Erzotabart / 8byu

A4DAB111_8byu_H_L | Source PDB: 8byu | Chains: H, L | Done
100
Yes
10 Å
Yes
Avg A4D Score
-0.6988
Max Score
2.3383
Min Score
-3.6876
Total Score
-303.98
Score CDR
-0.3061
Score non-CDR
-0.7475

Calculation Parameters

Chain Sequence(s) QVQLVQSGAEVKKPGSSVKVSCKAFGGTFSSYAISWVRQAPGQGLEWMGRIIRFLGIANYAQKFQGRVTLIADKSTNTAYMELSSLRSEDTAVYYCAGEPGERDPDAVDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKDIQMTQSPSSLSASVGDRVTITCRASQGIRSWLAWYQQKPEKAPKSLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYNSYPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE input.pdb
Selected Chain(s) H (Heavy), L (Light)
Distance of Aggregation 10 Å
FoldX Energy Minimization Yes
pH Calculations Yes
Downloads Download all data (.tar.gz)

Aggrescan4D Profile

Aggregation-prone (score > 0)
Soluble (score < 0)
Buried (score = 0)

Per-Residue A4D Scores

Download CSV
Minimum Score -3.6876
Maximum Score 2.3383
Average Score -0.6988
Total Score -303.9756

Residues with A4D score > 0.0 are highlighted as aggregation-prone.

