Zemocimig / 8gv0

A4DAB305_8gv0_A_B | Source PDB: 8gv0 | Chains: A, B | Done
100
Yes
10 Å
Yes
Avg A4D Score
-0.8531
Max Score
1.3229
Min Score
-3.6934
Total Score
-371.95
Score CDR
-0.9663
Score non-CDR
-0.8388

Calculation Parameters

Chain Sequence(s) QVQLVESGGGLVQPGGSLRLSCAASGFTFSYYDIQWVRQAPGKGLEWVSSISPSGQSTYYRREVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARRTGREEGGWIFDYWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYTCNVDHKPSNTKVDKRVESEIVLTQSPATLSVSPGERATLSCRASRSVRRELAWYQQKPGQAPELLIYGASTRETGIPARFSGSGSGTDFTLTINSLEAEDAATYYCQQYRDPPGTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC input.pdb
Selected Chain(s) A (Heavy), B (Light)
Distance of Aggregation 10 Å
FoldX Energy Minimization Yes
pH Calculations Yes
Downloads Download all data (.tar.gz)

Aggrescan4D Profile

Aggregation-prone (score > 0)
Soluble (score < 0)
Buried (score = 0)

Per-Residue A4D Scores

Download CSV
Minimum Score -3.6934
Maximum Score 1.3229
Average Score -0.8531
Total Score -371.9534

Residues with A4D score > 0.0 are highlighted as aggregation-prone.

