Anvatabart / 1n8z

A4DAB021_1n8z_B_A | Source PDB: 1n8z | Chains: B, A | Done
100
Yes
10 Å
Yes
Avg A4D Score
-0.73
Max Score
2.0408
Min Score
-3.7169
Total Score
-316.83
Score CDR
-0.5916
Score non-CDR
-0.7468

Calculation Parameters

Chain Sequence(s) EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPDIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC input.pdb
Selected Chain(s) B (Heavy), A (Light)
Distance of Aggregation 10 Å
FoldX Energy Minimization Yes
pH Calculations Yes
Downloads Download all data (.tar.gz)

Aggrescan4D Profile

Aggregation-prone (score > 0)
Soluble (score < 0)
Buried (score = 0)

Per-Residue A4D Scores

Download CSV
Minimum Score -3.7169
Maximum Score 2.0408
Average Score -0.73
Total Score -316.833

Residues with A4D score > 0.0 are highlighted as aggregation-prone.

Index Residue Chain A4D Score Classification
1 E B -2.0147 Soluble
2 V B -1.3066 Soluble
3 Q B -1.2581 Soluble
4 L B 0.0000 Buried
5 V B 0.2660 Aggregation-prone
6 E B 0.0000 Buried
7 S B -0.5979 Soluble
8 G B -0.8851 Soluble
9 G B -0.7617 Soluble
11 G B -0.4382 Soluble
12 L B -0.2076 Soluble
13 V B 0.0000 Buried
14 Q B -1.6939 Soluble
15 P B -1.5472 Soluble
16 G B -1.5144 Soluble
17 G B -1.2339 Soluble
18 S B -1.3403 Soluble
19 L B -1.1558 Soluble
20 R B -1.9798 Soluble
21 L B 0.0000 Buried
22 S B -0.4698 Soluble
23 C B 0.0000 Buried
24 A B -0.3209 Soluble
25 A B 0.0000 Buried
26 S B -1.0819 Soluble
27 G B -1.2491 Soluble
28 F B -1.4297 Soluble
29 N B -2.3730 Soluble
30 I B 0.0000 Buried
35 K B -2.8364 Soluble
36 D B -3.0971 Soluble
37 T B 0.0000 Buried
38 Y B -0.4344 Soluble
39 I B 0.0000 Buried
40 H B 0.0000 Buried
41 W B 0.0000 Buried
42 V B 0.0000 Buried
43 R B 0.0000 Buried
44 Q B -0.8032 Soluble
45 A B -1.1596 Soluble
46 P B -0.9631 Soluble
47 G B -1.4762 Soluble
48 K B -2.4030 Soluble
49 G B -1.6683 Soluble
50 L B 0.0000 Buried
51 E B -1.0752 Soluble
52 W B 0.0000 Buried
53 V B 0.0000 Buried
54 A B 0.0000 Buried
55 R B -0.4041 Soluble
56 I B 0.0000 Buried
57 Y B -0.4073 Soluble
58 P B 0.0000 Buried
59 T B -1.2416 Soluble
62 N B -0.8900 Soluble
63 G B -0.5587 Soluble
64 Y B 0.5830 Aggregation-prone
65 T B -0.2227 Soluble
66 R B -1.4988 Soluble
67 Y B -1.5939 Soluble
68 A B -1.7348 Soluble
69 D B -2.5690 Soluble
70 S B -1.7830 Soluble
71 V B 0.0000 Buried
72 K B -2.7376 Soluble
74 G B -1.7398 Soluble
75 R B -1.3215 Soluble
76 F B 0.0000 Buried
77 T B -1.0306 Soluble
78 I B 0.0000 Buried
79 S B -0.0883 Soluble
80 A B -0.7445 Soluble
81 D B -1.3594 Soluble
82 T B -1.6051 Soluble
83 S B -1.5497 Soluble
84 K B -2.1970 Soluble
85 N B -1.7967 Soluble
86 T B 0.0000 Buried
87 A B 0.0000 Buried
88 Y B -0.4814 Soluble
89 L B 0.0000 Buried
90 Q B -1.2152 Soluble
91 M B 0.0000 Buried
92 N B -1.4952 Soluble
93 S B -1.3481 Soluble
94 L B 0.0000 Buried
95 R B -2.5267 Soluble
96 A B -1.7987 Soluble
97 E B -2.2769 Soluble
98 D B 0.0000 Buried
99 T B -0.7399 Soluble
100 A B 0.0000 Buried
101 V B 0.1554 Aggregation-prone
102 Y B 0.0000 Buried
103 Y B 0.0000 Buried
104 C B 0.0000 Buried
105 S B 0.0000 Buried
106 R B -0.1832 Soluble
107 W B 0.0000 Buried
108 G B 0.0000 Buried
109 G B -1.4158 Soluble
110 D B -2.2338 Soluble
111 G B -1.0730 Soluble
112 F B -0.2066 Soluble
113 Y B 0.3942 Aggregation-prone
114 A B 0.0000 Buried
115 M B 0.0000 Buried
116 D B -0.2693 Soluble
117 Y B -0.5965 Soluble
118 W B -0.6496 Soluble
119 G B 0.0000 Buried
120 Q B -1.5423 Soluble
121 G B -0.7365 Soluble
122 T B -0.1824 Soluble
123 L B 0.0968 Aggregation-prone
124 V B 0.0000 Buried
125 T B 0.0000 Buried
126 V B 0.0000 Buried
127 S B -0.8566 Soluble
128 S B -0.7346 Soluble
129 A B -0.5299 Soluble
130 S B -0.6966 Soluble
131 T B -0.8356 Soluble
