Tomuzotuximab / 5icy

A4DAB272_5icy_B_A | Source PDB: 5icy | Chains: B, A | Done
99.56
Yes
10 Å
Yes
Avg A4D Score
-0.6473
Max Score
1.9677
Min Score
-3.4282
Total Score
-277.69
Score CDR
-0.2606
Score non-CDR
-0.6937

Calculation Parameters

Chain Sequence(s) VQLKQSGPGLVQPSQSLSITCTVSGFSLTNYGVHWVRQSPGKGLEWLGVIWSGGNTDYNTPFTSRLSINKDNSKSQVFFKMNSLQSNDTAIYYCARALTYYDYEFAYWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKDILLTQSPVILSVSPGERVSFSCRASQSIGTNIHWYQQRTNGSPRLLIKYASESISGIPSRFSGSGSGTDFTLSINSVESEDIADYYCQQNNNWPTTFGAGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG input.pdb
Selected Chain(s) B (Heavy), A (Light)
Distance of Aggregation 10 Å
FoldX Energy Minimization Yes
pH Calculations Yes
Downloads Download all data (.tar.gz)

Aggrescan4D Profile

Aggregation-prone (score > 0)
Soluble (score < 0)
Buried (score = 0)

Per-Residue A4D Scores

Download CSV
Minimum Score -3.4282
Maximum Score 1.9677
Average Score -0.6473
Total Score -277.6914

Residues with A4D score > 0.0 are highlighted as aggregation-prone.