Index Residue Chain A4D Score Classification
1 Q H -1.1416 Soluble
2 V H -0.0939 Soluble
3 Q H -0.3956 Soluble
4 L H 0.0000 Buried
5 V H 0.3022 Aggregation-prone
6 Q H 0.0000 Buried
7 S H -0.5250 Soluble
8 G H -0.5379 Soluble
9 A H 0.0081 Aggregation-prone
11 E H -0.0321 Soluble
12 V H 0.5115 Aggregation-prone
13 K H -1.0681 Soluble
14 K H -2.2076 Soluble
15 P H -2.0027 Soluble
16 G H -1.5531 Soluble
17 S H -1.2493 Soluble
18 S H -1.3010 Soluble
19 V H 0.0000 Buried
20 K H -1.7715 Soluble
21 V H 0.0000 Buried
22 S H -0.3866 Soluble
23 C H 0.0000 Buried
24 K H -0.4107 Soluble
25 A H 0.0000 Buried
26 F H 1.0523 Aggregation-prone
27 G H -0.1315 Soluble
28 G H -0.4312 Soluble
29 T H -0.1369 Soluble
30 F H 0.1598 Aggregation-prone
35 S H -0.0969 Soluble
36 S H 0.0000 Buried
37 Y H 0.0998 Aggregation-prone
38 A H 0.0000 Buried
39 I H 0.0000 Buried
40 S H 0.0000 Buried
41 W H 0.0000 Buried
42 V H 0.0000 Buried
43 R H -0.4640 Soluble
44 Q H -0.7299 Soluble
45 A H -1.0385 Soluble
46 P H -0.8353 Soluble
47 G H -1.2480 Soluble
48 Q H -1.7714 Soluble
49 G H -1.1740 Soluble
50 L H 0.0000 Buried
51 E H -0.7059 Soluble
52 W H 0.0000 Buried
53 M H 0.0000 Buried
54 G H 0.0000 Buried
55 R H 0.0000 Buried
56 I H 0.0000 Buried
57 I H 0.0000 Buried
58 R H 0.5595 Aggregation-prone
59 F H 1.9396 Aggregation-prone
62 L H 2.0463 Aggregation-prone
63 G H 1.0403 Aggregation-prone
64 I H 2.3383 Aggregation-prone
65 A H 0.8651 Aggregation-prone
66 N H -0.2064 Soluble
67 Y H -0.9395 Soluble
68 A H 0.0000 Buried
69 Q H -2.4393 Soluble
70 K H -2.6841 Soluble
71 F H 0.0000 Buried
72 Q H -2.3953 Soluble
74 G H -1.5781 Soluble
75 R H -1.4261 Soluble
76 V H 0.0000 Buried
77 T H -0.5370 Soluble
78 L H 0.0000 Buried
79 I H 0.1139 Aggregation-prone
80 A H -0.7785 Soluble
81 D H -2.4016 Soluble
82 K H -2.3711 Soluble
83 S H -1.8519 Soluble
84 T H -1.8895 Soluble
85 N H -1.9366 Soluble
86 T H 0.0000 Buried
87 A H 0.0000 Buried
88 Y H -0.2918 Soluble
89 M H 0.0000 Buried
90 E H -1.2725 Soluble
91 L H 0.0000 Buried
92 S H -1.0582 Soluble
93 S H -1.1571 Soluble
94 L H 0.0000 Buried
95 R H -2.7695 Soluble
96 S H -2.2064 Soluble
97 E H -2.4196 Soluble
98 D H 0.0000 Buried
99 T H -0.8363 Soluble
100 A H 0.0000 Buried
101 V H -0.0766 Soluble
102 Y H 0.0000 Buried
103 Y H 0.0000 Buried
104 C H 0.0000 Buried
105 A H 0.0000 Buried
106 G H 0.0000 Buried
107 E H 0.0000 Buried
108 P H -1.0841 Soluble
109 G H -1.5330 Soluble
110 E H -2.3292 Soluble
111 R H -1.9754 Soluble
112A D H -2.0526 Soluble
112 P H 0.0000 Buried
113 D H 0.0000 Buried
114 A H 0.0000 Buried
115 V H 0.0000 Buried
116 D H -1.2469 Soluble
117 I H -0.7730 Soluble
118 W H 0.0000 Buried
119 G H 0.0000 Buried
120 Q H -1.2490 Soluble
121 G H -0.8327 Soluble
122 T H 0.0000 Buried
123 M H 0.2847 Aggregation-prone
124 V H 0.0000 Buried
125 T H 0.0000 Buried
126 V H 0.0000 Buried
127 S H -1.2014 Soluble
128 S H -1.0435 Soluble
129 A H -0.5558 Soluble
130 S H -0.5618 Soluble
131 T H -0.5390 Soluble
132 K H -1.1762 Soluble
133 G H -1.2879 Soluble
134 P H 0.0000 Buried
135 S H -0.4107 Soluble
136 V H 0.0000 Buried
137 F H 0.0000 Buried
138 P H -1.2040 Soluble
139 L H 0.0000 Buried
140 A H -1.3155 Soluble
141 P H 0.0000 Buried
142 S H -1.1334 Soluble
143 S H -0.8100 Soluble
144 K H -1.1873 Soluble
145 S H 0.0000 Buried
146 T H -0.7485 Soluble
147 S H -0.7662 Soluble
148 G H -0.8558 Soluble
149 G H -0.8931 Soluble
150 T H -0.6082 Soluble
151 A H 0.0000 Buried
