Cetuximab / 5esq

A4DAB063_5esq_B_A | Source PDB: 5esq | Chains: B, A | Done
100
Yes
10 Å
Yes
Avg A4D Score
-0.7025
Max Score
1.9432
Min Score
-3.7053
Total Score
-299.95
Score CDR
-0.3079
Score non-CDR
-0.7501

Calculation Parameters

Chain Sequence(s) QVQLKQSGPGLVQPSQSLSITCTVSGFSLTNYGVHWVRQSPGKGLEWLGVIWSGGNTDYNTPFTSRLSINKDNSKSQVFFKMNSLQSNDTAIYYCARALTYYDYEFAYWGQGTLVTVSAASTKGPSVFPLAPSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKDILLTQSPVILSVSPGERVSFSCRASQSIGTNIHWYQQRTNGSPRLLIKYASESISGIPSRFSGSGSGTDFTLSINSVESEDIADYYCQQNNNWPTTFGAGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGA input.pdb
Selected Chain(s) B (Heavy), A (Light)
Distance of Aggregation 10 Å
FoldX Energy Minimization Yes
pH Calculations Yes
Downloads Download all data (.tar.gz)

Aggrescan4D Profile

Aggregation-prone (score > 0)
Soluble (score < 0)
Buried (score = 0)

Per-Residue A4D Scores

Download CSV
Minimum Score -3.7053
Maximum Score 1.9432
Average Score -0.7025
Total Score -299.9513

Residues with A4D score > 0.0 are highlighted as aggregation-prone.

