Adalimumab / 8xj0

A4DAB005_8xj0_B_A | Source PDB: 8xj0 | Chains: B, A | Done
99.12
Yes
10 Å
Yes
Avg A4D Score
-0.6944
Max Score
1.9367
Min Score
-4.0352
Total Score
-297.21
Score CDR
-0.4541
Score non-CDR
-0.7248

Calculation Parameters

Chain Sequence(s) EVQLVESGGCLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSAITWNSGHIDYADSVEGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAKVSYLSTASSLDYWGQGTLVTVSSASTKGPSVFPLAPSSKGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKCSNTKVDKKVEPIQMTQSPSSLSASVGDRVTITCRASQGIRNYLAWYQQKCGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQRYNRAPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTCQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG input.pdb
Selected Chain(s) B (Heavy), A (Light)
Distance of Aggregation 10 Å
FoldX Energy Minimization Yes
pH Calculations Yes
Downloads Download all data (.tar.gz)

Aggrescan4D Profile

Aggregation-prone (score > 0)
Soluble (score < 0)
Buried (score = 0)

Per-Residue A4D Scores

Download CSV
Minimum Score -4.0352
Maximum Score 1.9367
Average Score -0.6944
Total Score -297.2081

Residues with A4D score > 0.0 are highlighted as aggregation-prone.