132 K B -1.5206 Soluble
133 G B -1.6207 Soluble
134 P B 0.0000 Buried
135 S B -0.5806 Soluble
136 V B 0.0000 Buried
137 F B 0.0000 Buried
138 P B -1.0423 Soluble
139 L B 0.0000 Buried
140 A B -0.7481 Soluble
141 P B 0.0000 Buried
142 S B -0.6676 Soluble
143 S B -0.8399 Soluble
144 K B -1.3150 Soluble
145 S B 0.0000 Buried
146 T B -0.7947 Soluble
147 S B -0.7805 Soluble
148 G B -0.8413 Soluble
149 G B -0.8908 Soluble
150 T B -0.6203 Soluble
151 A B 0.0000 Buried
152 A B 0.0000 Buried
153 L B 0.0000 Buried
154 G B 0.0000 Buried
155 C B 0.0000 Buried
156 L B 0.0000 Buried
157 V B 0.0000 Buried
158 K B 0.0000 Buried
159 D B -0.7304 Soluble
160 Y B 0.0000 Buried
161 F B 0.0000 Buried
162 P B 0.0000 Buried
163 E B -0.4259 Soluble
164 P B -0.6130 Soluble
165 V B -0.4072 Soluble
166 T B -0.5053 Soluble
167 V B -0.2628 Soluble
168 S B -0.3276 Soluble
169 W B 0.0000 Buried
170 N B -0.7325 Soluble
171 S B -0.6426 Soluble
172 G B -0.5031 Soluble
173 A B -0.2369 Soluble
174 L B -0.0115 Soluble
175 T B -0.1762 Soluble
176 S B -0.1817 Soluble
177 G B -0.2140 Soluble
178 V B 0.1614 Aggregation-prone
179 H B -0.3507 Soluble
180 T B -0.1511 Soluble
181 F B 0.0000 Buried
182 P B -0.3732 Soluble
183 A B 0.1898 Aggregation-prone
184 V B 0.4150 Aggregation-prone
185 L B 0.9329 Aggregation-prone
186 Q B 0.1520 Aggregation-prone
187 S B -0.1190 Soluble
188 S B -0.2826 Soluble
189 G B -0.0714 Soluble
190 L B -0.1179 Soluble
191 Y B 0.2867 Aggregation-prone
192 S B 0.0000 Buried
193 L B 0.0000 Buried
194 S B 0.0000 Buried
195 S B 0.0000 Buried
196 V B 0.0000 Buried
197 V B 0.0000 Buried
198 T B -0.1300 Soluble
199 V B 0.0000 Buried
200 P B -0.5805 Soluble
201 S B -0.6149 Soluble
202 S B -0.5228 Soluble
203 S B -0.4937 Soluble
204 L B -0.6209 Soluble
205 G B -0.9567 Soluble
206 T B -0.6565 Soluble
207 Q B -1.0958 Soluble
208 T B -0.9967 Soluble
209 Y B 0.0000 Buried
210 I B -1.1856 Soluble
211 C B 0.0000 Buried
212 N B 0.0000 Buried
213 V B 0.0000 Buried
214 N B -1.7265 Soluble
215 H B 0.0000 Buried
216 K B -2.6941 Soluble
217 P B -1.6230 Soluble
218 S B -1.9188 Soluble
219 N B -2.4183 Soluble
220 T B -2.0726 Soluble
221 K B -2.6642 Soluble
222 V B -1.7286 Soluble
223 D B -2.4762 Soluble
224 K B -2.0832 Soluble
225 K B -2.2059 Soluble
226 V B 0.0000 Buried
227 E B -1.8627 Soluble
228 P B -0.8538 Soluble
1 D A -2.2946 Soluble
2 I A 0.0000 Buried
3 Q A -2.2021 Soluble
4 M A 0.0000 Buried
5 T A -1.3622 Soluble
6 Q A 0.0000 Buried
7 S A -0.8923 Soluble
8 P A -0.6701 Soluble
9 S A -0.9688 Soluble
10 S A -1.0187 Soluble
11 L A -0.8136 Soluble
12 S A -1.2466 Soluble
13 A A -1.1385 Soluble
14 S A -0.9449 Soluble
15 V A 0.2070 Aggregation-prone
16 G A -0.6285 Soluble
17 D A -1.7650 Soluble
18 R A -2.3835 Soluble
19 V A 0.0000 Buried
20 T A -0.6567 Soluble
21 I A 0.0000 Buried
22 T A -0.7295 Soluble
23 C A 0.0000 Buried
24 R A -2.7404 Soluble
25 A A 0.0000 Buried
26 S A -2.3047 Soluble
27 Q A -2.9493 Soluble
28 D A -2.9023 Soluble
29 V A 0.0000 Buried
36 N A -1.8966 Soluble
37 T A -0.9170 Soluble
38 A A -0.0356 Soluble
39 V A 0.0000 Buried
40 A A 0.0000 Buried
41 W A 0.0000 Buried
42 Y A 0.0000 Buried
43 Q A 0.0000 Buried
44 Q A 0.0000 Buried
45 K A -2.0541 Soluble
46 P A -1.5696 Soluble
47 G A -1.7905 Soluble
48 K A -2.6499 Soluble
49 A A -1.7445 Soluble
50 P A 0.0000 Buried
51 K A -1.9510 Soluble
52 L A 0.0000 Buried
53 L A 0.0000 Buried
54 I A 0.0000 Buried
55 Y A 1.0917 Aggregation-prone
56 S A 0.4307 Aggregation-prone
57 A A 0.0000 Buried
65 S A 0.6591 Aggregation-prone
66 F A 2.0408 Aggregation-prone
67 L A 1.3916 Aggregation-prone
68 Y A 0.5428 Aggregation-prone
69 S A -0.0353 Soluble
70 G A -0.4808 Soluble
71 V A 0.0000 Buried
72 P A -0.3853 Soluble