Index Residue Chain A4D Score Classification
1 Q A -1.5714 Soluble
2 V A -1.0209 Soluble
3 Q A -1.4622 Soluble
4 L A 0.0000 Buried
5 V A -0.2459 Soluble
6 E A 0.0000 Buried
7 S A -0.6353 Soluble
8 G A -0.8386 Soluble
9 G A -0.7602 Soluble
11 G A -0.3868 Soluble
12 L A -0.1757 Soluble
13 V A -0.4554 Soluble
14 Q A -1.5322 Soluble
15 P A -1.6962 Soluble
16 G A -1.5515 Soluble
17 G A -1.1737 Soluble
18 S A -1.5065 Soluble
19 L A -1.2752 Soluble
20 R A -2.3342 Soluble
21 L A 0.0000 Buried
22 S A -0.6374 Soluble
23 C A 0.0000 Buried
24 A A -0.4613 Soluble
25 A A 0.0000 Buried
26 S A -1.1322 Soluble
27 G A -1.1522 Soluble
28 F A -0.3191 Soluble
29 T A 0.1182 Aggregation-prone
30 F A 0.0000 Buried
35 S A -0.0099 Soluble
36 Y A 1.1092 Aggregation-prone
37 Y A 0.3044 Aggregation-prone
38 D A -0.0202 Soluble
39 I A 0.0000 Buried
40 Q A 0.0000 Buried
41 W A 0.0000 Buried
42 V A 0.0000 Buried
43 R A 0.0000 Buried
44 Q A -0.6099 Soluble
45 A A 0.0000 Buried
46 P A -1.1140 Soluble
47 G A -1.5069 Soluble
48 K A -2.2230 Soluble
49 G A -1.3155 Soluble
50 L A 0.0000 Buried
51 E A -0.7094 Soluble
52 W A 0.0000 Buried
53 V A 0.0000 Buried
54 S A 0.0000 Buried
55 S A 0.0000 Buried
56 I A 0.0000 Buried
57 S A -0.2881 Soluble
58 P A -0.2474 Soluble
59 S A -0.7075 Soluble
62 G A -1.1610 Soluble
63 Q A -1.4267 Soluble
64 S A -0.5782 Soluble
65 T A 0.1139 Aggregation-prone
66 Y A 0.5054 Aggregation-prone
67 Y A -0.6993 Soluble
68 R A -1.7706 Soluble
69 R A -2.8646 Soluble
70 E A -2.1364 Soluble
71 V A 0.0000 Buried
72 K A -2.5967 Soluble
74 G A -1.9236 Soluble
75 R A -1.8032 Soluble
76 F A 0.0000 Buried
77 T A -0.9409 Soluble
78 I A 0.0000 Buried
79 S A -0.5258 Soluble
80 R A -1.1063 Soluble
81 D A -1.5509 Soluble
82 N A -1.7303 Soluble
83 S A -1.6784 Soluble
84 K A -2.4230 Soluble
85 N A -1.8785 Soluble
86 T A -1.1115 Soluble
87 L A 0.0000 Buried
88 Y A -0.5307 Soluble
89 L A 0.0000 Buried
90 Q A -1.7223 Soluble
91 M A 0.0000 Buried
92 N A -2.0766 Soluble
93 S A -1.5194 Soluble
94 L A 0.0000 Buried
95 R A -2.5339 Soluble
96 A A -1.8279 Soluble
97 E A -2.2980 Soluble
98 D A 0.0000 Buried
99 T A -0.6966 Soluble
100 A A 0.0000 Buried
101 V A 0.1387 Aggregation-prone
102 Y A 0.0000 Buried
103 Y A 0.0000 Buried
104 C A 0.0000 Buried
105 A A 0.0000 Buried
106 R A 0.0881 Aggregation-prone
107 R A 0.0000 Buried
108 T A -1.0222 Soluble
109 G A -1.8616 Soluble
110 R A -3.3849 Soluble
111 E A -3.6823 Soluble
111A E A -3.4558 Soluble
112A G A -2.4165 Soluble
112 G A -1.7923 Soluble
113 W A -0.9165 Soluble
114 I A 0.0000 Buried
115 F A 0.0000 Buried
116 D A -0.3197 Soluble
117 Y A -0.2309 Soluble
118 W A 0.0000 Buried
119 G A 0.0000 Buried
120 Q A -1.4026 Soluble
121 G A -0.7169 Soluble
122 T A -0.2897 Soluble
123 L A -0.0038 Soluble
124 V A 0.0000 Buried
125 T A -0.6107 Soluble
126 V A 0.0000 Buried
127 S A -0.8829 Soluble
128 S A -0.6453 Soluble
129 A A -0.5516 Soluble
130 S A -0.7170 Soluble
131 T A -0.9346 Soluble
132 K A -1.6798 Soluble
133 G A -1.7247 Soluble
134 P A 0.0000 Buried
135 S A -0.5483 Soluble
136 V A 0.0000 Buried
137 F A 0.0000 Buried
138 P A -1.1033 Soluble
139 L A 0.0000 Buried
140 A A -0.5129 Soluble
141 P A -0.3378 Soluble
142 C A -0.7861 Soluble
143 S A -1.1817 Soluble
144 R A -1.8772 Soluble
145 S A -1.4778 Soluble
146 T A -1.4974 Soluble
147 S A -1.5242 Soluble
148 E A -2.1377 Soluble
149 S A -1.3014 Soluble
150 T A -0.8493 Soluble
151 A A 0.0000 Buried
152 A A 0.0000 Buried
