Zenocutuzumab / 5o7p

A4DAB306_5o7p_B_A | Source PDB: 5o7p | Chains: B, A | Done
100
Yes
10 Å
Yes
Avg A4D Score
-0.6778
Max Score
1.9369
Min Score
-3.7717
Total Score
-292.14
Score CDR
-0.175
Score non-CDR
-0.7453

Calculation Parameters

Chain Sequence(s) QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARDHGSRHFWSYWGFDYWGQGTLVTVSSASTKGPSVFPLAPSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPDIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE input.pdb
Selected Chain(s) B (Heavy), A (Light)
Distance of Aggregation 10 Å
FoldX Energy Minimization Yes
pH Calculations Yes
Downloads Download all data (.tar.gz)

Aggrescan4D Profile

Aggregation-prone (score > 0)
Soluble (score < 0)
Buried (score = 0)

Per-Residue A4D Scores

Download CSV
Minimum Score -3.7717
Maximum Score 1.9369
Average Score -0.6778
Total Score -292.1354

Residues with A4D score > 0.0 are highlighted as aggregation-prone.

Index Residue Chain A4D Score Classification
1 Q B -1.3872 Soluble
2 V B -0.7230 Soluble
3 Q B -0.9075 Soluble
4 L B 0.0000 Buried
5 V B 0.3405 Aggregation-prone
6 Q B 0.0000 Buried
7 S B -0.5615 Soluble
8 G B -0.5572 Soluble
9 A B -0.2321 Soluble
11 E B -0.4616 Soluble
12 V B 0.0490 Aggregation-prone
13 K B -1.3051 Soluble
14 K B -2.3133 Soluble
15 P B -2.5521 Soluble
16 G B -2.1792 Soluble
17 A B -1.5131 Soluble
18 S B -1.7752 Soluble
19 V B 0.0000 Buried
20 K B -2.1090 Soluble
21 V B 0.0000 Buried
22 S B -0.6634 Soluble
23 C B 0.0000 Buried
24 K B -0.5039 Soluble
25 A B 0.0000 Buried
26 S B -0.4758 Soluble
27 G B -0.9081 Soluble
28 Y B -0.3048 Soluble
29 T B -0.0563 Soluble
30 F B 0.0000 Buried
35 T B -0.6437 Soluble
36 G B -0.6242 Soluble
37 Y B -0.3819 Soluble
38 Y B -0.2856 Soluble
39 M B 0.0000 Buried
40 H B 0.0000 Buried
41 W B 0.0000 Buried
42 V B 0.0000 Buried
43 R B 0.0000 Buried
44 Q B -0.5381 Soluble
45 A B -0.9490 Soluble
46 P B -0.8470 Soluble
47 G B -1.2897 Soluble
48 Q B -1.8455 Soluble
49 G B -1.3306 Soluble
50 L B -0.6878 Soluble
51 E B -0.5410 Soluble
52 W B 0.0000 Buried
53 M B 0.0000 Buried
54 G B 0.0000 Buried
55 W B 0.0261 Aggregation-prone
56 I B 0.0000 Buried
57 N B -0.8509 Soluble
58 P B 0.0000 Buried
59 N B -1.6590 Soluble
62 S B -1.1458 Soluble
63 G B -1.0736 Soluble
64 G B -0.8259 Soluble
65 T B -0.3601 Soluble
66 N B -0.5889 Soluble
67 Y B -0.9924 Soluble
68 A B 0.0000 Buried
69 Q B -2.5147 Soluble
70 K B -2.7062 Soluble
71 F B 0.0000 Buried
72 Q B -2.4174 Soluble
74 G B -1.8196 Soluble
75 R B -1.6756 Soluble
76 V B 0.0000 Buried
77 T B -0.8140 Soluble
78 M B 0.0000 Buried
79 T B -0.6078 Soluble
80 R B -1.0135 Soluble
81 D B -0.8322 Soluble
82 T B -0.3637 Soluble
83 S B 0.2029 Aggregation-prone
84 I B 0.9310 Aggregation-prone
85 S B 0.0446 Aggregation-prone
86 T B 0.0000 Buried
87 A B 0.0000 Buried
88 Y B -0.8192 Soluble
89 M B 0.0000 Buried
90 E B -1.7573 Soluble
91 L B 0.0000 Buried
92 S B -1.9148 Soluble
93 R B -2.6859 Soluble
94 L B 0.0000 Buried
95 R B -3.4721 Soluble
96 S B -2.4146 Soluble
97 D B -2.5298 Soluble
98 D B 0.0000 Buried
99 T B -0.8395 Soluble
100 A B 0.0000 Buried
101 V B 0.2067 Aggregation-prone
102 Y B 0.0000 Buried
103 Y B 0.0000 Buried
104 C B 0.0000 Buried
105 A B 0.0000 Buried
106 R B 0.0000 Buried
107 D B 0.0000 Buried
108 H B -0.3133 Soluble
109 G B -0.2133 Soluble
110 S B -0.6997 Soluble
111 R B -1.0846 Soluble
111A H B 0.3184 Aggregation-prone
111B F B 1.9369 Aggregation-prone
112B W B 1.6232 Aggregation-prone
112A S B 0.0000 Buried
112 Y B 1.1425 Aggregation-prone
113 W B 0.7769 Aggregation-prone
114 G B 0.0000 Buried
115 F B 0.0000 Buried
116 D B -0.2747 Soluble
117 Y B 0.1643 Aggregation-prone
118 W B -0.2539 Soluble
119 G B 0.0000 Buried
120 Q B -1.3561 Soluble
121 G B -0.7054 Soluble
122 T B 0.0000 Buried
