in viewer  |  colored by A4D score
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Color Legend (B-factor = A4D Score)
Score > 1.5 — highly aggregation-prone
Score 0.5–1.5 — aggregation-prone
Score ≈ 0 — buried
Score −1 to −0.5 — soluble
Score < −2.5 — highly soluble
pH Structure
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A4D Score Threshold
Highlight residues > threshold in the sequence panel
CDR Regions
HCDR1
HCDR2
HCDR3
LCDR1
LCDR2
LCDR3
Display Options

pH-Dependent Aggregation Profiles

A4D scores calculated across 11 pH conditions (4.0–9.0, step 0.5). Click a row to view the structure at that pH. The input structure is globular — max score is recommended for pH analysis.

pH Avg A4D Score Max A4D Score Downloads
4.0 -0.6809 3.0932 CSV PDB
4.5 -0.7154 3.0744 CSV PDB
5.0 -0.7567 3.0473 CSV PDB
5.5 -0.7968 3.0166 CSV PDB
6.0 -0.826 2.988 CSV PDB
6.5 -0.8359 2.9677 CSV PDB
7.0 -0.8255 2.9591 CSV PDB
7.5 -0.8011 2.9602 CSV PDB
8.0 -0.7689 2.9666 CSV PDB
8.5 -0.7312 2.9757 CSV PDB
9.0 -0.6888 2.9872 CSV PDB
Average A4D Score vs pH
Max A4D Score vs pH