74 S A -0.4009 Soluble
75 R A -0.7252 Soluble
76 F A 0.0000 Buried
77 S A 0.0954 Aggregation-prone
78 G A 0.0759 Aggregation-prone
79 S A -0.6150 Soluble
80 R A -1.6360 Soluble
83 S A -1.1856 Soluble
84 G A -1.7782 Soluble
85 T A -2.1766 Soluble
86 D A -1.7598 Soluble
87 F A 0.0000 Buried
88 T A -0.7366 Soluble
89 L A 0.0000 Buried
90 T A -0.6271 Soluble
91 I A 0.0000 Buried
92 S A -1.4598 Soluble
93 S A -1.1016 Soluble
94 L A 0.0000 Buried
95 Q A -1.0514 Soluble
96 P A -1.7563 Soluble
97 E A -2.2639 Soluble
98 D A 0.0000 Buried
99 F A 0.0000 Buried
100 A A 0.0000 Buried
101 T A 0.0000 Buried
102 Y A 0.0000 Buried
103 Y A 0.0000 Buried
104 C A 0.0000 Buried
105 Q A 0.0000 Buried
106 Q A 0.0000 Buried
107 H A 0.4588 Aggregation-prone
108 Y A 0.6059 Aggregation-prone
109 T A 0.0621 Aggregation-prone
114 T A -0.3128 Soluble
115 P A -0.6642 Soluble
116 P A 0.0000 Buried
117 T A -0.6030 Soluble
118 F A -0.5119 Soluble
119 G A 0.0000 Buried
120 Q A -1.8110 Soluble
121 G A 0.0000 Buried
122 T A 0.0000 Buried
123 K A -2.0362 Soluble
124 V A 0.0000 Buried
125 E A -1.8570 Soluble
126 I A 0.0000 Buried
127 K A -1.6484 Soluble
128 R A -0.9297 Soluble
129 T A 0.1247 Aggregation-prone
130 V A 1.0065 Aggregation-prone
131 A A 0.3494 Aggregation-prone
132 A A 0.1590 Aggregation-prone
133 P A 0.0000 Buried
134 S A -0.1443 Soluble
135 V A 0.0000 Buried
136 F A 0.0000 Buried
137 I A 0.0000 Buried
138 F A 0.0000 Buried
139 P A -0.6402 Soluble
140 P A 0.0000 Buried
141 S A -1.6500 Soluble
142 D A -3.0556 Soluble
143 E A -3.1197 Soluble
144 Q A 0.0000 Buried
145 L A -2.3580 Soluble
146 K A -2.8629 Soluble
147 S A -1.8334 Soluble
148 G A -1.4770 Soluble
149 T A -1.0910 Soluble
150 A A 0.0000 Buried
151 S A 0.0000 Buried
152 V A 0.0000 Buried
153 V A 0.0000 Buried
154 C A 0.0000 Buried
155 L A 0.0000 Buried
156 L A 0.0000 Buried
157 N A 0.0000 Buried
158 N A -0.8503 Soluble
159 F A 0.0000 Buried
160 Y A -0.9323 Soluble
161 P A -1.6300 Soluble
162 R A -2.8787 Soluble
163 E A -3.2349 Soluble
164 A A -2.3853 Soluble
165 K A -2.5362 Soluble
166 V A -1.3702 Soluble
167 Q A -0.9558 Soluble
168 W A 0.0000 Buried
169 K A -1.0194 Soluble
170 V A 0.0000 Buried
171 D A -2.3835 Soluble
172 N A -1.7933 Soluble
173 A A -0.4265 Soluble
174 L A 0.5214 Aggregation-prone
175 Q A -0.2004 Soluble
176 S A -0.5145 Soluble
177 G A -0.8828 Soluble
178 N A -0.7662 Soluble
179 S A -1.1967 Soluble
180 Q A -1.5371 Soluble
181 E A -2.1939 Soluble
182 S A -1.0765 Soluble
183 V A -1.0680 Soluble
184 T A -1.2030 Soluble
185 E A -2.4031 Soluble
186 Q A 0.0000 Buried
187 D A -2.2153 Soluble
188 S A -2.4365 Soluble
189 K A -2.7106 Soluble
190 D A -1.9607 Soluble
191 S A 0.0000 Buried
192 T A 0.0000 Buried
193 Y A 0.0000 Buried
194 S A 0.0000 Buried
195 L A 0.0000 Buried
196 S A 0.0000 Buried
197 S A 0.0000 Buried
198 T A -0.6694 Soluble
199 L A 0.0000 Buried
200 T A -0.4554 Soluble
201 L A -0.7167 Soluble
202 S A -1.1424 Soluble
203 K A -2.2014 Soluble
204 A A -1.9999 Soluble
205 D A -2.6139 Soluble
206 Y A 0.0000 Buried
207 E A -3.6405 Soluble
208 K A -3.7169 Soluble
209 H A -3.2090 Soluble
210 K A -3.4431 Soluble
211 V A -1.7035 Soluble
212 Y A 0.0000 Buried
213 A A 0.0000 Buried
214 C A 0.0000 Buried
215 E A -0.9903 Soluble
216 V A 0.0000 Buried
217 T A -1.2207 Soluble
218 H A 0.0000 Buried
219 Q A -1.6156 Soluble
220 G A -0.1306 Soluble
221 L A -0.0805 Soluble
222 S A -0.4139 Soluble
223 S A -0.4094 Soluble
224 P A -0.6214 Soluble
225 V A -0.0590 Soluble
226 T A -0.5414 Soluble
227 K A -0.8452 Soluble
228 S A -0.8469 Soluble
229 F A 0.0000 Buried
230 N A -1.9892 Soluble
231 R A -2.7814 Soluble
232 G A -2.2389 Soluble
233 E A -2.2809 Soluble
234 C A -0.5915 Soluble