153 L A 0.0669 Aggregation-prone
154 G A 0.0000 Buried
155 C A 0.0000 Buried
156 L A 0.0000 Buried
157 V A 0.0000 Buried
158 K A -0.3019 Soluble
159 D A -0.5040 Soluble
160 Y A 0.0000 Buried
161 F A -0.6680 Soluble
162 P A 0.0000 Buried
163 E A -0.9113 Soluble
164 P A -0.8384 Soluble
165 V A -0.7776 Soluble
166 T A -0.6335 Soluble
167 V A -0.1255 Soluble
168 S A -0.3671 Soluble
169 W A 0.0000 Buried
170 N A -1.0150 Soluble
171 S A -0.7081 Soluble
172 G A -0.5618 Soluble
173 A A -0.2248 Soluble
174 L A -0.1039 Soluble
175 T A -0.0944 Soluble
176 S A -0.2907 Soluble
177 G A -0.0210 Soluble
178 V A 0.2898 Aggregation-prone
179 H A -0.1211 Soluble
180 T A 0.0350 Aggregation-prone
181 F A 0.0000 Buried
182 P A -0.3309 Soluble
183 A A 0.2797 Aggregation-prone
184 V A 0.4184 Aggregation-prone
185 L A 1.2154 Aggregation-prone
186 Q A 0.1553 Aggregation-prone
187 S A -0.3590 Soluble
188 S A -0.3212 Soluble
189 G A -0.1218 Soluble
190 L A -0.1579 Soluble
191 Y A 0.1993 Aggregation-prone
192 S A 0.1860 Aggregation-prone
193 L A 0.0000 Buried
194 S A 0.0000 Buried
195 S A 0.0000 Buried
196 V A 0.0000 Buried
197 V A 0.0000 Buried
198 T A 0.0567 Aggregation-prone
199 V A 0.0550 Aggregation-prone
200 P A -0.4102 Soluble
201 S A -0.9739 Soluble
202 S A -0.6871 Soluble
203 S A -0.2214 Soluble
204 L A -0.3362 Soluble
205 G A -0.6708 Soluble
206 T A -0.6089 Soluble
207 Q A -0.9767 Soluble
208 T A -1.2353 Soluble
209 Y A 0.0000 Buried
210 T A -1.9284 Soluble
211 C A 0.0000 Buried
212 N A -1.5946 Soluble
213 V A 0.0000 Buried
214 D A -1.7948 Soluble
215 H A 0.0000 Buried
216 K A -2.7621 Soluble
217 P A -1.7662 Soluble
218 S A -1.9107 Soluble
219 N A -2.3805 Soluble
220 T A -1.9643 Soluble
221 K A -2.6232 Soluble
222 V A -1.3554 Soluble
223 D A -2.6275 Soluble
224 K A -2.3061 Soluble
225 R A -2.9421 Soluble
226 V A -1.9302 Soluble
227 E A -2.3787 Soluble
228 S A -1.4443 Soluble
1 E B -1.9468 Soluble
2 I B 0.0000 Buried
3 V B 0.5846 Aggregation-prone
4 L B 0.0000 Buried
5 T B -0.5544 Soluble
6 Q B -0.9266 Soluble
7 S B -0.7584 Soluble
8 P B -0.4016 Soluble
9 A B -0.2898 Soluble
10 T B -0.1224 Soluble
11 L B -0.1714 Soluble
12 S B -0.5566 Soluble
13 V B -1.5587 Soluble
14 S B -2.0952 Soluble
15 P B -2.3621 Soluble
16 G B -2.4502 Soluble
17 E B -3.6934 Soluble
18 R B -3.5030 Soluble
19 A B 0.0000 Buried
20 T B -0.8944 Soluble
21 L B 0.0000 Buried
22 S B -0.9822 Soluble
23 C B 0.0000 Buried
24 R B -2.5668 Soluble
25 A B 0.0000 Buried
26 S B -1.2659 Soluble
27 R B -2.6223 Soluble
28 S B -2.6570 Soluble
29 V B 0.0000 Buried
36 R B -3.6664 Soluble
37 R B -3.4425 Soluble
38 E B -2.3583 Soluble
39 L B 0.0000 Buried
40 A B 0.0000 Buried
41 W B 0.0000 Buried
42 Y B 0.0000 Buried
43 Q B -1.0626 Soluble
44 Q B 0.0000 Buried
45 K B -1.8138 Soluble
46 P B -1.4898 Soluble
47 G B -1.6160 Soluble
48 Q B -2.1566 Soluble
49 A B 0.0000 Buried
50 P B 0.0000 Buried
51 E B -1.9842 Soluble
52 L B 0.0000 Buried
53 L B 0.0000 Buried
54 I B 0.0000 Buried
55 Y B -0.4106 Soluble
56 G B -1.3384 Soluble
57 A B 0.0000 Buried
65 S B -0.9238 Soluble
66 T B -0.8117 Soluble
67 R B -1.6823 Soluble
68 E B -1.1842 Soluble
69 T B -0.8059 Soluble
70 G B -0.7027 Soluble
71 I B -0.7494 Soluble
72 P B -0.6235 Soluble
74 A B -0.8495 Soluble
75 R B -1.5834 Soluble
76 F B 0.0000 Buried
77 S B -0.8277 Soluble
78 G B 0.0000 Buried
79 S B -0.9125 Soluble
80 G B -1.8499 Soluble
83 S B -2.5244 Soluble
84 G B -2.8453 Soluble
