Barecetamab / 7d85

A4DAB034_7d85_B_C | Source PDB: 7d85 | Chains: B, C | Done
100
Yes
10 Å
Yes
Avg A4D Score
-0.7056
Max Score
1.4918
Min Score
-3.1924
Total Score
-304.12
Score CDR
-0.4345
Score non-CDR
-0.7428

Calculation Parameters

Chain Sequence(s) EVQLLESGGGLVQPGGSLRLSCAASGFTFSDYDMSWVRQAPGKGLEWVSTIDLDSGSIYYADSVQGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDLHMGPEGPFDYWGQGTLVTVSSASTKGPSVFPLAPSSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSVLTQPPSASGTPGQRVTISCSGSSSNIGSNSVSWYQQLPGTAPKLLIYSDNHRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCQGWDTSLSGHVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTE input.pdb
Selected Chain(s) B (Heavy), C (Light)
Distance of Aggregation 10 Å
FoldX Energy Minimization Yes
pH Calculations Yes
Downloads Download all data (.tar.gz)

Aggrescan4D Profile

Aggregation-prone (score > 0)
Soluble (score < 0)
Buried (score = 0)

Per-Residue A4D Scores

Download CSV
Minimum Score -3.1924
Maximum Score 1.4918
Average Score -0.7056
Total Score -304.1233

Residues with A4D score > 0.0 are highlighted as aggregation-prone.

