Vislarafusp / 8q6j

A4DAB295_8q6j_B_A | Source PDB: 8q6j | Chains: B, A | Done
99.12
Yes
10 Å
Yes
Avg A4D Score
-0.7468
Max Score
2.165
Min Score
-3.7676
Total Score
-324.1
Score CDR
-0.6281
Score non-CDR
-0.7612

Calculation Parameters

Chain Sequence(s) EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPDIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC input.pdb
Selected Chain(s) B (Heavy), A (Light)
Distance of Aggregation 10 Å
FoldX Energy Minimization Yes
pH Calculations Yes
Downloads Download all data (.tar.gz)

Aggrescan4D Profile

Aggregation-prone (score > 0)
Soluble (score < 0)
Buried (score = 0)

Per-Residue A4D Scores

Download CSV
Minimum Score -3.7676
Maximum Score 2.165
Average Score -0.7468
Total Score -324.0955

Residues with A4D score > 0.0 are highlighted as aggregation-prone.

Index Residue Chain A4D Score Classification
1 E B -2.2365 Soluble
2 V B -1.4815 Soluble
3 Q B -1.3465 Soluble
4 L B 0.0000 Buried
5 V B 1.1902 Aggregation-prone
6 E B 0.0000 Buried
7 S B -0.1477 Soluble
8 G B -0.6025 Soluble
9 G B -0.1075 Soluble
11 G B -0.0614 Soluble
12 L B -0.0114 Soluble
13 V B -0.5336 Soluble
14 Q B -1.5580 Soluble
15 P B -1.7090 Soluble
16 G B -1.3839 Soluble
17 G B -1.1082 Soluble
18 S B -1.0481 Soluble
19 L B -0.9494 Soluble
20 R B -1.7043 Soluble
21 L B 0.0000 Buried
22 S B -0.1913 Soluble
23 C B 0.0000 Buried
24 A B 0.0957 Aggregation-prone
25 A B -0.6508 Soluble
26 S B -0.9949 Soluble
27 G B -1.6368 Soluble
28 F B -1.4362 Soluble
29 N B -1.9955 Soluble
30 I B 0.0000 Buried
35 K B -2.8162 Soluble
36 D B -2.8970 Soluble
37 T B 0.0000 Buried
38 Y B -0.2300 Soluble
39 I B 0.0000 Buried
40 H B 0.0000 Buried
41 W B 0.0000 Buried
42 V B 0.0000 Buried
43 R B -0.3429 Soluble
44 Q B -0.7306 Soluble
45 A B -1.2745 Soluble
46 P B -1.2891 Soluble
47 G B -1.4557 Soluble
48 K B -2.4112 Soluble
49 G B -1.7115 Soluble
50 L B 0.0000 Buried
51 E B -0.9305 Soluble
52 W B 0.0000 Buried
53 V B 0.0000 Buried
54 A B 0.0000 Buried
55 R B -0.3969 Soluble
56 I B 0.0000 Buried
57 Y B -0.3232 Soluble
58 P B 0.0000 Buried
59 T B -1.3651 Soluble
62 N B -1.1288 Soluble
63 G B -0.3938 Soluble
64 Y B 0.5488 Aggregation-prone
65 T B -0.2251 Soluble
66 R B -1.4039 Soluble
67 Y B -1.5918 Soluble
68 A B -1.7776 Soluble
69 D B -2.6727 Soluble
70 S B -1.7017 Soluble
71 V B 0.0000 Buried
72 K B -2.8154 Soluble
74 G B -1.7612 Soluble
75 R B -1.2457 Soluble
76 F B 0.0000 Buried
77 T B -0.9285 Soluble
78 I B 0.0000 Buried
79 S B -0.1411 Soluble
80 A B -0.5787 Soluble
81 D B -1.3254 Soluble
82 T B -1.8886 Soluble
83 S B -1.5401 Soluble
84 K B -2.0184 Soluble
85 N B -1.6946 Soluble
86 T B 0.0000 Buried
87 A B 0.0000 Buried
88 Y B -0.4513 Soluble
89 L B 0.0000 Buried
90 Q B -1.1094 Soluble
91 M B 0.0000 Buried
92 N B -1.2832 Soluble
93 S B -1.2460 Soluble
94 L B 0.0000 Buried
95 R B -2.3488 Soluble
96 A B -1.8214 Soluble
97 E B -2.2863 Soluble
98 D B 0.0000 Buried
99 T B -0.7019 Soluble
100 A B 0.0000 Buried
101 V B -0.0302 Soluble
102 Y B 0.0000 Buried
103 Y B 0.0000 Buried
104 C B 0.0000 Buried
105 S B 0.0000 Buried
106 R B 0.0159 Aggregation-prone
107 W B 0.0000 Buried
108 G B -0.6542 Soluble
109 G B -1.5484 Soluble
110 D B -2.0767 Soluble
111 G B -1.0542 Soluble
112 F B -0.1986 Soluble
113 Y B 0.2624 Aggregation-prone
114 A B 0.0000 Buried
115 M B 0.0000 Buried
116 D B -0.0133 Soluble
117 Y B -0.1267 Soluble
118 W B -0.2211 Soluble
119 G B 0.0000 Buried
120 Q B -1.2874 Soluble
121 G B -0.5584 Soluble
122 T B 0.0000 Buried
123 L B 0.5685 Aggregation-prone
124 V B 0.0000 Buried
125 T B 0.0000 Buried
126 V B 0.0000 Buried
127 S B -0.9537 Soluble
128 S B -0.7347 Soluble
129 A B -0.5010 Soluble
130 S B -0.5370 Soluble
131 T B -1.1154 Soluble
132 K B -1.5640 Soluble