123 L B 0.0722 Aggregation-prone
124 V B 0.0000 Buried
125 T B 0.0000 Buried
126 V B 0.0000 Buried
127 S B -1.3220 Soluble
128 S B -1.2244 Soluble
129 A B -0.7167 Soluble
130 S B -0.7032 Soluble
131 T B -0.5804 Soluble
132 K B -1.2055 Soluble
133 G B -1.3726 Soluble
134 P B -0.6359 Soluble
135 S B -0.4042 Soluble
136 V B 0.0000 Buried
137 F B 0.0000 Buried
138 P B -1.1934 Soluble
139 L B 0.0000 Buried
140 A B -0.6448 Soluble
141 P B -0.4179 Soluble
142 S B -0.2110 Soluble
143 G B -0.6318 Soluble
144 T B -0.4257 Soluble
145 A B 0.0000 Buried
146 A B 0.0000 Buried
147 L B 0.0000 Buried
148 G B 0.0000 Buried
149 C B 0.0000 Buried
150 L B 0.0000 Buried
151 V B 0.0000 Buried
152 K B 0.0000 Buried
153 D B -0.4451 Soluble
154 Y B 0.0000 Buried
155 F B 0.0000 Buried
156 P B 0.0000 Buried
157 E B -0.8221 Soluble
158 P B -0.8680 Soluble
159 V B -0.5616 Soluble
160 T B -0.6081 Soluble
161 V B -0.2697 Soluble
162 S B -0.3625 Soluble
163 W B 0.0000 Buried
164 N B -0.7237 Soluble
165 S B -0.6174 Soluble
166 G B -0.4241 Soluble
167 A B -0.1853 Soluble
168 L B 0.0164 Aggregation-prone
169 T B -0.1546 Soluble
170 S B -0.2184 Soluble
171 G B -0.2894 Soluble
172 V B 0.1397 Aggregation-prone
173 H B -0.2364 Soluble
174 T B -0.0015 Soluble
175 F B 0.0000 Buried
176 P B -0.2990 Soluble
177 A B 0.1389 Aggregation-prone
178 V B 0.4006 Aggregation-prone
179 L B 1.1811 Aggregation-prone
180 Q B 0.2236 Aggregation-prone
181 S B -0.0561 Soluble
182 S B -0.2177 Soluble
183 G B 0.0331 Aggregation-prone
184 L B 0.0447 Aggregation-prone
185 Y B 0.0000 Buried
186 S B 0.0000 Buried
187 L B 0.0000 Buried
188 S B 0.0000 Buried
189 S B 0.0000 Buried
190 V B 0.0000 Buried
191 V B 0.0000 Buried
192 T B -0.1559 Soluble
193 V B 0.0000 Buried
194 P B -0.4385 Soluble
195 S B -0.4620 Soluble
196 S B -0.5789 Soluble
197 S B -0.5966 Soluble
198 L B -0.6775 Soluble
199 G B -1.1126 Soluble
200 T B -0.8538 Soluble
201 Q B -1.3192 Soluble
202 T B -1.2866 Soluble
203 Y B 0.0000 Buried
204 I B -1.4020 Soluble
205 C B 0.0000 Buried
206 N B -1.5709 Soluble
207 V B 0.0000 Buried
208 N B -2.0311 Soluble
209 H B 0.0000 Buried
210 K B -2.7379 Soluble
211 P B -1.5736 Soluble
212 S B -1.7965 Soluble
213 N B -2.5627 Soluble
214 T B -2.0756 Soluble
215 K B -2.7490 Soluble
216 V B -1.6264 Soluble
217 D B -2.6635 Soluble
218 K B -2.1880 Soluble
219 R B -2.7877 Soluble
220 V B 0.0000 Buried
221 E B -2.4450 Soluble
222 P B -1.1987 Soluble
1 D A -2.3424 Soluble
2 I A 0.0000 Buried
3 Q A -2.3533 Soluble
4 M A 0.0000 Buried
5 T A -1.4565 Soluble
6 Q A 0.0000 Buried
7 S A -0.7486 Soluble
8 P A -0.6524 Soluble
9 S A -0.9284 Soluble
10 S A -0.8766 Soluble
11 L A -0.6974 Soluble
12 S A -1.0225 Soluble
13 A A 0.0000 Buried
14 S A -0.6812 Soluble
15 V A 0.4471 Aggregation-prone
16 G A -0.7332 Soluble
17 D A -1.6242 Soluble
18 R A -2.2960 Soluble
19 V A 0.0000 Buried
20 T A -0.5825 Soluble
21 I A 0.0000 Buried
22 T A -0.8347 Soluble
23 C A 0.0000 Buried
24 R A -2.6290 Soluble
25 A A -1.9629 Soluble
26 S A -1.9216 Soluble
27 Q A -1.9380 Soluble
28 S A -1.0743 Soluble
29 I A 0.0000 Buried
36 S A -0.1823 Soluble
37 S A 0.0622 Aggregation-prone
38 Y A 0.6706 Aggregation-prone
39 L A 0.0000 Buried
40 N A 0.0000 Buried
41 W A 0.0000 Buried
42 Y A 0.0000 Buried
43 Q A 0.0000 Buried
44 Q A 0.0000 Buried
45 K A -1.6960 Soluble
46 P A -1.5234 Soluble
47 G A -1.7277 Soluble
48 K A -2.5703 Soluble
49 A A -1.5589 Soluble
50 P A 0.0000 Buried
51 K A -1.4723 Soluble
52 L A 0.0000 Buried
53 L A 0.0000 Buried
54 I A 0.0000 Buried
55 Y A 0.3846 Aggregation-prone
56 A A 0.2417 Aggregation-prone
57 A A 0.0000 Buried
65 S A -0.1892 Soluble
66 S A 0.0987 Aggregation-prone
67 L A 0.3296 Aggregation-prone
68 Q A -0.2541 Soluble
69 S A -0.4010 Soluble