Index Residue Chain A4D Score Classification
2 V B 0.9662 Aggregation-prone
3 Q B -0.9607 Soluble
4 L B 0.0000 Buried
5 K B -2.3783 Soluble
6 Q B 0.0000 Buried
7 S B -0.8322 Soluble
8 G B -1.0391 Soluble
9 P B -0.3094 Soluble
11 G B -0.2161 Soluble
12 L B 0.3103 Aggregation-prone
13 V B -0.1979 Soluble
15 P B -1.2937 Soluble
16 S B -1.5003 Soluble
17 Q B -1.9214 Soluble
18 S B -1.8801 Soluble
19 L B 0.0000 Buried
20 S B -0.8817 Soluble
21 I B 0.0000 Buried
22 T B -0.5861 Soluble
23 C B 0.0000 Buried
24 T B -1.1859 Soluble
25 V B 0.0000 Buried
26 S B -0.6368 Soluble
27 G B -0.0152 Soluble
28 F B -0.0451 Soluble
29 S B -0.8053 Soluble
30 L B 0.0000 Buried
35 T B -1.0099 Soluble
36 N B -0.9061 Soluble
37 Y B 0.3935 Aggregation-prone
38 G B 0.0000 Buried
39 V B 0.0000 Buried
40 H B 0.0000 Buried
41 W B 0.0000 Buried
42 V B 0.0000 Buried
43 R B 0.0000 Buried
44 Q B -0.4650 Soluble
45 S B -0.9995 Soluble
46 P B -1.1652 Soluble
47 G B -1.7267 Soluble
48 K B -2.2417 Soluble
49 G B -1.1459 Soluble
50 L B 0.0000 Buried
51 E B 0.0000 Buried
52 W B 0.0000 Buried
53 L B 0.0000 Buried
54 G B 0.0000 Buried
55 V B 0.0000 Buried
56 I B 0.0000 Buried
57 W B -0.5653 Soluble
58 S B -0.7582 Soluble
59 G B -1.1779 Soluble
63 G B -1.6580 Soluble
64 N B -1.8742 Soluble
65 T B -1.2986 Soluble
66 D B -0.9838 Soluble
67 Y B -0.4165 Soluble
68 N B -0.1731 Soluble
69 T B -0.2421 Soluble
70 P B -0.4053 Soluble
71 F B 0.0000 Buried
72 T B -0.4939 Soluble
74 S B -0.6819 Soluble
75 R B -1.3366 Soluble
76 L B 0.0000 Buried
77 S B -1.2877 Soluble
78 I B 0.0000 Buried
79 N B -1.8922 Soluble
80 K B -1.6655 Soluble
81 D B -2.0257 Soluble
82 N B -2.6116 Soluble
83 S B -1.8897 Soluble
84 K B -2.5042 Soluble
85 S B -1.7544 Soluble
86 Q B -1.6331 Soluble
87 V B 0.0000 Buried
88 F B -0.4049 Soluble
89 F B 0.0000 Buried
90 K B -2.1148 Soluble
91 M B 0.0000 Buried
92 N B -2.4968 Soluble
93 S B -1.7197 Soluble
94 L B 0.0000 Buried
95 Q B -2.1493 Soluble
96 S B -1.4431 Soluble
97 N B -2.1036 Soluble
98 D B 0.0000 Buried
99 T B -0.5961 Soluble
100 A B 0.0000 Buried
101 I B 0.5364 Aggregation-prone
102 Y B 0.0000 Buried
103 Y B 0.0000 Buried
104 C B 0.0000 Buried
105 A B 0.0000 Buried
106 R B 0.0000 Buried
107 A B 0.0000 Buried
108 L B 1.0428 Aggregation-prone
109 T B 1.1528 Aggregation-prone
110 Y B 1.8630 Aggregation-prone
111 Y B 1.9677 Aggregation-prone
112 D B 0.0000 Buried
113 Y B 0.5946 Aggregation-prone
114 E B 0.0000 Buried
115 F B 0.0000 Buried
116 A B 0.4092 Aggregation-prone
117 Y B 0.4257 Aggregation-prone
118 W B -0.3717 Soluble
119 G B 0.0000 Buried
120 Q B -1.8384 Soluble
121 G B -0.8731 Soluble
122 T B 0.0000 Buried
123 L B 0.2815 Aggregation-prone
124 V B 0.0000 Buried
125 T B -0.1159 Soluble
126 V B 0.0000 Buried
127 S B -0.3330 Soluble
128 A B 0.0209 Aggregation-prone
129 A B -0.0858 Soluble
130 S B -0.3543 Soluble
131 T B -0.6759 Soluble
132 K B -1.1857 Soluble
133 G B -1.2556 Soluble
134 P B 0.0000 Buried
135 S B -0.2718 Soluble
136 V B 0.0000 Buried
137 F B 0.0000 Buried
138 P B -1.1755 Soluble
139 L B 0.0000 Buried
140 A B -1.3218 Soluble
141 P B 0.0000 Buried
142 S B -1.1634 Soluble
143 S B -0.9136 Soluble
144 K B -1.1315 Soluble
145 S B 0.0000 Buried
146 T B -0.7342 Soluble
147 S B -0.8136 Soluble
148 G B -0.8440 Soluble
149 G B -0.9026 Soluble
150 T B -0.6292 Soluble
151 A B 0.0000 Buried
152 A B 0.0000 Buried
153 L B 0.0000 Buried
154 G B 0.0000 Buried
155 C B 0.0000 Buried
