Bimagrumab / 5nhw

A4DAB047_5nhw_H_L | Source PDB: 5nhw | Chains: H, L | Done
100
Yes
10 Å
Yes
Avg A4D Score
-0.6214
Max Score
1.3448
Min Score
-3.3332
Total Score
-264.1
Score CDR
0.0041
Score non-CDR
-0.6992

Calculation Parameters

Chain Sequence(s) VQLVQSGAEVKKPGASVKVSCKASGYTFTSSYINWVRQAPGQGLEWMGTINPVSGSTSYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARGGWFDYWGQGTLVTVSSASTKGPSVFPLAPTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSEFSALTQPASVSGSPGQSITISCTGTSSDVGSYNYVNWYQQHPGKAPKLMIYGVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCGTFAGGSYYGVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEA input.pdb
Selected Chain(s) H (Heavy), L (Light)
Distance of Aggregation 10 Å
FoldX Energy Minimization Yes
pH Calculations Yes
Downloads Download all data (.tar.gz)

Aggrescan4D Profile

Aggregation-prone (score > 0)
Soluble (score < 0)
Buried (score = 0)

Per-Residue A4D Scores

Download CSV
Minimum Score -3.3332
Maximum Score 1.3448
Average Score -0.6214
Total Score -264.1031

Residues with A4D score > 0.0 are highlighted as aggregation-prone.