Index Residue Chain A4D Score Classification
1 E B -2.0352 Soluble
2 V B -1.0482 Soluble
3 Q B -1.1375 Soluble
4 L B 0.0000 Buried
5 V B 1.0291 Aggregation-prone
6 E B 0.2435 Aggregation-prone
7 S B -0.4599 Soluble
8 G B -0.9317 Soluble
9 G B -0.4581 Soluble
11 C B -0.0089 Soluble
12 L B 0.0843 Aggregation-prone
13 V B 0.0000 Buried
14 Q B -2.1416 Soluble
15 P B -2.2380 Soluble
16 G B -2.2400 Soluble
17 R B -2.8651 Soluble
18 S B -2.1534 Soluble
19 L B -1.5410 Soluble
20 R B -2.1025 Soluble
21 L B 0.0000 Buried
22 S B -0.4304 Soluble
23 C B 0.0000 Buried
24 A B -0.2594 Soluble
25 A B 0.0000 Buried
26 S B -0.7529 Soluble
27 G B -1.1339 Soluble
28 F B -0.7710 Soluble
29 T B -0.8626 Soluble
30 F B 0.0000 Buried
35 D B -2.3422 Soluble
36 D B -1.0619 Soluble
37 Y B 0.0522 Aggregation-prone
38 A B 0.0000 Buried
39 M B 0.0000 Buried
40 H B 0.0000 Buried
41 W B 0.0000 Buried
42 V B 0.0000 Buried
43 R B 0.0000 Buried
44 Q B -0.8295 Soluble
45 A B -1.2551 Soluble
46 P B -0.9653 Soluble
47 G B -1.4736 Soluble
48 K B -2.3291 Soluble
49 G B -1.5736 Soluble
50 L B 0.0000 Buried
51 E B -1.0633 Soluble
52 W B 0.0000 Buried
53 V B 0.0000 Buried
54 S B 0.0000 Buried
55 A B 0.0000 Buried
56 I B 0.0000 Buried
57 T B 0.0000 Buried
58 W B -1.2483 Soluble
59 N B -2.1377 Soluble
62 S B -1.1849 Soluble
63 G B -1.2216 Soluble
64 H B -1.1921 Soluble
65 I B -0.1398 Soluble
66 D B -1.2234 Soluble
67 Y B -1.0677 Soluble
68 A B 0.0000 Buried
69 D B -2.5297 Soluble
70 S B -1.4852 Soluble
71 V B 0.0000 Buried
72 E B -2.7165 Soluble
74 G B -1.6881 Soluble
75 R B 0.0000 Buried
76 F B 0.0000 Buried
77 T B -0.7709 Soluble
78 I B 0.0000 Buried
79 S B -0.3566 Soluble
80 R B -1.1699 Soluble
81 D B -1.7304 Soluble
82 N B -2.0905 Soluble
83 A B -1.5488 Soluble
84 K B -2.2109 Soluble
85 N B -1.9485 Soluble
86 S B -0.9444 Soluble
87 L B 0.0000 Buried
88 Y B -0.4508 Soluble
89 L B 0.0000 Buried
90 Q B -1.1929 Soluble
91 M B 0.0000 Buried
92 N B -1.7978 Soluble
93 S B -1.7627 Soluble
94 L B 0.0000 Buried
95 R B -2.5322 Soluble
96 A B -1.7532 Soluble
97 E B -2.2243 Soluble
98 D B 0.0000 Buried
99 T B -0.7476 Soluble
100 A B 0.0000 Buried
101 V B 0.1627 Aggregation-prone
102 Y B 0.0000 Buried
103 Y B 0.0000 Buried
104 C B 0.0000 Buried
105 A B 0.0000 Buried
106 K B 0.0000 Buried
107 V B 0.0000 Buried
108 S B 0.0000 Buried
109 Y B 1.9367 Aggregation-prone
110 L B 1.8644 Aggregation-prone
111 S B 1.0613 Aggregation-prone
112A T B 0.2043 Aggregation-prone
112 A B -0.0775 Soluble
113 S B 0.0000 Buried
114 S B 0.0000 Buried
115 L B 0.0000 Buried
116 D B -0.0152 Soluble
117 Y B 0.2137 Aggregation-prone
118 W B 0.0000 Buried
119 G B 0.0000 Buried
120 Q B -1.2970 Soluble
121 G B -0.5192 Soluble
122 T B -0.0190 Soluble
123 L B 0.0852 Aggregation-prone
124 V B 0.0000 Buried
125 T B 0.0000 Buried
126 V B 0.0000 Buried
127 S B -0.9418 Soluble
128 S B -0.6985 Soluble
129 A B -0.4210 Soluble
130 S B -0.5724 Soluble
131 T B -0.6944 Soluble
132 K B -1.2388 Soluble
133 G B -1.3759 Soluble
134 P B 0.0000 Buried
135 S B -0.4363 Soluble
136 V B 0.0000 Buried
137 F B 0.0000 Buried
138 P B -1.2355 Soluble
139 L B 0.0000 Buried
140 A B -0.9614 Soluble
141 P B 0.0000 Buried
142 S B -0.7678 Soluble
143 S B -0.6478 Soluble
144 K B -0.8138 Soluble
145 G B -0.6014 Soluble
146 T B -0.5018 Soluble
147 A B -0.4355 Soluble
148 A B 0.0000 Buried
149 L B 0.0000 Buried
150 G B 0.0000 Buried
151 C B 0.0000 Buried
152 L B 0.0000 Buried
153 V B 0.0000 Buried
154 K B 0.0000 Buried
155 D B -0.2824 Soluble
156 Y B 0.0000 Buried
157 F B 0.0000 Buried
158 P B 0.0000 Buried
159 E B -0.2275 Soluble
160 P B -0.5315 Soluble
161 V B -0.6697 Soluble
162 T B -0.6257 Soluble
163 V B -0.2735 Soluble
164 S B -0.3947 Soluble
165 W B 0.0000 Buried
166 N B -0.7037 Soluble
167 S B -0.6110 Soluble
168 G B -0.4068 Soluble
169 A B -0.2016 Soluble
170 L B 0.0099 Aggregation-prone
171 T B -0.1528 Soluble
172 S B -0.1964 Soluble
173 G B -0.2309 Soluble
174 V B 0.1908 Aggregation-prone
175 H B 0.0615 Aggregation-prone
176 T B 0.0764 Aggregation-prone
177 F B 0.0000 Buried
178 P B 0.0906 Aggregation-prone
179 A B 0.3936 Aggregation-prone
180 V B 0.7150 Aggregation-prone
181 L B 1.3409 Aggregation-prone
182 Q B 0.2546 Aggregation-prone
183 S B -0.1381 Soluble
184 S B -0.1750 Soluble
185 G B 0.1488 Aggregation-prone
186 L B 0.2900 Aggregation-prone
187 Y B 0.6395 Aggregation-prone
188 S B 0.0000 Buried
189 L B 0.0000 Buried
190 S B 0.0000 Buried
191 S B 0.0000 Buried
192 V B 0.0000 Buried
193 V B 0.0000 Buried
194 T B -0.1527 Soluble
195 V B 0.0000 Buried
196 P B -0.5489 Soluble
197 S B -0.5611 Soluble
198 S B -0.5860 Soluble
199 S B -0.6283 Soluble
200 L B -0.8390 Soluble
201 G B -1.0355 Soluble
202 T B -0.7501 Soluble
203 Q B -1.2782 Soluble
204 T B -1.1221 Soluble
205 Y B 0.0000 Buried
206 I B -1.3207 Soluble
207 C B 0.0000 Buried
208 N B -1.4958 Soluble
209 V B 0.0000 Buried
210 N B -2.1614 Soluble
211 H B 0.0000 Buried
212 K B -2.5773 Soluble
213 C B -1.3291 Soluble
214 S B -1.7740 Soluble
215 N B -2.4675 Soluble
216 T B -2.0749 Soluble
217 K B -2.7150 Soluble
218 V B -1.4812 Soluble