85 T B -2.7011 Soluble
86 D B -2.8944 Soluble
87 F B 0.0000 Buried
88 T B -0.8331 Soluble
89 L B 0.0000 Buried
90 T B -0.9440 Soluble
91 I B 0.0000 Buried
92 N B -2.9072 Soluble
93 S B -2.5996 Soluble
94 L B 0.0000 Buried
95 E B -2.4852 Soluble
96 A B -2.5354 Soluble
97 E B -2.7823 Soluble
98 D B 0.0000 Buried
99 A B 0.0000 Buried
100 A B 0.0000 Buried
101 T B -0.3833 Soluble
102 Y B 0.0000 Buried
103 Y B 0.0000 Buried
104 C B 0.0000 Buried
105 Q B 0.0000 Buried
106 Q B 0.0000 Buried
107 Y B 0.0000 Buried
108 R B -2.5747 Soluble
109 D B -1.7332 Soluble
114 P B -0.9113 Soluble
115 P B -0.9262 Soluble
116 G B -0.5900 Soluble
117 T B -0.3459 Soluble
118 F B 0.0000 Buried
119 G B 0.0000 Buried
120 G B -1.0942 Soluble
121 G B -0.8509 Soluble
122 T B 0.0000 Buried
123 K B -0.3810 Soluble
124 V B 0.0000 Buried
125 E B 0.0000 Buried
126 I B 0.0000 Buried
127 K B -2.2129 Soluble
128 R B -1.4000 Soluble
129 T B -0.3471 Soluble
130 V B -0.0682 Soluble
131 A B -0.0800 Soluble
132 A B -0.2561 Soluble
133 P B 0.0000 Buried
134 S B -0.0922 Soluble
135 V B 0.0847 Aggregation-prone
136 F B 0.0000 Buried
137 I B 0.0000 Buried
138 F B 0.0000 Buried
139 P B -0.4040 Soluble
140 P B -0.7082 Soluble
141 S B -1.4416 Soluble
142 D B -2.7290 Soluble
143 E B -2.5729 Soluble
144 Q B 0.0000 Buried
145 L B -1.8786 Soluble
146 K B -2.6697 Soluble
147 S B -1.6328 Soluble
148 G B -1.3421 Soluble
149 T B -0.8511 Soluble
150 A B 0.0000 Buried
151 S B 0.0000 Buried
152 V B 0.0000 Buried
153 V B 0.0000 Buried
154 C B 0.0000 Buried
155 L B 0.0000 Buried
156 L B 0.0000 Buried
157 N B 0.0000 Buried
158 N B -0.8625 Soluble
159 F B 0.0000 Buried
160 Y B 0.0000 Buried
161 P B -2.0202 Soluble
162 R B -3.1012 Soluble
163 E B -3.2514 Soluble
164 A B -2.4252 Soluble
165 K B -2.3979 Soluble
166 V B -1.2139 Soluble
167 Q B -0.9013 Soluble
168 W B 0.0000 Buried
169 K B -0.9504 Soluble
170 V B 0.0000 Buried
171 D B -1.7463 Soluble
172 N B -1.6082 Soluble
173 A B -0.4887 Soluble
174 L B -0.0045 Soluble
175 Q B -0.5076 Soluble
176 S B -0.5898 Soluble
177 G B -0.9176 Soluble
178 N B -1.3244 Soluble
179 S B -1.3480 Soluble
180 Q B -1.5698 Soluble
181 E B -1.7859 Soluble
182 S B 0.0000 Buried
183 V B -0.5113 Soluble
184 T B -1.0741 Soluble
185 E B -2.2282 Soluble
186 Q B 0.0000 Buried
187 D B -2.2764 Soluble
188 S B -2.5780 Soluble
189 K B -2.8938 Soluble
190 D B -2.7209 Soluble
191 S B -2.4131 Soluble
192 T B 0.0000 Buried
193 Y B 0.0000 Buried
194 S B 0.0000 Buried
195 L B 0.0000 Buried
196 S B 0.0000 Buried
197 S B 0.0000 Buried
198 T B -0.7439 Soluble
199 L B 0.0000 Buried
200 T B -0.3750 Soluble
201 L B -0.6235 Soluble
202 S B -0.9807 Soluble
203 K B -2.0683 Soluble
204 A B -1.7313 Soluble
205 D B -2.2364 Soluble
206 Y B 0.0000 Buried
207 E B -3.6767 Soluble
208 K B -3.5869 Soluble
209 H B -2.9686 Soluble
210 K B -3.4862 Soluble
211 V B -1.5359 Soluble
212 Y B 0.0000 Buried
213 A B 0.0000 Buried
214 C B 0.0000 Buried
215 E B -0.6717 Soluble
216 V B 0.0000 Buried
217 T B -0.9670 Soluble
218 H B -1.4005 Soluble
219 Q B -1.5265 Soluble
220 G B -0.7219 Soluble
221 L B -0.1653 Soluble
222 S B -0.2960 Soluble
223 S B -0.0643 Soluble
224 P B 0.1266 Aggregation-prone
225 V B 1.3229 Aggregation-prone
226 T B 0.0118 Aggregation-prone
227 K B -0.7868 Soluble
228 S B -0.8071 Soluble
229 F B 0.0000 Buried
230 N B -2.1283 Soluble
231 R B -3.0117 Soluble
232 G B -2.2977 Soluble
233 E B -2.3525 Soluble
234 C B -0.7909 Soluble