Index Residue Chain A4D Score Classification
2 V H 0.4935 Aggregation-prone
3 Q H -0.5640 Soluble
4 L H 0.0000 Buried
5 V H -0.1765 Soluble
6 Q H 0.0000 Buried
7 S H -0.6674 Soluble
8 G H -0.5862 Soluble
9 A H 0.0742 Aggregation-prone
11 E H -0.2091 Soluble
12 V H 0.8959 Aggregation-prone
13 K H -0.8234 Soluble
14 K H -2.1565 Soluble
15 P H -2.2245 Soluble
16 G H -1.9557 Soluble
17 A H -1.3998 Soluble
18 S H -1.7522 Soluble
19 V H 0.0000 Buried
20 K H -2.1060 Soluble
21 V H 0.0000 Buried
22 S H -0.7342 Soluble
23 C H 0.0000 Buried
24 K H -0.9323 Soluble
25 A H 0.0000 Buried
26 S H -0.2831 Soluble
27 G H -0.2403 Soluble
28 Y H 0.0234 Aggregation-prone
29 T H -0.0518 Soluble
30 F H 0.0000 Buried
35 T H 0.3437 Aggregation-prone
36 S H 0.0599 Aggregation-prone
37 S H 0.1271 Aggregation-prone
38 Y H 0.1719 Aggregation-prone
39 I H 0.0000 Buried
40 N H 0.0000 Buried
41 W H 0.0000 Buried
42 V H 0.0000 Buried
43 R H 0.0000 Buried
44 Q H -0.5436 Soluble
45 A H -0.9471 Soluble
46 P H -0.8133 Soluble
47 G H -1.2712 Soluble
48 Q H -1.7370 Soluble
49 G H -1.1482 Soluble
50 L H 0.0000 Buried
51 E H -0.7011 Soluble
52 W H 0.0000 Buried
53 M H 0.0000 Buried
54 G H 0.0000 Buried
55 T H 0.0000 Buried
56 I H 0.0000 Buried
57 N H -0.1097 Soluble
58 P H 0.0000 Buried
59 V H 1.3202 Aggregation-prone
62 S H 0.3410 Aggregation-prone
63 G H -0.1506 Soluble
64 S H -0.2698 Soluble
65 T H -0.2804 Soluble
66 S H -0.1374 Soluble
67 Y H -0.6008 Soluble
68 A H 0.0000 Buried
69 Q H -2.2817 Soluble
70 K H -2.7058 Soluble
71 F H 0.0000 Buried
72 Q H -2.3408 Soluble
74 G H -1.7781 Soluble
75 R H -1.6400 Soluble
76 V H 0.0000 Buried
77 T H -0.7779 Soluble
78 M H 0.0000 Buried
79 T H -0.6106 Soluble
80 R H -0.6704 Soluble
81 D H -0.6328 Soluble
82 T H -0.0211 Soluble
83 S H 0.2073 Aggregation-prone
84 I H 0.9262 Aggregation-prone
85 S H -0.0369 Soluble
86 T H 0.0000 Buried
87 A H 0.0000 Buried
88 Y H -0.8226 Soluble
89 M H 0.0000 Buried
90 E H -1.5042 Soluble
91 L H 0.0000 Buried
92 S H -1.8392 Soluble
93 R H -2.7196 Soluble
94 L H 0.0000 Buried
95 R H -3.3332 Soluble
96 S H -2.3322 Soluble
97 D H -2.5486 Soluble
98 D H 0.0000 Buried
99 T H -0.6880 Soluble
100 A H 0.0000 Buried
101 V H 0.3753 Aggregation-prone
102 Y H 0.0000 Buried
103 Y H 0.0000 Buried
104 C H 0.0000 Buried
105 A H 0.0000 Buried
106 R H -0.0512 Soluble
107 G H -0.0015 Soluble
108 G H 0.0000 Buried
114 W H 0.3910 Aggregation-prone
115 F H 0.0000 Buried
116 D H -0.2662 Soluble
117 Y H 0.0898 Aggregation-prone
118 W H -0.2226 Soluble
119 G H 0.0000 Buried
120 Q H -1.3397 Soluble
121 G H -0.5840 Soluble
122 T H 0.0000 Buried
123 L H 0.6687 Aggregation-prone
124 V H 0.0000 Buried
125 T H -0.1859 Soluble
126 V H 0.0000 Buried
127 S H -1.1004 Soluble
128 S H -0.7457 Soluble
129 A H -0.5030 Soluble
130 S H -0.4277 Soluble
131 T H -0.7153 Soluble
132 K H -1.0535 Soluble
133 G H -1.3433 Soluble
134 P H 0.0000 Buried
135 S H -0.3142 Soluble
136 V H 0.0000 Buried
137 F H 0.0000 Buried
138 P H -0.9915 Soluble
139 L H 0.0000 Buried
140 A H -1.3311 Soluble
141 P H -0.8871 Soluble
142 T H -0.2809 Soluble
143 A H -0.1911 Soluble
144 A H -0.0750 Soluble
145 L H 0.0000 Buried
146 G H 0.0000 Buried
147 C H 0.0000 Buried
148 L H 0.0000 Buried
149 V H 0.0000 Buried
150 K H -0.3322 Soluble
151 D H -0.3923 Soluble
152 Y H 0.0000 Buried
153 F H -0.2158 Soluble
154 P H -0.5723 Soluble
155 E H -0.8536 Soluble
156 P H -0.9966 Soluble
157 V H 0.0000 Buried
158 T H -0.6556 Soluble
159 V H -0.3980 Soluble
160 S H -0.3434 Soluble
161 W H 0.0000 Buried
162 N H -0.6822 Soluble
163 S H -0.6440 Soluble
164 G H -0.5640 Soluble
165 A H -0.2281 Soluble
166 L H 0.0384 Aggregation-prone
167 T H -0.1705 Soluble
168 S H -0.2170 Soluble
169 G H -0.2819 Soluble
170 V H 0.1654 Aggregation-prone
171 H H -0.1572 Soluble
172 T H -0.0619 Soluble
173 F H 0.0000 Buried
174 P H -0.2261 Soluble
175 A H 0.2105 Aggregation-prone
176 V H 0.0000 Buried
177 L H 1.2580 Aggregation-prone
178 Q H 0.3651 Aggregation-prone
179 S H -0.6485 Soluble
180 S H -0.3473 Soluble
181 G H 0.1364 Aggregation-prone
182 L H 0.1885 Aggregation-prone
183 Y H 0.3868 Aggregation-prone
184 S H 0.0000 Buried
185 L H 0.0000 Buried
186 S H 0.0000 Buried
187 S H 0.0000 Buried
188 V H 0.0000 Buried
189 V H 0.0000 Buried
190 T H -0.2306 Soluble
191 V H 0.0000 Buried
192 P H -0.4521 Soluble
193 S H -0.4676 Soluble
194 S H -0.5409 Soluble
195 S H -0.5734 Soluble
196 L H -0.9277 Soluble
197 G H -0.9415 Soluble
198 T H -0.6330 Soluble
199 Q H -1.0318 Soluble
200 T H -1.0069 Soluble
201 Y H 0.0000 Buried
202 I H -1.1156 Soluble
203 C H 0.0000 Buried
204 N H -1.4497 Soluble
205 V H 0.0000 Buried
206 N H -1.8583 Soluble
207 H H 0.0000 Buried
208 K H -2.8066 Soluble
209 P H -1.6892 Soluble
210 S H -1.7836 Soluble
211 N H -2.5648 Soluble
212 T H -2.0502 Soluble
213 K H -2.6787 Soluble
214 V H -1.6563 Soluble
215 D H -2.5165 Soluble
216 K H -2.1508 Soluble
217 K H -2.4034 Soluble
218 V H 0.0000 Buried
219 E H -2.8087 Soluble
220 P H -2.3151 Soluble
221 K H -2.4968 Soluble
222 S H -1.7766 Soluble
223 E H -1.4139 Soluble
224 F H 0.5905 Aggregation-prone