Index Residue Chain A4D Score Classification
1 E B -1.8648 Soluble
2 V B -0.8470 Soluble
3 Q B -0.8249 Soluble
4 L B 0.0000 Buried
5 L B 0.2547 Aggregation-prone
6 E B 0.0000 Buried
7 S B -0.6070 Soluble
8 G B -0.9374 Soluble
9 G B -0.5232 Soluble
11 G B -0.0879 Soluble
12 L B 0.0179 Aggregation-prone
13 V B -0.5269 Soluble
14 Q B -1.5215 Soluble
15 P B -1.6805 Soluble
16 G B -1.4362 Soluble
17 G B -1.1342 Soluble
18 S B -1.3233 Soluble
19 L B -1.0628 Soluble
20 R B -2.0869 Soluble
21 L B 0.0000 Buried
22 S B -0.4752 Soluble
23 C B 0.0000 Buried
24 A B -0.2291 Soluble
25 A B -0.4439 Soluble
26 S B -0.6233 Soluble
27 G B -1.0299 Soluble
28 F B -0.5472 Soluble
29 T B -0.3874 Soluble
30 F B 0.0000 Buried
35 S B -1.2174 Soluble
36 D B -1.2203 Soluble
37 Y B -0.4963 Soluble
38 D B -0.4293 Soluble
39 M B 0.0000 Buried
40 S B 0.0000 Buried
41 W B 0.0000 Buried
42 V B 0.0000 Buried
43 R B 0.0000 Buried
44 Q B -0.7675 Soluble
45 A B -1.1793 Soluble
46 P B -0.9653 Soluble
47 G B -1.4677 Soluble
48 K B -2.2596 Soluble
49 G B -1.4675 Soluble
50 L B 0.0000 Buried
51 E B -0.9797 Soluble
52 W B 0.0000 Buried
53 V B 0.0000 Buried
54 S B 0.0000 Buried
55 T B 0.0000 Buried
56 I B 0.0000 Buried
57 D B -0.6539 Soluble
58 L B -1.1376 Soluble
59 D B -2.2278 Soluble
62 S B -1.2179 Soluble
63 G B -0.9545 Soluble
64 S B -0.0937 Soluble
65 I B 0.8657 Aggregation-prone
66 Y B 0.7476 Aggregation-prone
67 Y B -0.0862 Soluble
68 A B -1.0234 Soluble
69 D B -2.0390 Soluble
70 S B -1.3789 Soluble
71 V B 0.0000 Buried
72 Q B -1.9660 Soluble
74 G B -1.4513 Soluble
75 R B 0.0000 Buried
76 F B 0.0000 Buried
77 T B -0.5716 Soluble
78 I B 0.0000 Buried
79 S B -0.1747 Soluble
80 R B -1.1059 Soluble
81 D B -1.5801 Soluble
82 N B -1.8885 Soluble
83 S B -1.5303 Soluble
84 K B -2.2911 Soluble
85 N B -1.6173 Soluble
86 T B -0.9508 Soluble
87 L B 0.0000 Buried
88 Y B -0.3583 Soluble
89 L B 0.0000 Buried
90 Q B -1.1680 Soluble
91 M B 0.0000 Buried
92 N B -1.7282 Soluble
93 S B -1.3588 Soluble
94 L B 0.0000 Buried
95 R B -2.3210 Soluble
96 A B -1.7288 Soluble
97 E B -2.2265 Soluble
98 D B 0.0000 Buried
99 T B -0.7577 Soluble
100 A B 0.0000 Buried
101 V B 0.1784 Aggregation-prone
102 Y B 0.0000 Buried
103 Y B 0.0000 Buried
104 C B 0.0000 Buried
105 A B 0.0000 Buried
106 K B 0.0000 Buried
107 D B -0.3820 Soluble
108 L B 0.0415 Aggregation-prone
109 H B -0.2465 Soluble
110 M B 0.6386 Aggregation-prone
111 G B -0.0779 Soluble
112A P B -0.6943 Soluble
112 E B -1.4111 Soluble
113 G B -0.6689 Soluble
114 P B -0.3914 Soluble
115 F B 0.0000 Buried
116 D B -0.8760 Soluble
117 Y B -0.3820 Soluble
118 W B 0.0000 Buried
119 G B 0.0000 Buried
120 Q B -1.1561 Soluble
121 G B -0.4314 Soluble
122 T B -0.1746 Soluble
123 L B 0.0074 Aggregation-prone
124 V B 0.0000 Buried
125 T B -0.4120 Soluble
126 V B 0.0000 Buried
127 S B -0.9211 Soluble
128 S B -0.5943 Soluble
129 A B -0.3958 Soluble
130 S B -0.4958 Soluble
131 T B -0.4779 Soluble
132 K B -0.9663 Soluble
133 G B -1.3482 Soluble
134 P B -0.6368 Soluble
135 S B -0.3207 Soluble
136 V B 0.0000 Buried
137 F B 0.0000 Buried
138 P B -1.2209 Soluble
139 L B 0.0000 Buried
140 A B -1.3565 Soluble
141 P B 0.0000 Buried
142 S B -0.9612 Soluble
143 S B -0.7003 Soluble
144 G B -0.7225 Soluble
145 G B -0.8411 Soluble
146 T B -0.6474 Soluble
147 A B 0.0000 Buried
148 A B -0.1664 Soluble
149 L B 0.0000 Buried
150 G B 0.0000 Buried
151 C B 0.0000 Buried
152 L B 0.0000 Buried
153 V B 0.0000 Buried
154 K B -0.3423 Soluble
155 D B -0.4309 Soluble
156 Y B 0.0000 Buried
157 F B 0.0000 Buried
158 P B 0.0000 Buried
159 E B -0.7003 Soluble
160 P B -0.8596 Soluble
161 V B 0.0000 Buried
162 T B -0.6583 Soluble
163 V B -0.4470 Soluble
164 S B -0.4448 Soluble
165 W B 0.0000 Buried
166 N B -0.8141 Soluble
167 S B -0.6925 Soluble
168 G B -0.5923 Soluble
169 A B -0.2557 Soluble
170 L B -0.0166 Soluble
171 T B -0.2097 Soluble
172 S B -0.4335 Soluble
173 G B -0.5633 Soluble
174 V B -0.0017 Soluble
175 H B -0.2288 Soluble
176 T B -0.0389 Soluble
177 F B 0.0000 Buried
178 P B -0.0756 Soluble
179 A B 0.0841 Aggregation-prone
180 V B 0.0000 Buried
181 L B 0.9578 Aggregation-prone
182 Q B 0.0463 Aggregation-prone
183 S B -0.2408 Soluble
184 S B -0.2093 Soluble
185 G B 0.0143 Aggregation-prone
186 L B 0.1213 Aggregation-prone
187 Y B 0.2722 Aggregation-prone
188 S B 0.0000 Buried
189 L B 0.0000 Buried
190 S B 0.0000 Buried
191 S B 0.0000 Buried
192 V B 0.0000 Buried
193 V B 0.0000 Buried
194 T B -0.2266 Soluble
195 V B 0.0000 Buried
196 P B -0.5161 Soluble
197 S B -0.5953 Soluble
198 S B -0.5532 Soluble
199 S B -0.6176 Soluble
200 L B -0.8847 Soluble
201 G B -1.1092 Soluble
202 T B -1.0114 Soluble
203 Q B -1.3919 Soluble
204 T B -1.2209 Soluble
205 Y B 0.0000 Buried
206 I B -1.2898 Soluble
207 C B 0.0000 Buried
208 N B -1.5438 Soluble
209 V B 0.0000 Buried
210 N B -1.9720 Soluble
211 H B 0.0000 Buried
212 K B -2.8359 Soluble
213 P B -1.6419 Soluble
214 S B -1.7886 Soluble
215 N B -2.5562 Soluble
216 T B -2.1001 Soluble
217 K B -2.7198 Soluble
218 V B -1.7876 Soluble
219 D B -2.5825 Soluble
220 K B -2.0763 Soluble
221 K B -2.4579 Soluble