156 L B 0.0000 Buried
157 V B 0.0000 Buried
158 K B 0.0000 Buried
159 D B -0.3756 Soluble
160 Y B 0.0000 Buried
161 F B 0.0000 Buried
162 P B 0.0000 Buried
163 E B -0.1905 Soluble
164 P B -0.4456 Soluble
165 V B -0.4966 Soluble
166 T B -0.4876 Soluble
167 V B -0.0940 Soluble
168 S B -0.2911 Soluble
169 W B 0.0000 Buried
170 N B -0.7444 Soluble
171 S B -0.5330 Soluble
172 G B -0.5201 Soluble
173 A B -0.2048 Soluble
174 L B 0.0308 Aggregation-prone
175 T B -0.1350 Soluble
176 S B -0.1557 Soluble
177 G B -0.1742 Soluble
178 V B 0.2021 Aggregation-prone
179 H B -0.3184 Soluble
180 T B 0.0198 Aggregation-prone
181 F B 0.0000 Buried
182 P B -0.5046 Soluble
183 A B 0.2546 Aggregation-prone
184 V B 0.5203 Aggregation-prone
185 L B 1.3947 Aggregation-prone
186 Q B 0.2922 Aggregation-prone
187 S B -0.0510 Soluble
188 S B -0.1898 Soluble
189 G B 0.1077 Aggregation-prone
190 L B 0.2450 Aggregation-prone
191 Y B 0.5696 Aggregation-prone
192 S B 0.2641 Aggregation-prone
193 L B 0.0000 Buried
194 S B 0.0000 Buried
195 S B 0.0000 Buried
196 V B 0.0000 Buried
197 V B 0.0000 Buried
198 T B -0.1062 Soluble
199 V B 0.0000 Buried
200 P B -0.5406 Soluble
201 S B -0.5771 Soluble
202 S B -0.5838 Soluble
203 S B -0.6165 Soluble
204 L B -0.7593 Soluble
205 G B -0.9372 Soluble
206 T B -0.7329 Soluble
207 Q B -1.2529 Soluble
208 T B -1.2239 Soluble
209 Y B 0.0000 Buried
210 I B -1.2022 Soluble
211 C B 0.0000 Buried
212 N B -1.1498 Soluble
213 V B 0.0000 Buried
214 N B -1.7181 Soluble
215 H B 0.0000 Buried
216 K B -2.0820 Soluble
217 P B -1.2062 Soluble
218 S B -1.5546 Soluble
219 N B -2.2894 Soluble
220 T B -1.8992 Soluble
221 K B -2.4061 Soluble
222 V B -1.2898 Soluble
223 D B -1.5979 Soluble
224 K B -1.8348 Soluble
225 R B -2.5265 Soluble
226 V B 0.0000 Buried
227 E B -2.8866 Soluble
228 P B -1.8785 Soluble
229 K B -2.2558 Soluble
1 D A -1.3973 Soluble
2 I A 0.0000 Buried
3 L A 0.6758 Aggregation-prone
4 L A 0.0000 Buried
5 T A -0.1839 Soluble
6 Q A 0.0583 Aggregation-prone
7 S A 0.1719 Aggregation-prone
8 P A 0.8084 Aggregation-prone
9 V A 1.8383 Aggregation-prone
10 I A 1.2466 Aggregation-prone
11 L A 0.5483 Aggregation-prone
12 S A -0.3449 Soluble
13 V A -1.1369 Soluble
14 S A -1.7578 Soluble
15 P A -1.9153 Soluble
16 G A -2.2417 Soluble
17 E A -3.0406 Soluble
18 R A -3.4282 Soluble
19 V A 0.0000 Buried
20 S A -0.6722 Soluble
21 F A 0.0000 Buried
22 S A -0.5571 Soluble
23 C A 0.0000 Buried
24 R A -1.8448 Soluble
25 A A -0.9793 Soluble
26 S A -0.8676 Soluble
27 Q A -1.5260 Soluble
28 S A -1.4264 Soluble
29 I A 0.0000 Buried
36 G A -0.9839 Soluble
37 T A -0.7434 Soluble
38 N A -0.7889 Soluble
39 I A 0.0000 Buried
40 H A 0.0000 Buried
41 W A 0.0000 Buried
42 Y A 0.0000 Buried
43 Q A 0.0000 Buried
44 Q A -1.2142 Soluble
45 R A -1.8278 Soluble
46 T A -1.6728 Soluble
47 N A -1.9598 Soluble
48 G A -1.4740 Soluble
49 S A -0.9401 Soluble
50 P A 0.0000 Buried
51 R A -0.7208 Soluble
52 L A 0.0000 Buried
53 L A 0.0000 Buried
54 I A 0.0000 Buried
55 K A -0.7600 Soluble
56 Y A -0.5970 Soluble
57 A A 0.0000 Buried
65 S A -1.2713 Soluble
66 E A -2.0155 Soluble
67 S A -1.2036 Soluble
68 I A -0.5431 Soluble
69 S A -0.3419 Soluble
70 G A -0.4715 Soluble
71 I A -0.2769 Soluble
72 P A -0.3518 Soluble
74 S A -0.6752 Soluble
75 R A -1.3489 Soluble
76 F A 0.0000 Buried
77 S A -0.9837 Soluble
78 G A 0.0000 Buried
79 S A -0.7863 Soluble
80 G A -0.9256 Soluble
83 S A -0.9932 Soluble
84 G A -1.1898 Soluble