133 G B -1.6796 Soluble
134 P B 0.0000 Buried
135 S B -0.5072 Soluble
136 V B -0.5789 Soluble
137 F B 0.0000 Buried
138 P B -1.1866 Soluble
139 L B 0.0000 Buried
140 A B -0.7754 Soluble
141 P B -0.6918 Soluble
142 S B -0.7021 Soluble
143 S B -0.9682 Soluble
144 K B -1.7143 Soluble
145 S B 0.0000 Buried
146 T B -0.8823 Soluble
147 S B -0.7718 Soluble
148 G B -0.8399 Soluble
149 G B -0.9314 Soluble
150 T B -0.6430 Soluble
151 A B -0.5783 Soluble
152 A B 0.0000 Buried
153 L B 0.0000 Buried
154 G B 0.0000 Buried
155 C B 0.0000 Buried
156 L B 0.0000 Buried
157 V B 0.0000 Buried
158 K B 0.0000 Buried
159 D B -0.7066 Soluble
160 Y B 0.0000 Buried
161 F B 0.0000 Buried
162 P B 0.0000 Buried
163 E B -0.6047 Soluble
164 P B -0.7721 Soluble
165 V B 0.0000 Buried
166 T B -0.7036 Soluble
167 V B -0.5797 Soluble
168 S B -0.5433 Soluble
169 W B 0.0000 Buried
170 N B -1.0333 Soluble
171 S B -0.7835 Soluble
172 G B -0.5519 Soluble
173 A B -0.1318 Soluble
174 L B 0.5381 Aggregation-prone
175 T B 0.1628 Aggregation-prone
176 S B 0.0986 Aggregation-prone
177 G B -0.0077 Soluble
178 V B 0.4445 Aggregation-prone
179 H B -0.1878 Soluble
180 T B -0.0697 Soluble
181 F B 0.0000 Buried
182 P B -0.0864 Soluble
183 A B 0.2987 Aggregation-prone
184 V B 0.4483 Aggregation-prone
185 L B 1.0138 Aggregation-prone
186 Q B 0.1054 Aggregation-prone
187 S B -0.1375 Soluble
188 S B -0.2005 Soluble
189 G B 0.0198 Aggregation-prone
190 L B 0.0449 Aggregation-prone
191 Y B 0.2497 Aggregation-prone
192 S B 0.0000 Buried
193 L B 0.0000 Buried
194 S B 0.0000 Buried
195 S B 0.0000 Buried
196 V B 0.0000 Buried
197 V B 0.0000 Buried
198 T B -0.2124 Soluble
199 V B 0.0000 Buried
200 P B -0.6307 Soluble
201 S B -0.7257 Soluble
202 S B -0.6370 Soluble
203 S B -0.5865 Soluble
204 L B -0.8037 Soluble
205 G B -1.1012 Soluble
206 T B -0.8282 Soluble
207 Q B -1.4451 Soluble
208 T B -1.5255 Soluble
209 Y B -1.0072 Soluble
210 I B -1.3320 Soluble
211 C B 0.0000 Buried
212 N B -1.9281 Soluble
213 V B 0.0000 Buried
214 N B -2.0319 Soluble
215 H B 0.0000 Buried
216 K B -2.7944 Soluble
217 P B -1.6376 Soluble
218 S B -1.9647 Soluble
219 N B -2.6984 Soluble
220 T B -2.3323 Soluble
221 K B -2.7541 Soluble
222 V B -1.8128 Soluble
223 D B -2.7130 Soluble
224 K B -2.3972 Soluble
225 K B -2.6795 Soluble
226 V B 0.0000 Buried
227 E B -2.5609 Soluble
228 P B -1.3673 Soluble
1 D A -2.0415 Soluble
2 I A -1.7455 Soluble
3 Q A -2.0790 Soluble
4 M A 0.0000 Buried
5 T A -1.2952 Soluble
6 Q A -1.1532 Soluble
7 S A -0.7229 Soluble
8 P A -0.6163 Soluble
9 S A -0.7409 Soluble
10 S A -0.4235 Soluble
11 L A -0.3853 Soluble
12 S A -1.0601 Soluble
13 A A -1.1796 Soluble
14 S A -0.8266 Soluble
15 V A 0.4097 Aggregation-prone
16 G A -0.6209 Soluble
17 D A -1.6661 Soluble
18 R A -2.2794 Soluble
19 V A 0.0000 Buried
20 T A -0.6233 Soluble
21 I A 0.0000 Buried
22 T A -0.6386 Soluble
23 C A 0.0000 Buried
24 R A -2.4656 Soluble
25 A A -2.2665 Soluble
26 S A -2.0874 Soluble
27 Q A -2.7723 Soluble
28 D A -2.8900 Soluble
29 V A 0.0000 Buried
36 N A -2.1261 Soluble
37 T A -1.2688 Soluble
38 A A -0.3569 Soluble
39 V A 0.0000 Buried
40 A A 0.0000 Buried
41 W A 0.0000 Buried
42 Y A 0.0000 Buried
43 Q A -0.8325 Soluble
44 Q A 0.0000 Buried
45 K A -1.6900 Soluble
46 P A -1.3577 Soluble
47 G A -1.6109 Soluble
48 K A -2.4738 Soluble
49 A A -1.5507 Soluble
50 P A 0.0000 Buried
51 K A -1.2708 Soluble
52 L A 0.0000 Buried
53 L A 0.0000 Buried
54 I A 0.0000 Buried
55 Y A 1.0855 Aggregation-prone
56 S A 0.5203 Aggregation-prone
57 A A 0.0000 Buried
65 S A 0.4856 Aggregation-prone
66 F A 2.1650 Aggregation-prone
67 L A 1.4736 Aggregation-prone
68 Y A 0.9472 Aggregation-prone
69 S A 0.1415 Aggregation-prone
70 G A -0.3436 Soluble