222 V B 0.0000 Buried
223 E B -2.9397 Soluble
224 P B -2.1980 Soluble
225 K B -2.3543 Soluble
2 S C 0.5211 Aggregation-prone
3 V C 1.4918 Aggregation-prone
4 L C 0.0000 Buried
5 T C 0.0100 Aggregation-prone
6 Q C -0.3121 Soluble
7 P C -0.7230 Soluble
8 P C -1.0032 Soluble
9 S C -1.0876 Soluble
11 A C -0.7412 Soluble
12 S C -0.7098 Soluble
13 G C 0.0000 Buried
14 T C -1.0237 Soluble
15 P C -1.5331 Soluble
16 G C -1.7707 Soluble
17 Q C -2.3195 Soluble
18 R C -2.6814 Soluble
19 V C 0.0000 Buried
20 T C -0.5836 Soluble
21 I C 0.0000 Buried
22 S C -0.3535 Soluble
23 C C 0.0000 Buried
24 S C -0.2205 Soluble
25 G C -0.1939 Soluble
26 S C -0.3722 Soluble
27 S C -0.6839 Soluble
28 S C -0.2689 Soluble
29 N C 0.0000 Buried
30 I C 0.0000 Buried
35 G C -0.8907 Soluble
36 S C -0.6410 Soluble
37 N C -0.5452 Soluble
38 S C -0.6478 Soluble
39 V C 0.0000 Buried
40 S C 0.0000 Buried
41 W C 0.0000 Buried
42 Y C 0.0000 Buried
43 Q C -0.4860 Soluble
44 Q C -0.5626 Soluble
45 L C -0.4187 Soluble
46 P C -0.3865 Soluble
47 G C -0.6491 Soluble
48 T C -0.6456 Soluble
49 A C -0.7255 Soluble
50 P C 0.0000 Buried
51 K C -1.0454 Soluble
52 L C 0.0000 Buried
53 L C 0.0000 Buried
54 I C 0.0000 Buried
55 Y C 0.0000 Buried
56 S C -1.4358 Soluble
57 D C -1.6946 Soluble
65 N C -2.3696 Soluble
66 H C -2.6008 Soluble
67 R C -2.3660 Soluble
68 P C -1.4044 Soluble
69 S C -1.0765 Soluble
70 G C -0.8870 Soluble
71 V C -1.1425 Soluble
72 P C -1.3950 Soluble
74 D C -2.4350 Soluble
75 R C -1.6413 Soluble
76 F C 0.0000 Buried
77 S C -1.5041 Soluble
78 G C -1.3722 Soluble
79 S C -1.1943 Soluble
80 K C -1.1551 Soluble
83 S C -0.8070 Soluble
84 G C -0.8982 Soluble
85 T C -0.7808 Soluble
86 S C -0.6916 Soluble
87 A C 0.0000 Buried
88 S C -0.6257 Soluble
89 L C 0.0000 Buried
90 A C -0.8618 Soluble
91 I C 0.0000 Buried
92 S C -1.9525 Soluble
93 G C -1.7932 Soluble
94 L C 0.0000 Buried
95 R C -2.0838 Soluble
96 S C -1.8203 Soluble
97 E C -2.3388 Soluble
98 D C 0.0000 Buried
99 E C -1.3070 Soluble
100 A C 0.0000 Buried
101 D C 0.0000 Buried
102 Y C 0.0000 Buried
103 Y C 0.0000 Buried
104 C C 0.0000 Buried
105 Q C 0.0000 Buried
106 G C 0.0000 Buried
107 W C 0.1633 Aggregation-prone
108 D C 0.0000 Buried
109 T C 0.0595 Aggregation-prone
110 S C 0.2751 Aggregation-prone
113 L C 0.7668 Aggregation-prone
114 S C 0.4181 Aggregation-prone
115 G C 0.0000 Buried
116 H C 0.0982 Aggregation-prone
117 V C 0.0000 Buried
118 F C 0.0000 Buried
119 G C 0.0000 Buried
120 G C -0.8519 Soluble
121 G C -1.1519 Soluble
122 T C 0.0000 Buried
123 K C -1.9604 Soluble
124 L C 0.0000 Buried
125 T C -0.6390 Soluble
126 V C 0.0000 Buried
127 L C -0.3501 Soluble
128 G C -0.8887 Soluble
129 Q C -1.4080 Soluble
130 P C -1.3947 Soluble
131 K C -2.3314 Soluble
132 A C -1.3725 Soluble
133 A C -0.7753 Soluble
134 P C 0.0000 Buried
135 S C -0.6037 Soluble
136 V C 0.0000 Buried
137 T C -0.4712 Soluble
138 L C -0.4116 Soluble
139 F C 0.0000 Buried
140 P C -0.1666 Soluble
141 P C 0.0000 Buried
142 S C -1.2056 Soluble
143 S C -1.7912 Soluble
144 E C -2.5305 Soluble
145 E C 0.0000 Buried
146 L C -2.1402 Soluble
147 Q C -2.4546 Soluble
148 A C -2.0185 Soluble
149 N C -2.8894 Soluble
150 K C -2.9708 Soluble
151 A C 0.0000 Buried
152 T C 0.0000 Buried
153 L C 0.0000 Buried
154 V C 0.0000 Buried
155 C C 0.0000 Buried
156 L C 0.0000 Buried
157 I C 0.0000 Buried
158 S C -0.5946 Soluble
159 D C -1.5593 Soluble
160 F C 0.0000 Buried
161 Y C 0.0000 Buried
162 P C -0.9877 Soluble
163 G C -0.5713 Soluble
164 A C -0.2165 Soluble
165 V C -0.1470 Soluble
166 T C -0.1024 Soluble
167 V C -0.1054 Soluble
168 A C -0.4775 Soluble
169 W C 0.0000 Buried
170 K C -0.8784 Soluble
171 A C 0.0000 Buried
172 D C -1.3474 Soluble
173 S C -0.9043 Soluble
174 S C -0.7445 Soluble
175 P C -0.8407 Soluble
176 V C -0.8141 Soluble
177 K C -1.6966 Soluble
178 A C -0.9459 Soluble
179 G C -0.9074 Soluble
180 V C -0.6646 Soluble
181 E C -0.7617 Soluble
182 T C -0.1950 Soluble
183 T C 0.0000 Buried
184 T C -0.0983 Soluble
185 P C -0.2502 Soluble
186 S C -0.6412 Soluble
187 K C -1.4502 Soluble
188 Q C -1.6122 Soluble
189 S C -1.6025 Soluble
190 N C -2.3957 Soluble
191 N C -2.6790 Soluble
192 K C -2.1318 Soluble
193 Y C -1.0914 Soluble
194 A C 0.0000 Buried
195 A C 0.0000 Buried
196 S C 0.0000 Buried
197 S C 0.0000 Buried
198 Y C 0.0000 Buried
199 L C 0.0000 Buried
200 S C -0.7324 Soluble
201 L C 0.0000 Buried
202 T C -1.9381 Soluble
203 P C -2.5975 Soluble
204 E C -3.1924 Soluble
205 Q C -2.3275 Soluble
206 W C 0.0000 Buried
207 K C -3.0369 Soluble
208 S C -2.3928 Soluble
209 H C -2.3109 Soluble
210 K C -2.3801 Soluble
211 S C -1.6100 Soluble
212 Y C 0.0000 Buried
213 S C 0.0000 Buried
214 C C 0.0000 Buried
215 Q C -1.0440 Soluble
216 V C 0.0000 Buried
217 T C -0.7040 Soluble
218 H C 0.0000 Buried
219 E C -2.3037 Soluble
220 G C -1.4525 Soluble
221 S C -0.8750 Soluble
222 T C -0.7287 Soluble
223 V C -0.7445 Soluble
224 E C -2.2176 Soluble
225 K C -2.0090 Soluble
226 T C -1.0264 Soluble
227 V C -0.6083 Soluble
228 A C -1.2985 Soluble
229 P C -1.5895 Soluble
230 T C -1.6225 Soluble
231 E C -1.8359 Soluble