85 T A -1.5869 Soluble
86 D A -2.0147 Soluble
87 F A 0.0000 Buried
88 T A -0.6772 Soluble
89 L A 0.0000 Buried
90 S A -0.9526 Soluble
91 I A 0.0000 Buried
92 N A -2.8772 Soluble
93 S A -2.5906 Soluble
94 V A 0.0000 Buried
95 E A -2.6580 Soluble
96 S A -2.3840 Soluble
97 E A -2.2786 Soluble
98 D A 0.0000 Buried
99 I A -1.5526 Soluble
100 A A 0.0000 Buried
101 D A -0.8024 Soluble
102 Y A 0.0000 Buried
103 Y A 0.0000 Buried
104 C A 0.0000 Buried
105 Q A 0.0000 Buried
106 Q A 0.0000 Buried
107 N A -0.5619 Soluble
108 N A -1.1082 Soluble
109 N A -0.9255 Soluble
114 W A 0.1997 Aggregation-prone
115 P A 0.0000 Buried
116 T A 0.0000 Buried
117 T A 0.0118 Aggregation-prone
118 F A 0.2090 Aggregation-prone
119 G A 0.0000 Buried
120 A A 0.0845 Aggregation-prone
121 G A 0.0553 Aggregation-prone
122 T A 0.0000 Buried
123 K A -0.2949 Soluble
124 L A 0.0000 Buried
125 E A -1.0850 Soluble
126 L A 0.0000 Buried
127 K A -1.5157 Soluble
128 R A -1.0645 Soluble
129 T A 0.2103 Aggregation-prone
130 V A 1.0441 Aggregation-prone
131 A A 0.3069 Aggregation-prone
132 A A 0.0860 Aggregation-prone
133 P A 0.0000 Buried
134 S A -0.1733 Soluble
135 V A -0.1964 Soluble
136 F A 0.0000 Buried
137 I A 0.0000 Buried
138 F A 0.0000 Buried
139 P A -0.7286 Soluble
140 P A 0.0000 Buried
141 S A -1.7307 Soluble
142 D A -2.8166 Soluble
143 E A -2.6496 Soluble
144 Q A 0.0000 Buried
145 L A -2.1789 Soluble
146 K A -2.6956 Soluble
147 S A -1.6463 Soluble
148 G A -1.3031 Soluble
149 T A -0.7718 Soluble
150 A A 0.0000 Buried
151 S A 0.0000 Buried
152 V A 0.0000 Buried
153 V A 0.0000 Buried
154 C A 0.0000 Buried
155 L A 0.0000 Buried
156 L A 0.0000 Buried
157 N A 0.0000 Buried
158 N A -0.9719 Soluble
159 F A 0.0000 Buried
160 Y A -0.9017 Soluble
161 P A -1.5407 Soluble
162 R A -2.8706 Soluble
163 E A -3.2465 Soluble
164 A A -2.2992 Soluble
165 K A -2.2255 Soluble
166 V A -1.1208 Soluble
167 Q A -0.7911 Soluble
168 W A 0.0000 Buried
169 K A -0.7846 Soluble
170 V A 0.0000 Buried
171 D A -1.5937 Soluble
172 N A -1.3091 Soluble
173 A A -0.3300 Soluble
174 L A 0.5173 Aggregation-prone
175 Q A -0.3554 Soluble
176 S A -0.4981 Soluble
177 G A -0.9806 Soluble
178 N A -0.9369 Soluble
179 S A -1.2729 Soluble
180 Q A -1.6746 Soluble
181 E A -2.0911 Soluble
182 S A -1.1462 Soluble
183 V A -0.9722 Soluble
184 T A -1.2244 Soluble
185 E A -2.4325 Soluble
186 Q A 0.0000 Buried
187 D A -2.1124 Soluble
188 S A -2.4112 Soluble
189 K A -2.8089 Soluble
190 D A -2.2026 Soluble
191 S A 0.0000 Buried
192 T A 0.0000 Buried
193 Y A 0.0000 Buried
194 S A 0.0000 Buried
195 L A 0.0000 Buried
196 S A 0.0000 Buried
197 S A 0.0000 Buried
198 T A -0.7912 Soluble
199 L A 0.0000 Buried
200 T A -0.3302 Soluble
201 L A -0.3056 Soluble
202 S A -0.6571 Soluble
203 K A -1.6107 Soluble
204 A A -1.3342 Soluble
206 Y A 0.0000 Buried
207 E A -3.3174 Soluble
208 K A -3.2973 Soluble
209 H A -2.9335 Soluble
210 K A -3.1492 Soluble
211 V A -1.5723 Soluble
212 Y A 0.0000 Buried
213 A A -0.9239 Soluble
214 C A 0.0000 Buried
215 E A -0.9943 Soluble
216 V A 0.0000 Buried
217 T A -1.2415 Soluble
218 H A 0.0000 Buried
219 Q A -1.6122 Soluble
220 G A -0.2133 Soluble
221 L A -0.1157 Soluble
222 S A -0.4317 Soluble
223 S A -0.4184 Soluble
224 P A -0.5876 Soluble
225 V A -0.0053 Soluble
226 T A -0.3871 Soluble
227 K A -0.7050 Soluble
228 S A -0.8455 Soluble
229 F A 0.0000 Buried
230 N A -2.0827 Soluble
231 R A -2.4426 Soluble
232 G A -1.3025 Soluble