219 D B -2.4390 Soluble
220 K B -2.0666 Soluble
221 K B -2.5293 Soluble
222 V B 0.0000 Buried
223 E B -2.4942 Soluble
224 P B -1.2355 Soluble
2 I A 0.8965 Aggregation-prone
3 Q A -0.8613 Soluble
4 M A 0.0000 Buried
5 T A -1.5629 Soluble
6 Q A 0.0000 Buried
7 S A -0.6872 Soluble
8 P A -0.6584 Soluble
9 S A -0.9691 Soluble
10 S A -0.9521 Soluble
11 L A -0.6164 Soluble
12 S A -0.6886 Soluble
13 A A -0.8871 Soluble
14 S A -0.8314 Soluble
15 V A -0.2138 Soluble
16 G A -0.8929 Soluble
17 D A -1.7872 Soluble
18 R A -2.3496 Soluble
19 V A 0.0000 Buried
20 T A -0.6041 Soluble
21 I A 0.0000 Buried
22 T A -0.9014 Soluble
23 C A 0.0000 Buried
24 R A -2.9698 Soluble
25 A A 0.0000 Buried
26 S A -1.3377 Soluble
27 Q A -1.6472 Soluble
28 G A -1.8450 Soluble
29 I A 0.0000 Buried
36 R A -2.6085 Soluble
37 N A -1.4351 Soluble
38 Y A -0.7213 Soluble
39 L A 0.0000 Buried
40 A A 0.0000 Buried
41 W A 0.0000 Buried
42 Y A 0.0000 Buried
43 Q A -1.0278 Soluble
44 Q A 0.0000 Buried
45 K A -1.2465 Soluble
46 C A -0.1819 Soluble
47 G A -1.0990 Soluble
48 K A -2.2818 Soluble
49 A A -1.5294 Soluble
50 P A 0.0000 Buried
51 K A -1.8413 Soluble
52 L A 0.0000 Buried
53 L A 0.0000 Buried
54 I A 0.0000 Buried
55 Y A 0.2143 Aggregation-prone
56 A A -0.1952 Soluble
57 A A 0.0000 Buried
65 S A -0.2019 Soluble
66 T A 0.0378 Aggregation-prone
67 L A 0.2344 Aggregation-prone
68 Q A -0.4103 Soluble
69 S A -0.4549 Soluble
70 G A -0.6077 Soluble
71 V A 0.0000 Buried
72 P A -0.4493 Soluble
74 S A -0.4809 Soluble
75 R A -0.7913 Soluble
76 F A 0.0000 Buried
77 S A -0.2727 Soluble
78 G A 0.0000 Buried
79 S A -0.6715 Soluble
80 G A -1.4763 Soluble
83 S A -1.6444 Soluble
84 G A -2.2907 Soluble
85 T A -2.3978 Soluble
86 D A -3.0532 Soluble
87 F A 0.0000 Buried
88 T A -0.8416 Soluble
89 L A 0.0000 Buried
90 T A -0.6026 Soluble
91 I A 0.0000 Buried
92 S A -1.3660 Soluble
93 S A -1.2189 Soluble
94 L A 0.0000 Buried
95 Q A -1.1317 Soluble
96 P A -1.9384 Soluble
97 E A -2.4529 Soluble
98 D A 0.0000 Buried
99 V A -1.1968 Soluble
100 A A 0.0000 Buried
101 T A -0.8029 Soluble
102 Y A 0.0000 Buried
103 Y A 0.0000 Buried
104 C A 0.0000 Buried
105 Q A 0.0000 Buried
106 R A 0.0000 Buried
107 Y A 0.0000 Buried
108 N A -1.5115 Soluble
109 R A -1.8280 Soluble
114 A A -0.7543 Soluble
115 P A -0.6297 Soluble
116 Y A 0.0000 Buried
117 T A -0.3630 Soluble
118 F A 0.0000 Buried
119 G A 0.0000 Buried
120 Q A -1.7689 Soluble
121 G A 0.0000 Buried
122 T A 0.0000 Buried
123 K A -1.9967 Soluble
124 V A 0.0000 Buried
125 E A -1.1559 Soluble
126 I A 0.0000 Buried
127 K A -0.9766 Soluble
128 R A -0.7618 Soluble
129 T A 0.2019 Aggregation-prone
130 V A 1.0096 Aggregation-prone
131 A A 0.2984 Aggregation-prone
132 A A 0.0342 Aggregation-prone
133 P A 0.0000 Buried
134 S A -0.2414 Soluble
135 V A 0.0000 Buried
136 F A 0.0000 Buried
137 I A 0.0000 Buried
138 F A 0.0000 Buried
139 P A -0.8374 Soluble
140 P A -1.0925 Soluble
141 S A -1.7137 Soluble
142 D A -2.9799 Soluble
143 E A -2.9849 Soluble
144 Q A 0.0000 Buried
145 L A -2.3368 Soluble
146 K A -2.8107 Soluble
147 S A -1.7846 Soluble
148 G A -1.2398 Soluble
149 T A -0.9039 Soluble
150 A A 0.0000 Buried
151 S A 0.0000 Buried
152 V A 0.0000 Buried
153 V A 0.0000 Buried
154 C A 0.0000 Buried
155 L A 0.0000 Buried
156 L A 0.0000 Buried
157 N A 0.0000 Buried
158 N A -0.9470 Soluble
159 F A 0.0000 Buried
160 Y A 0.0000 Buried
161 P A 0.0000 Buried
162 R A -1.9802 Soluble
163 E A -2.8830 Soluble
164 A A -2.2086 Soluble
165 K A -2.2418 Soluble
166 V A -1.1800 Soluble
167 Q A -0.6725 Soluble
168 W A 0.0000 Buried
169 K A -0.8439 Soluble
170 V A 0.0000 Buried
171 D A -1.9385 Soluble
172 N A -1.4648 Soluble
173 A A -0.6093 Soluble
174 L A -0.0961 Soluble
175 Q A -0.6000 Soluble
176 S A -0.5793 Soluble
177 G A -0.9899 Soluble
178 N A -0.9974 Soluble
179 S A -1.3021 Soluble
180 Q A -1.7500 Soluble
181 E A -1.7197 Soluble
182 S A 0.0000 Buried
183 V A 0.0692 Aggregation-prone
184 T A 0.2519 Aggregation-prone
185 C A 0.3184 Aggregation-prone
186 Q A 0.0000 Buried
187 D A -1.9522 Soluble
188 S A -2.2390 Soluble
189 K A -3.0438 Soluble
190 D A -2.6466 Soluble
191 S A 0.0000 Buried
192 T A 0.0000 Buried
193 Y A 0.0000 Buried
194 S A 0.0000 Buried
195 L A 0.0000 Buried
196 S A 0.0000 Buried
197 S A 0.0000 Buried
198 T A -0.8032 Soluble
199 L A 0.0000 Buried
200 T A -0.5954 Soluble
201 L A 0.0000 Buried
202 S A -1.1861 Soluble
203 K A -2.2456 Soluble
204 A A -2.0405 Soluble
205 D A -2.5965 Soluble
206 Y A 0.0000 Buried
207 E A -4.0352 Soluble
208 K A -3.9235 Soluble
209 H A -3.2977 Soluble
210 K A -3.4767 Soluble
211 V A -1.6062 Soluble
212 Y A 0.0000 Buried
213 A A 0.0000 Buried
214 C A 0.0000 Buried
215 E A -0.7671 Soluble
216 V A 0.0000 Buried
217 T A -1.1850 Soluble
218 H A 0.0000 Buried
219 Q A -1.5028 Soluble
220 G A -0.1667 Soluble
221 L A -0.1685 Soluble
222 S A -0.4593 Soluble
223 S A -0.4536 Soluble
224 P A -0.5731 Soluble
225 V A -0.0780 Soluble
226 T A -0.3959 Soluble
227 K A -0.6646 Soluble
228 S A -0.6853 Soluble
229 F A -1.0557 Soluble
230 N A -2.1743 Soluble
231 R A -3.3912 Soluble
232 G A -3.3636 Soluble