152 A H 0.0000 Buried
153 L H 0.0000 Buried
154 G H 0.0000 Buried
155 C H 0.0000 Buried
156 L H 0.0000 Buried
157 V H 0.0000 Buried
158 K H 0.0000 Buried
159 D H -0.3449 Soluble
160 Y H 0.0000 Buried
161 F H 0.0000 Buried
162 P H 0.0000 Buried
163 E H -0.6942 Soluble
164 P H -0.9312 Soluble
165 V H -0.6686 Soluble
166 T H -0.5132 Soluble
167 V H -0.0992 Soluble
168 S H -0.4366 Soluble
169 W H 0.0000 Buried
170 N H -0.9516 Soluble
171 S H -0.7741 Soluble
172 G H -0.6332 Soluble
173 A H -0.3082 Soluble
174 L H -0.0936 Soluble
175 T H -0.2165 Soluble
176 S H -0.3932 Soluble
177 G H -0.5194 Soluble
178 V H 0.1539 Aggregation-prone
179 H H 0.0000 Buried
180 T H 0.0407 Aggregation-prone
181 F H 0.0000 Buried
182 P H -0.3850 Soluble
183 A H -0.0008 Soluble
184 V H 0.3511 Aggregation-prone
185 L H 1.0884 Aggregation-prone
186 Q H 0.2583 Aggregation-prone
187 S H -0.0954 Soluble
188 S H -0.1758 Soluble
189 G H 0.0495 Aggregation-prone
190 L H 0.0737 Aggregation-prone
191 Y H 0.3267 Aggregation-prone
192 S H 0.0000 Buried
193 L H 0.0000 Buried
194 S H 0.0000 Buried
195 S H 0.0000 Buried
196 V H 0.0000 Buried
197 V H 0.0000 Buried
198 T H -0.1540 Soluble
199 V H 0.0000 Buried
200 P H -0.6394 Soluble
201 S H -0.5862 Soluble
202 S H -0.5929 Soluble
203 S H -0.6703 Soluble
204 L H -0.8633 Soluble
205 G H -1.0160 Soluble
206 T H -0.9828 Soluble
207 Q H -1.4411 Soluble
208 T H -1.2922 Soluble
209 Y H 0.0000 Buried
210 I H -1.5696 Soluble
211 C H 0.0000 Buried
212 N H -1.5646 Soluble
213 V H 0.0000 Buried
214 N H -1.7169 Soluble
215 H H 0.0000 Buried
216 K H -2.7067 Soluble
217 P H -1.6880 Soluble
218 S H -1.7895 Soluble
219 N H -2.5420 Soluble
220 T H -1.9817 Soluble
221 K H -2.5878 Soluble
222 V H -1.6265 Soluble
223 D H -2.6740 Soluble
224 K H -2.2177 Soluble
225 R H -2.8183 Soluble
226 V H 0.0000 Buried
227 E H -2.9029 Soluble
228 P H -1.8778 Soluble
229 K H -2.1879 Soluble
1 D L -2.0934 Soluble
2 I L -1.8296 Soluble
3 Q L -2.1820 Soluble
4 M L 0.0000 Buried
5 T L -1.3438 Soluble
6 Q L -0.8958 Soluble
7 S L -0.8342 Soluble
8 P L -0.5730 Soluble
9 S L -0.8138 Soluble
10 S L -0.8679 Soluble
11 L L -0.5874 Soluble
12 S L -0.9071 Soluble
13 A L 0.0000 Buried
14 S L -0.3100 Soluble
15 V L 0.5884 Aggregation-prone
16 G L -0.5756 Soluble
17 D L -1.3860 Soluble
18 R L -2.1847 Soluble
19 V L 0.0000 Buried
20 T L -0.5894 Soluble
21 I L 0.0000 Buried
22 T L -0.8422 Soluble
23 C L 0.0000 Buried
24 R L -2.8351 Soluble
25 A L 0.0000 Buried
26 S L -2.0553 Soluble
27 Q L -2.5541 Soluble
28 G L -2.0974 Soluble
29 I L 0.0000 Buried
36 R L -2.4261 Soluble
37 S L -1.2157 Soluble
38 W L -0.6151 Soluble
39 L L 0.0000 Buried
40 A L 0.0000 Buried
41 W L 0.0000 Buried
42 Y L 0.0000 Buried
43 Q L 0.0000 Buried
44 Q L 0.0000 Buried
45 K L -3.3022 Soluble
46 P L -2.8472 Soluble
47 E L -3.1511 Soluble
48 K L -3.5854 Soluble
49 A L -2.2057 Soluble
50 P L 0.0000 Buried
51 K L -2.2611 Soluble
52 S L 0.0000 Buried
53 L L 0.0000 Buried
54 I L 0.0000 Buried
55 Y L 0.0793 Aggregation-prone
56 A L -0.3609 Soluble
57 A L 0.0000 Buried
65 S L -0.2178 Soluble
66 S L 0.0928 Aggregation-prone
67 L L 0.1824 Aggregation-prone
68 Q L -0.4171 Soluble
69 S L -0.4912 Soluble
70 G L -0.4735 Soluble
71 V L -0.3248 Soluble
72 P L -0.2821 Soluble
74 S L -0.3557 Soluble
75 R L -0.7301 Soluble
76 F L 0.0000 Buried
77 S L -0.3215 Soluble
78 G L -0.2467 Soluble
79 S L -0.6288 Soluble
80 G L -1.2214 Soluble
83 S L -1.3631 Soluble
84 G L -1.9739 Soluble