3D Structure — colored by A4D score

Sequence - click residue to focus in viewer  |  colored by A4D score
Load structure to view sequence…
Color Legend (B-factor = A4D Score)
Score > 1.5 — highly aggregation-prone
Score 0.5–1.5 — aggregation-prone
Score ≈ 0 — buried
Score −1 to −0.5 — soluble
Score < −2.5 — highly soluble
pH Structure
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A4D Score Threshold
Highlight residues > threshold in the sequence panel
CDR Regions
HCDR1
HCDR2
HCDR3
LCDR1
LCDR2
LCDR3
Display Options

pH-Dependent Aggregation Profiles

A4D scores calculated across 11 pH conditions (4.0–9.0, step 0.5). Click a row to view the structure at that pH. The input structure is globular — max score is recommended for pH analysis.

pH Avg A4D Score Max A4D Score Downloads
4.0 -0.7579 3.4848 CSV PDB
4.5 -0.8048 3.4848 CSV PDB
5.0 -0.8586 3.4848 CSV PDB
5.5 -0.9087 3.4848 CSV PDB
6.0 -0.9436 3.4848 CSV PDB
6.5 -0.9547 3.4848 CSV PDB
7.0 -0.9425 3.4848 CSV PDB
7.5 -0.9151 3.4848 CSV PDB
8.0 -0.8791 3.4847 CSV PDB
8.5 -0.8362 3.4846 CSV PDB
9.0 -0.7862 3.4842 CSV PDB
Average A4D Score vs pH
Max A4D Score vs pH