3D Structure — colored by A4D score

Sequence - click residue to focus in viewer  |  colored by A4D score
Load structure to view sequence…
Color Legend (B-factor = A4D Score)
Score > 1.5 — highly aggregation-prone
Score 0.5–1.5 — aggregation-prone
Score ≈ 0 — buried
Score −1 to −0.5 — soluble
Score < −2.5 — highly soluble
pH Structure
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A4D Score Threshold
Highlight residues > threshold in the sequence panel
CDR Regions
HCDR1
HCDR2
HCDR3
LCDR1
LCDR2
LCDR3
Display Options

pH-Dependent Aggregation Profiles

A4D scores calculated across 11 pH conditions (4.0–9.0, step 0.5). Click a row to view the structure at that pH. The input structure is globular — max score is recommended for pH analysis.

pH Avg A4D Score Max A4D Score Downloads
4.0 -0.6542 1.8916 CSV PDB
4.5 -0.6934 1.8828 CSV PDB
5.0 -0.7402 1.8735 CSV PDB
5.5 -0.7851 1.8658 CSV PDB
6.0 -0.8173 1.8627 CSV PDB
6.5 -0.8284 1.8666 CSV PDB
7.0 -0.8181 1.8773 CSV PDB
7.5 -0.7936 1.8918 CSV PDB
8.0 -0.7616 1.9078 CSV PDB
8.5 -0.7243 1.9244 CSV PDB
9.0 -0.6818 1.9411 CSV PDB
Average A4D Score vs pH
Max A4D Score vs pH