2 S L -0.0682 Soluble
3 A L -0.0859 Soluble
4 L L 0.0000 Buried
5 T L -0.2968 Soluble
6 Q L -0.4096 Soluble
7 P L -0.3257 Soluble
8 A L -0.5049 Soluble
9 S L -0.5932 Soluble
11 V L -0.2888 Soluble
12 S L -0.5642 Soluble
13 G L 0.0000 Buried
14 S L -0.8661 Soluble
15 P L -1.2173 Soluble
16 G L -1.4824 Soluble
17 Q L -1.7751 Soluble
18 S L -1.0206 Soluble
19 I L -0.2811 Soluble
20 T L -0.0430 Soluble
21 I L 0.0000 Buried
22 S L -0.2574 Soluble
23 C L 0.0000 Buried
24 T L -0.4963 Soluble
25 G L -0.5434 Soluble
26 T L -0.6659 Soluble
27 S L -0.7316 Soluble
28 S L -0.5563 Soluble
29 D L -0.4960 Soluble
30 V L 0.0000 Buried
31 G L -1.0563 Soluble
35 S L -0.5334 Soluble
36 Y L -0.0682 Soluble
37 N L -0.9005 Soluble
38 Y L 0.1822 Aggregation-prone
39 V L 0.0000 Buried
40 N L 0.0000 Buried
41 W L 0.0000 Buried
42 Y L 0.0000 Buried
43 Q L 0.0000 Buried
44 Q L 0.0000 Buried
45 H L -1.6116 Soluble
46 P L -1.2893 Soluble
47 G L -1.5900 Soluble
48 K L -2.4793 Soluble
49 A L -1.5267 Soluble
50 P L 0.0000 Buried
51 K L -1.5279 Soluble
52 L L 0.0000 Buried
53 M L 0.0000 Buried
54 I L 0.0000 Buried
55 Y L -0.7799 Soluble
56 G L -0.7584 Soluble
57 V L 0.0000 Buried
65 S L -1.5726 Soluble
66 K L -2.3424 Soluble
67 R L -2.2524 Soluble
68 P L -1.2072 Soluble
69 S L -0.9188 Soluble
70 G L -0.9368 Soluble
71 V L 0.0000 Buried
72 S L -1.1923 Soluble
74 N L -1.8151 Soluble
75 R L -1.3171 Soluble
76 F L 0.0000 Buried
77 S L -1.1955 Soluble
78 G L -0.9044 Soluble
79 S L -0.9668 Soluble
80 K L -1.1240 Soluble
83 S L -0.8600 Soluble
84 G L -1.0633 Soluble
85 N L -1.0578 Soluble
86 T L -0.7858 Soluble
87 A L 0.0000 Buried
88 S L -0.4030 Soluble
89 L L 0.0000 Buried
90 T L -0.2560 Soluble
91 I L 0.0000 Buried
92 S L -1.1548 Soluble
93 G L -1.2331 Soluble
94 L L 0.0000 Buried
95 Q L -1.8654 Soluble
96 A L -1.5225 Soluble
97 E L -2.2700 Soluble
98 D L 0.0000 Buried
99 E L -1.6128 Soluble
100 A L 0.0000 Buried
101 D L -0.9241 Soluble
102 Y L 0.0000 Buried
103 Y L 0.0000 Buried
104 C L 0.0000 Buried
105 G L 0.0000 Buried
106 T L 0.6606 Aggregation-prone
107 F L 0.8385 Aggregation-prone
108 A L 0.0000 Buried
109 G L 0.0000 Buried
110 G L -0.2130 Soluble
113 S L 0.1203 Aggregation-prone
114 Y L 0.9719 Aggregation-prone
115 Y L 1.3448 Aggregation-prone
116 G L 0.9191 Aggregation-prone
117 V L 0.5947 Aggregation-prone
118 F L 0.0917 Aggregation-prone
119 G L 0.0000 Buried
120 G L -0.7451 Soluble
121 G L -0.7952 Soluble
122 T L 0.0000 Buried
123 K L -1.0225 Soluble
124 L L 0.0000 Buried
125 T L 0.0000 Buried
126 V L 0.0000 Buried
127 L L -0.5595 Soluble
128 G L -0.8996 Soluble
129 Q L -1.1359 Soluble
130 P L -1.0394 Soluble
131 K L -1.6470 Soluble
132 A L -1.0454 Soluble
133 A L -0.6880 Soluble
134 P L -0.3683 Soluble
135 S L -0.3320 Soluble
136 V L 0.0000 Buried
137 T L -0.1227 Soluble
138 L L -0.2279 Soluble
139 F L 0.0000 Buried
140 P L -0.0021 Soluble
141 P L 0.0000 Buried
142 S L -1.0625 Soluble
143 S L -1.4274 Soluble
144 E L -2.1135 Soluble
145 E L 0.0000 Buried
146 L L -2.0698 Soluble
147 Q L -2.3257 Soluble
148 A L -1.9549 Soluble
149 N L -2.7955 Soluble
150 K L -2.9008 Soluble
151 A L 0.0000 Buried
152 T L 0.0000 Buried
153 L L 0.0000 Buried
154 V L 0.0000 Buried
155 C L 0.0000 Buried
156 L L 0.0000 Buried
157 I L 0.0000 Buried
158 S L -0.7235 Soluble
159 D L -1.5414 Soluble
160 F L 0.0000 Buried
161 Y L 0.0000 Buried
162 P L 0.0000 Buried
163 G L 0.0000 Buried
164 A L -0.2988 Soluble
165 V L -0.0692 Soluble
166 T L -0.0895 Soluble
167 V L 0.1532 Aggregation-prone
168 A L -0.4784 Soluble
169 W L 0.0000 Buried
170 K L -1.1544 Soluble
171 A L 0.0000 Buried
172 D L -1.2684 Soluble
173 S L -0.8592 Soluble
174 S L -0.5603 Soluble
175 P L -0.8401 Soluble
176 V L -0.8569 Soluble
177 K L -1.6647 Soluble
178 A L -0.8283 Soluble
179 G L -0.6812 Soluble
180 V L -0.4961 Soluble
181 E L -0.3151 Soluble
182 T L 0.0886 Aggregation-prone
183 T L 0.0068 Aggregation-prone
184 T L -0.4221 Soluble
185 P L -0.5507 Soluble
186 S L -1.2043 Soluble
187 K L -2.5837 Soluble
188 Q L -2.0985 Soluble
189 S L -1.6424 Soluble
190 N L -2.3501 Soluble
191 N L -2.6608 Soluble
192 K L -2.2537 Soluble
193 Y L -1.5032 Soluble
194 A L 0.0000 Buried
195 A L 0.0000 Buried
196 S L 0.0000 Buried
197 S L 0.0000 Buried
198 Y L 0.0000 Buried
199 L L 0.0000 Buried
200 S L -0.6470 Soluble
201 L L 0.0000 Buried
202 T L -1.9440 Soluble
203 P L -2.5600 Soluble
204 E L -3.2221 Soluble
205 Q L -2.3714 Soluble
206 W L 0.0000 Buried
207 K L -3.1034 Soluble
208 S L -2.4152 Soluble
209 H L -2.3516 Soluble
210 R L -2.4522 Soluble
211 S L -1.4828 Soluble
212 Y L 0.0000 Buried
213 S L -0.8820 Soluble
214 C L 0.0000 Buried
215 Q L -0.9112 Soluble
216 V L 0.0000 Buried
217 T L -0.6286 Soluble
218 H L 0.0000 Buried
219 E L -2.1769 Soluble
220 G L -1.4399 Soluble
221 S L -0.8223 Soluble
222 T L -0.6103 Soluble
223 V L -0.4055 Soluble
224 E L -1.8508 Soluble
225 K L -1.3012 Soluble
226 T L -0.7362 Soluble
227 V L -0.2354 Soluble
228 A L -1.1427 Soluble
229 P L -1.3463 Soluble
230 T L -1.5019 Soluble
231 E L -1.6157 Soluble
232 A L -1.0370 Soluble