70 G A -0.4864 Soluble
71 V A -0.3279 Soluble
72 P A -0.3270 Soluble
74 S A -0.4417 Soluble
75 R A -0.8007 Soluble
76 F A 0.0000 Buried
77 S A -0.2777 Soluble
78 G A -0.2848 Soluble
79 S A -0.6475 Soluble
80 G A -0.9892 Soluble
83 S A -0.9284 Soluble
84 G A -1.0548 Soluble
85 T A -1.6324 Soluble
86 D A -2.0329 Soluble
87 F A 0.0000 Buried
88 T A -0.7453 Soluble
89 L A 0.0000 Buried
90 T A -0.6016 Soluble
91 I A 0.0000 Buried
92 S A -1.3526 Soluble
93 S A -1.1069 Soluble
94 L A 0.0000 Buried
95 Q A -0.9530 Soluble
96 P A -1.1710 Soluble
97 E A -2.0763 Soluble
98 D A 0.0000 Buried
99 F A -0.6774 Soluble
100 A A -0.8636 Soluble
101 T A 0.0000 Buried
102 Y A 0.0000 Buried
103 Y A 0.0000 Buried
104 C A 0.0000 Buried
105 Q A 0.0000 Buried
106 Q A 0.0000 Buried
107 S A 0.0000 Buried
108 Y A 1.0109 Aggregation-prone
109 S A -0.0120 Soluble
114 T A -0.1551 Soluble
115 P A -0.8049 Soluble
116 P A 0.0000 Buried
117 T A -0.8094 Soluble
118 F A 0.0000 Buried
119 G A 0.0000 Buried
120 Q A -1.8256 Soluble
121 G A -1.2841 Soluble
122 T A 0.0000 Buried
123 K A -1.7003 Soluble
124 V A 0.0000 Buried
125 E A -1.5021 Soluble
126 I A -0.9244 Soluble
127 K A -1.5571 Soluble
128 R A -1.2561 Soluble
129 T A 0.0363 Aggregation-prone
130 V A 0.9846 Aggregation-prone
131 A A 0.3694 Aggregation-prone
132 A A 0.0331 Aggregation-prone
133 P A 0.0000 Buried
134 S A -0.0291 Soluble
135 V A 0.0811 Aggregation-prone
136 F A 0.0967 Aggregation-prone
137 I A 0.0000 Buried
138 F A 0.0000 Buried
139 P A -0.7399 Soluble
140 P A 0.0000 Buried
141 S A -1.5133 Soluble
142 D A -2.8387 Soluble
143 E A -2.7647 Soluble
144 Q A 0.0000 Buried
145 L A -1.9492 Soluble
146 K A -2.6926 Soluble
147 S A -1.6566 Soluble
148 G A -1.2797 Soluble
149 T A -1.0558 Soluble
150 A A 0.0000 Buried
151 S A 0.0000 Buried
152 V A 0.0000 Buried
153 V A 0.0000 Buried
154 C A 0.0000 Buried
155 L A 0.0000 Buried
156 L A 0.0000 Buried
157 N A 0.0000 Buried
158 N A -0.8461 Soluble
159 F A 0.0000 Buried
160 Y A 0.0000 Buried
161 P A -1.7647 Soluble
162 R A -3.0552 Soluble
163 E A -3.2057 Soluble
164 A A -2.3960 Soluble
165 K A -2.5428 Soluble
166 V A 0.0000 Buried
167 Q A -1.3797 Soluble
168 W A 0.0000 Buried
169 K A -0.8868 Soluble
170 V A 0.0000 Buried
171 D A -1.7709 Soluble
172 N A -1.3430 Soluble
173 A A -0.3277 Soluble
174 L A 0.6198 Aggregation-prone
175 Q A -0.3818 Soluble
176 S A -0.8201 Soluble
177 G A -1.2346 Soluble
178 N A -1.4807 Soluble
179 S A -1.6423 Soluble
180 Q A -1.8220 Soluble
181 E A -2.0712 Soluble
182 S A -0.7912 Soluble
183 V A -0.8033 Soluble
184 T A -1.1378 Soluble
185 E A -2.3440 Soluble
186 Q A -2.1450 Soluble
187 D A -2.3100 Soluble
188 S A -1.9007 Soluble
189 K A -2.5497 Soluble
190 D A -2.1736 Soluble
191 S A 0.0000 Buried
192 T A 0.0000 Buried
193 Y A 0.0000 Buried
194 S A 0.0000 Buried
195 L A 0.0000 Buried
196 S A 0.0000 Buried
197 S A 0.0000 Buried
198 T A -0.8395 Soluble
199 L A 0.0000 Buried
200 T A -0.4967 Soluble
201 L A -0.5251 Soluble
202 S A -0.9904 Soluble
203 K A -1.9709 Soluble
204 A A -1.8339 Soluble
205 D A -2.4696 Soluble
206 Y A 0.0000 Buried
207 E A -3.7717 Soluble
208 K A -3.7152 Soluble
209 H A -3.0664 Soluble
210 K A -3.1485 Soluble
211 V A -1.3995 Soluble
212 Y A 0.0000 Buried
213 A A 0.0000 Buried
214 C A 0.0000 Buried
215 E A -1.2464 Soluble
216 V A 0.0000 Buried
217 T A -1.3659 Soluble
218 H A 0.0000 Buried
219 Q A -1.6112 Soluble
220 G A -0.2467 Soluble
221 L A -0.1625 Soluble
222 S A -0.4244 Soluble
223 S A -0.3733 Soluble
224 P A -0.5203 Soluble
225 V A 0.0818 Aggregation-prone
226 T A -0.5677 Soluble
227 K A -0.7423 Soluble
228 S A -0.4860 Soluble
229 F A -1.0016 Soluble
230 N A -1.9889 Soluble
231 R A -2.7349 Soluble
232 G A -2.2342 Soluble
233 E A -2.5865 Soluble