71 V A -0.0003 Soluble
72 P A -0.2568 Soluble
74 S A -0.3131 Soluble
75 R A -0.7147 Soluble
76 F A 0.0000 Buried
77 S A 0.0392 Aggregation-prone
78 G A -0.3080 Soluble
79 S A -1.1696 Soluble
80 R A -2.5138 Soluble
83 S A -1.8474 Soluble
84 G A -1.8789 Soluble
85 T A -2.3125 Soluble
86 D A -2.0055 Soluble
87 F A 0.0000 Buried
88 T A -0.9578 Soluble
89 L A 0.0000 Buried
90 T A -0.7645 Soluble
91 I A 0.0000 Buried
92 S A -1.1950 Soluble
93 S A -0.9142 Soluble
94 L A 0.0000 Buried
95 Q A -1.0619 Soluble
96 P A -1.6632 Soluble
97 E A -2.4449 Soluble
98 D A 0.0000 Buried
99 F A 0.0000 Buried
100 A A 0.0000 Buried
101 T A -0.6517 Soluble
102 Y A 0.0000 Buried
103 Y A 0.0000 Buried
104 C A 0.0000 Buried
105 Q A 0.0000 Buried
106 Q A 0.0000 Buried
107 H A 0.0189 Aggregation-prone
108 Y A -0.0233 Soluble
109 T A -0.0202 Soluble
114 T A -0.3941 Soluble
115 P A -0.7793 Soluble
116 P A 0.0000 Buried
117 T A -0.6227 Soluble
118 F A 0.0000 Buried
119 G A -1.3610 Soluble
120 Q A -1.7860 Soluble
121 G A 0.0000 Buried
122 T A 0.0000 Buried
123 K A -0.8877 Soluble
124 V A 0.0000 Buried
125 E A -1.0273 Soluble
126 I A 0.0000 Buried
127 K A -1.7368 Soluble
128 R A -1.3303 Soluble
129 T A -0.1055 Soluble
130 V A 0.9314 Aggregation-prone
131 A A 0.2250 Aggregation-prone
132 A A 0.2303 Aggregation-prone
133 P A -0.0664 Soluble
134 S A -0.1342 Soluble
135 V A 0.0133 Aggregation-prone
136 F A 0.0000 Buried
137 I A 0.0000 Buried
138 F A 0.0000 Buried
139 P A -0.2605 Soluble
140 P A -0.9701 Soluble
141 S A -1.6170 Soluble
142 D A -3.0249 Soluble
143 E A -3.2950 Soluble
144 Q A 0.0000 Buried
145 L A -2.0778 Soluble
146 K A -2.9541 Soluble
147 S A -1.8922 Soluble
148 G A -1.2537 Soluble
149 T A -0.8912 Soluble
150 A A 0.0000 Buried
151 S A 0.0000 Buried
152 V A 0.0000 Buried
153 V A 0.0000 Buried
154 C A 0.0000 Buried
155 L A 0.0000 Buried
156 L A 0.0000 Buried
157 N A -0.2610 Soluble
158 N A -0.5539 Soluble
159 F A 0.0000 Buried
160 Y A -0.8767 Soluble
161 P A -1.5685 Soluble
162 R A -2.9447 Soluble
163 E A -3.3562 Soluble
164 A A -2.4078 Soluble
165 K A -2.7161 Soluble
166 V A -1.2866 Soluble
167 Q A -0.6650 Soluble
168 W A 0.0000 Buried
169 K A -1.1075 Soluble
170 V A 0.0000 Buried
171 D A -2.6655 Soluble
172 N A -1.9293 Soluble
173 A A -0.6747 Soluble
174 L A 0.6736 Aggregation-prone
175 Q A -0.0993 Soluble
176 S A -0.3835 Soluble
177 G A -0.7414 Soluble
178 N A -0.9223 Soluble
179 S A -1.0528 Soluble
180 Q A -1.1894 Soluble
181 E A -1.8970 Soluble
182 S A -0.6817 Soluble
183 V A -0.5730 Soluble
184 T A -0.7012 Soluble
185 E A -1.2505 Soluble
186 Q A 0.0000 Buried
187 D A -1.8257 Soluble
188 S A -2.2579 Soluble
189 K A -2.8269 Soluble
190 D A -2.1200 Soluble
191 S A 0.0000 Buried
192 T A 0.0000 Buried
193 Y A -1.1428 Soluble
194 S A 0.0000 Buried
195 L A 0.0000 Buried
196 S A -0.4805 Soluble
197 S A 0.0000 Buried
198 T A 0.0000 Buried
199 L A 0.0000 Buried
200 T A -0.2448 Soluble
201 L A -0.8190 Soluble
202 S A -1.2134 Soluble
203 K A -2.2321 Soluble
204 A A -1.9655 Soluble
205 D A -3.0998 Soluble
206 Y A 0.0000 Buried
207 E A -3.7600 Soluble
208 K A -3.7676 Soluble
209 H A -3.0513 Soluble
210 K A -3.0934 Soluble
211 V A -1.9267 Soluble
212 Y A 0.0000 Buried
213 A A 0.0000 Buried
214 C A 0.0000 Buried
215 E A -0.6486 Soluble
216 V A 0.0000 Buried
217 T A -1.1414 Soluble
218 H A 0.0000 Buried
219 Q A -1.8249 Soluble
220 G A -0.5576 Soluble
221 L A -0.0758 Soluble
222 S A -0.3910 Soluble
223 S A -0.3346 Soluble
224 P A -0.3931 Soluble
225 V A 0.3140 Aggregation-prone
226 T A -0.3786 Soluble
227 K A -1.0676 Soluble
228 S A -1.1990 Soluble
229 F A 0.0000 Buried
230 N A -2.0346 Soluble
231 R A -2.0745 Soluble
232 G A -2.1511 Soluble
233 E A -2.1952 Soluble
234 C A -0.7444 Soluble