85 T L -2.1767 Soluble
86 D L -2.4388 Soluble
87 F L 0.0000 Buried
88 T L -0.7309 Soluble
89 L L 0.0000 Buried
90 T L -0.6097 Soluble
91 I L 0.0000 Buried
92 S L -1.3488 Soluble
93 S L -1.0727 Soluble
94 L L 0.0000 Buried
95 Q L -0.7754 Soluble
96 P L -0.8336 Soluble
97 E L -1.9968 Soluble
98 D L 0.0000 Buried
99 F L -0.6699 Soluble
100 A L 0.0000 Buried
101 T L -1.1189 Soluble
102 Y L 0.0000 Buried
103 Y L 0.0000 Buried
104 C L 0.0000 Buried
105 Q L 0.0000 Buried
106 Q L 0.0000 Buried
107 Y L 0.0000 Buried
108 N L -0.9716 Soluble
109 S L -0.3170 Soluble
114 Y L -0.0268 Soluble
115 P L -0.5923 Soluble
116 L L 0.0000 Buried
117 T L -0.5576 Soluble
118 F L -0.2708 Soluble
119 G L 0.0000 Buried
120 G L -1.0800 Soluble
121 G L -0.8881 Soluble
122 T L 0.0000 Buried
123 K L -1.5993 Soluble
124 V L 0.0000 Buried
125 E L -0.9459 Soluble
126 I L -0.4782 Soluble
127 K L -1.2795 Soluble
128 R L -1.0422 Soluble
129 T L 0.1080 Aggregation-prone
130 V L 1.0254 Aggregation-prone
131 A L 0.4176 Aggregation-prone
132 A L 0.0216 Aggregation-prone
133 P L 0.0000 Buried
134 S L -0.2350 Soluble
135 V L 0.0000 Buried
136 F L 0.0000 Buried
137 I L 0.0000 Buried
138 F L 0.0000 Buried
139 P L -0.6793 Soluble
140 P L -0.8601 Soluble
141 S L -1.6518 Soluble
142 D L -3.0196 Soluble
143 E L -3.1541 Soluble
144 Q L 0.0000 Buried
145 L L -2.3066 Soluble
146 K L -2.8920 Soluble
147 S L -1.7862 Soluble
148 G L -1.2762 Soluble
149 T L -1.0713 Soluble
150 A L 0.0000 Buried
151 S L 0.0000 Buried
152 V L 0.0000 Buried
153 V L 0.0000 Buried
154 C L 0.0000 Buried
155 L L 0.0000 Buried
156 L L 0.0000 Buried
157 N L 0.0000 Buried
158 N L -0.8247 Soluble
159 F L 0.0000 Buried
160 Y L 0.0000 Buried
161 P L -1.2100 Soluble
162 R L -2.1898 Soluble
163 E L -2.8170 Soluble
164 A L -2.0899 Soluble
165 K L -2.2537 Soluble
166 V L -1.1633 Soluble
167 Q L -0.6576 Soluble
168 W L 0.0000 Buried
169 K L -0.4772 Soluble
170 V L 0.0000 Buried
171 D L -1.8036 Soluble
172 N L -1.3535 Soluble
173 A L -0.2571 Soluble
174 L L 0.6740 Aggregation-prone
175 Q L -0.1109 Soluble
176 S L -0.4169 Soluble
177 G L -0.8901 Soluble
178 N L -0.8244 Soluble
179 S L -1.1509 Soluble
180 Q L -1.3973 Soluble
181 E L -1.9956 Soluble
182 S L -1.0791 Soluble
183 V L -0.7931 Soluble
184 T L 0.0000 Buried
185 E L -2.2005 Soluble
186 Q L -1.7011 Soluble
187 D L -1.8265 Soluble
188 S L -1.6191 Soluble
189 K L -2.2189 Soluble
190 D L -1.5721 Soluble
191 S L -1.6248 Soluble
192 T L 0.0000 Buried
193 Y L 0.0000 Buried
194 S L 0.0000 Buried
195 L L 0.0000 Buried
196 S L 0.0000 Buried
197 S L 0.0000 Buried
198 T L -0.6762 Soluble
199 L L 0.0000 Buried
200 T L -0.4693 Soluble
201 L L -0.7854 Soluble
202 S L -1.1859 Soluble
203 K L -2.1870 Soluble
204 A L -2.0608 Soluble
205 D L -2.9512 Soluble
206 Y L 0.0000 Buried
207 E L -3.6281 Soluble
208 K L -3.6876 Soluble
209 H L -3.1071 Soluble
210 K L -3.1950 Soluble
211 V L -1.4753 Soluble
212 Y L 0.0000 Buried
213 A L 0.0000 Buried
214 C L 0.0000 Buried
215 E L -0.6027 Soluble
216 V L 0.0000 Buried
217 T L -1.2326 Soluble
218 H L 0.0000 Buried
219 Q L -1.3681 Soluble
220 G L -0.2644 Soluble
221 L L -0.1365 Soluble
222 S L -0.4710 Soluble
223 S L -0.4104 Soluble
224 P L -0.5136 Soluble
225 V L 0.1811 Aggregation-prone
226 T L -0.2954 Soluble
227 K L -0.6291 Soluble
228 S L -0.5548 Soluble
229 F L 0.0000 Buried
230 N L -2.0427 Soluble
231 R L -2.5117 Soluble
232 G L -2.1371 Soluble
233 E L -2.5203 Soluble