3D Structure — colored by A4D score

Sequence - click residue to focus in viewer  |  colored by A4D score
Load structure to view sequence…
Color Legend (B-factor = A4D Score)
Score > 1.5 — highly aggregation-prone
Score 0.5–1.5 — aggregation-prone
Score ≈ 0 — buried
Score −1 to −0.5 — soluble
Score < −2.5 — highly soluble
pH Structure
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A4D Score Threshold
Highlight residues > threshold in the sequence panel
CDR Regions
HCDR1
HCDR2
HCDR3
LCDR1
LCDR2
LCDR3
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pH-Dependent Aggregation Profiles

A4D scores calculated across 11 pH conditions (4.0–9.0, step 0.5). Click a row to view the structure at that pH. The input structure is globular — max score is recommended for pH analysis.

pH Avg A4D Score Max A4D Score Downloads
4.0 -0.6973 2.7328 CSV PDB
4.5 -0.7312 2.6581 CSV PDB
5.0 -0.7717 2.5745 CSV PDB
5.5 -0.8098 2.4876 CSV PDB
6.0 -0.8348 2.3996 CSV PDB
6.5 -0.8383 2.3115 CSV PDB
7.0 -0.8207 2.2237 CSV PDB
7.5 -0.7896 2.1698 CSV PDB
8.0 -0.7517 2.1692 CSV PDB
8.5 -0.7095 2.1671 CSV PDB
9.0 -0.6635 2.2068 CSV PDB
Average A4D Score vs pH
Max A4D Score vs pH