3D Structure — colored by A4D score

Sequence - click residue to focus in viewer  |  colored by A4D score
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Color Legend (B-factor = A4D Score)
Score > 1.5 — highly aggregation-prone
Score 0.5–1.5 — aggregation-prone
Score ≈ 0 — buried
Score −1 to −0.5 — soluble
Score < −2.5 — highly soluble
pH Structure
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A4D Score Threshold
Highlight residues > threshold in the sequence panel
CDR Regions
HCDR1
HCDR2
HCDR3
LCDR1
LCDR2
LCDR3
Display Options

pH-Dependent Aggregation Profiles

A4D scores calculated across 11 pH conditions (4.0–9.0, step 0.5). Click a row to view the structure at that pH. The input structure is globular — max score is recommended for pH analysis.

pH Avg A4D Score Max A4D Score Downloads
4.0 -0.6586 2.9734 CSV PDB
4.5 -0.6893 2.8106 CSV PDB
5.0 -0.7251 2.5845 CSV PDB
5.5 -0.7572 2.3411 CSV PDB
6.0 -0.7753 2.1267 CSV PDB
6.5 -0.7708 1.9801 CSV PDB
7.0 -0.7429 1.9215 CSV PDB
7.5 -0.6992 1.932 CSV PDB
8.0 -0.6474 1.9768 CSV PDB
8.5 -0.5905 2.0343 CSV PDB
9.0 -0.5301 2.0947 CSV PDB
Average A4D Score vs pH
Max A4D Score vs pH