3D Structure — colored by A4D score

Sequence - click residue to focus in viewer  |  colored by A4D score
Load structure to view sequence…
Color Legend (B-factor = A4D Score)
Score > 1.5 — highly aggregation-prone
Score 0.5–1.5 — aggregation-prone
Score ≈ 0 — buried
Score −1 to −0.5 — soluble
Score < −2.5 — highly soluble
pH Structure
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A4D Score Threshold
Highlight residues > threshold in the sequence panel
CDR Regions
HCDR1
HCDR2
HCDR3
LCDR1
LCDR2
LCDR3
Display Options

pH-Dependent Aggregation Profiles

A4D scores calculated across 11 pH conditions (4.0–9.0, step 0.5). Click a row to view the structure at that pH. The input structure is globular — max score is recommended for pH analysis.

pH Avg A4D Score Max A4D Score Downloads
4.0 -0.7461 2.5651 CSV PDB
4.5 -0.7874 2.5013 CSV PDB
5.0 -0.8363 2.4225 CSV PDB
5.5 -0.8839 2.3359 CSV PDB
6.0 -0.9189 2.2463 CSV PDB
6.5 -0.9323 2.1558 CSV PDB
7.0 -0.9242 2.0751 CSV PDB
7.5 -0.9024 2.0394 CSV PDB
8.0 -0.8732 2.0041 CSV PDB
8.5 -0.8379 1.969 CSV PDB
9.0 -0.7961 1.9316 CSV PDB
Average A4D Score vs pH
Max A4D Score vs pH