3D Structure — colored by A4D score

Sequence - click residue to focus in viewer  |  colored by A4D score
Load structure to view sequence…
Color Legend (B-factor = A4D Score)
Score > 1.5 — highly aggregation-prone
Score 0.5–1.5 — aggregation-prone
Score ≈ 0 — buried
Score −1 to −0.5 — soluble
Score < −2.5 — highly soluble
pH Structure
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A4D Score Threshold
Highlight residues > threshold in the sequence panel
CDR Regions
HCDR1
HCDR2
HCDR3
LCDR1
LCDR2
LCDR3
Display Options

pH-Dependent Aggregation Profiles

A4D scores calculated across 11 pH conditions (4.0–9.0, step 0.5). Click a row to view the structure at that pH. The input structure is globular — max score is recommended for pH analysis.

pH Avg A4D Score Max A4D Score Downloads
4.0 -0.7357 4.4582 CSV PDB
4.5 -0.7737 4.46 CSV PDB
5.0 -0.8166 4.4648 CSV PDB
5.5 -0.8559 4.4746 CSV PDB
6.0 -0.882 4.4883 CSV PDB
6.5 -0.8879 4.5004 CSV PDB
7.0 -0.8736 4.5073 CSV PDB
7.5 -0.8458 4.5102 CSV PDB
8.0 -0.8098 4.5112 CSV PDB
8.5 -0.7674 4.5114 CSV PDB
9.0 -0.7189 4.5114 CSV PDB
Average A4D Score vs pH
Max A4D Score vs pH