3D Structure — colored by A4D score

Sequence - click residue to focus in viewer  |  colored by A4D score
Load structure to view sequence…
Color Legend (B-factor = A4D Score)
Score > 1.5 — highly aggregation-prone
Score 0.5–1.5 — aggregation-prone
Score ≈ 0 — buried
Score −1 to −0.5 — soluble
Score < −2.5 — highly soluble
pH Structure
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A4D Score Threshold
Highlight residues > threshold in the sequence panel
CDR Regions
HCDR1
HCDR2
HCDR3
LCDR1
LCDR2
LCDR3
Display Options

pH-Dependent Aggregation Profiles

A4D scores calculated across 11 pH conditions (4.0–9.0, step 0.5). Click a row to view the structure at that pH. The input structure is globular — max score is recommended for pH analysis.

pH Avg A4D Score Max A4D Score Downloads
4.0 -0.7486 3.7209 CSV PDB
4.5 -0.7958 3.7209 CSV PDB
5.0 -0.8511 3.7209 CSV PDB
5.5 -0.9041 3.7209 CSV PDB
6.0 -0.9431 3.7209 CSV PDB
6.5 -0.9591 3.7209 CSV PDB
7.0 -0.952 3.7209 CSV PDB
7.5 -0.9293 3.7209 CSV PDB
8.0 -0.8978 3.7209 CSV PDB
8.5 -0.8592 3.7208 CSV PDB
9.0 -0.8126 3.7204 CSV PDB
Average A4D Score vs pH
Max A4D Score vs pH