3D Structure — colored by A4D score

Sequence - click residue to focus in viewer  |  colored by A4D score
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Color Legend (B-factor = A4D Score)
Score > 1.5 — highly aggregation-prone
Score 0.5–1.5 — aggregation-prone
Score ≈ 0 — buried
Score −1 to −0.5 — soluble
Score < −2.5 — highly soluble
pH Structure
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A4D Score Threshold
Highlight residues > threshold in the sequence panel
CDR Regions
HCDR1
HCDR2
HCDR3
LCDR1
LCDR2
LCDR3
Display Options

pH-Dependent Aggregation Profiles

A4D scores calculated across 11 pH conditions (4.0–9.0, step 0.5). Click a row to view the structure at that pH. The input structure is globular — max score is recommended for pH analysis.

pH Avg A4D Score Max A4D Score Downloads
4.0 -0.7123 4.0106 CSV PDB
4.5 -0.7571 3.9599 CSV PDB
5.0 -0.8089 3.91 CSV PDB
5.5 -0.8574 3.8768 CSV PDB
6.0 -0.8913 3.8768 CSV PDB
6.5 -0.9012 3.8768 CSV PDB
7.0 -0.8865 3.8768 CSV PDB
7.5 -0.855 3.9208 CSV PDB
8.0 -0.8139 3.9917 CSV PDB
8.5 -0.7658 4.0796 CSV PDB
9.0 -0.7113 4.1807 CSV PDB
Average A4D Score vs pH
Max A4D Score vs pH