3D Structure — colored by A4D score

Sequence - click residue to focus in viewer  |  colored by A4D score
Load structure to view sequence…
Color Legend (B-factor = A4D Score)
Score > 1.5 — highly aggregation-prone
Score 0.5–1.5 — aggregation-prone
Score ≈ 0 — buried
Score −1 to −0.5 — soluble
Score < −2.5 — highly soluble
pH Structure
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A4D Score Threshold
Highlight residues > threshold in the sequence panel
CDR Regions
HCDR1
HCDR2
HCDR3
LCDR1
LCDR2
LCDR3
Display Options

pH-Dependent Aggregation Profiles

A4D scores calculated across 11 pH conditions (4.0–9.0, step 0.5). Click a row to view the structure at that pH. The input structure is globular — max score is recommended for pH analysis.

pH Avg A4D Score Max A4D Score Downloads
4.0 -0.8979 1.8561 CSV PDB
4.5 -0.9444 1.785 CSV PDB
5.0 -1.0022 1.6971 CSV PDB
5.5 -1.0602 1.6026 CSV PDB
6.0 -1.1057 1.5211 CSV PDB
6.5 -1.128 1.4958 CSV PDB
7.0 -1.1254 1.4797 CSV PDB
7.5 -1.1053 1.4696 CSV PDB
8.0 -1.0759 1.5223 CSV PDB
8.5 -1.0405 1.5878 CSV PDB
9.0 -1.0002 1.6534 CSV PDB
Average A4D Score vs pH
Max A4D Score vs pH