Index Residue Chain A4D Score Classification
1 Q B -1.4679 Soluble
2 V B -0.8889 Soluble
3 Q B -1.5683 Soluble
4 L B 0.0000 Buried
5 K B -2.0618 Soluble
6 Q B 0.0000 Buried
7 S B -0.7634 Soluble
8 G B -0.8995 Soluble
9 P B -0.4426 Soluble
11 G B -0.3533 Soluble
12 L B -0.1109 Soluble
13 V B 0.0000 Buried
14 Q B -1.8531 Soluble
15 P B -1.6068 Soluble
16 S B -1.6569 Soluble
17 Q B -2.0225 Soluble
18 S B -1.5124 Soluble
19 L B 0.0000 Buried
20 S B -0.4849 Soluble
21 I B 0.0000 Buried
22 T B -0.4188 Soluble
23 C B 0.0000 Buried
24 T B -1.0671 Soluble
25 V B 0.0000 Buried
26 S B -1.1798 Soluble
27 G B -0.9921 Soluble
28 F B -0.5251 Soluble
29 S B -0.9079 Soluble
30 L B 0.0000 Buried
35 T B -0.9856 Soluble
36 N B -0.8788 Soluble
37 Y B 0.4738 Aggregation-prone
38 G B 0.0000 Buried
39 V B 0.0000 Buried
40 H B 0.0000 Buried
41 W B 0.0000 Buried
42 V B 0.0000 Buried
43 R B 0.0000 Buried
44 Q B -0.5208 Soluble
45 S B -1.0709 Soluble
46 P B -1.1773 Soluble
47 G B -1.7254 Soluble
48 K B -2.2883 Soluble
49 G B -1.1910 Soluble
50 L B 0.0000 Buried
51 E B -0.5953 Soluble
52 W B 0.0000 Buried
53 L B 0.0000 Buried
54 G B 0.0000 Buried
55 V B 0.0000 Buried
56 I B 0.0000 Buried
57 W B -0.5145 Soluble
58 S B -0.6897 Soluble
59 G B -1.1316 Soluble
63 G B -1.5405 Soluble
64 N B -1.8416 Soluble
65 T B -1.2991 Soluble
66 D B -1.0216 Soluble
67 Y B -0.3523 Soluble
68 N B 0.0000 Buried
69 T B -0.1819 Soluble
70 P B -0.3534 Soluble
71 F B 0.0000 Buried
72 T B -0.4255 Soluble
74 S B -0.5026 Soluble
75 R B -0.8104 Soluble
76 L B 0.0000 Buried
77 S B -0.8241 Soluble
78 I B 0.0000 Buried
79 N B -1.6766 Soluble
80 K B -1.5622 Soluble
81 D B -2.0144 Soluble
82 N B -2.5767 Soluble
83 S B -1.8989 Soluble
84 K B -2.4993 Soluble
85 S B -1.7487 Soluble
86 Q B -1.5780 Soluble
87 V B 0.0000 Buried
88 F B -0.1544 Soluble
89 F B 0.0000 Buried
90 K B -1.0874 Soluble
91 M B 0.0000 Buried
92 N B -1.4089 Soluble
93 S B -1.4373 Soluble
94 L B 0.0000 Buried
95 Q B -2.2600 Soluble
96 S B -1.6213 Soluble
97 N B -2.0964 Soluble
98 D B 0.0000 Buried
99 T B -0.6602 Soluble
100 A B 0.0000 Buried
101 I B 0.4507 Aggregation-prone
102 Y B 0.0000 Buried
103 Y B 0.0000 Buried
104 C B 0.0000 Buried
105 A B 0.0000 Buried
106 R B 0.0000 Buried
107 A B 0.0000 Buried
108 L B 1.0508 Aggregation-prone
109 T B 1.1494 Aggregation-prone
110 Y B 1.8570 Aggregation-prone
111 Y B 1.9432 Aggregation-prone
112 D B 0.0000 Buried
113 Y B 0.0000 Buried
114 E B 0.0000 Buried
115 F B 0.0000 Buried
116 A B 0.1424 Aggregation-prone
117 Y B 0.1020 Aggregation-prone
118 W B -0.5245 Soluble
119 G B 0.0000 Buried
120 Q B -1.7290 Soluble
121 G B -0.8614 Soluble
122 T B 0.0000 Buried
123 L B 0.3332 Aggregation-prone
124 V B 0.0000 Buried
125 T B 0.0000 Buried
126 V B 0.0000 Buried
127 S B -0.6720 Soluble
128 A B -0.4573 Soluble
129 A B -0.3449 Soluble
130 S B -0.5351 Soluble
131 T B -0.6957 Soluble
132 K B -1.1792 Soluble
133 G B -1.3641 Soluble
134 P B 0.0000 Buried
135 S B -0.4197 Soluble
136 V B 0.0000 Buried
137 F B 0.0000 Buried
138 P B -1.4200 Soluble
139 L B 0.0000 Buried
140 A B -1.2614 Soluble
141 P B 0.0000 Buried
142 S B -0.7311 Soluble
143 G B -0.7724 Soluble
144 G B -0.8613 Soluble
145 T B -0.6050 Soluble
146 A B 0.0000 Buried
147 A B 0.0000 Buried
148 L B 0.0000 Buried
149 G B 0.0000 Buried
150 C B 0.0000 Buried
151 L B 0.0000 Buried
152 V B 0.0000 Buried
153 K B 0.0000 Buried
154 D B -0.3652 Soluble
155 Y B 0.0000 Buried
156 F B 0.0000 Buried
157 P B 0.0000 Buried
158 E B -0.2055 Soluble
159 P B -0.4736 Soluble
160 V B -0.5671 Soluble
161 T B -0.5569 Soluble
162 V B -0.1737 Soluble
163 S B -0.4375 Soluble
164 W B 0.0000 Buried
165 N B -0.9253 Soluble
166 S B -0.7433 Soluble
167 G B -0.6043 Soluble
168 A B -0.2787 Soluble
169 L B -0.0605 Soluble
170 T B -0.1831 Soluble
171 S B -0.1822 Soluble
172 G B -0.2182 Soluble
173 V B 0.1663 Aggregation-prone
174 H B -0.3107 Soluble
175 T B -0.0012 Soluble
176 F B 0.0000 Buried
177 P B -0.3450 Soluble
178 A B 0.2899 Aggregation-prone
179 V B 0.5350 Aggregation-prone
180 L B 1.3705 Aggregation-prone
181 Q B 0.2888 Aggregation-prone
182 S B -0.0343 Soluble
183 S B -0.1866 Soluble
184 G B 0.0946 Aggregation-prone
185 L B 0.2219 Aggregation-prone
186 Y B 0.5500 Aggregation-prone
187 S B 0.0000 Buried
188 L B 0.0000 Buried
189 S B 0.0000 Buried
190 S B 0.0000 Buried
191 V B 0.0000 Buried
192 V B 0.0000 Buried
193 T B -0.1328 Soluble
194 V B 0.0000 Buried
195 P B -0.6274 Soluble
196 S B -0.6840 Soluble
197 S B -0.6163 Soluble
198 S B 0.0000 Buried
199 L B -0.8183 Soluble
200 G B -0.9711 Soluble
201 T B -0.7670 Soluble
202 Q B -1.1342 Soluble
203 T B -1.2196 Soluble
204 Y B 0.0000 Buried
205 I B -1.5160 Soluble
206 C B 0.0000 Buried
207 N B -1.5381 Soluble
208 V B 0.0000 Buried
209 N B -1.9745 Soluble
210 H B 0.0000 Buried
211 K B -2.7539 Soluble
212 P B -1.5396 Soluble
213 S B -1.8230 Soluble
214 N B -2.5723 Soluble
215 T B -2.0536 Soluble
216 K B -2.7360 Soluble
217 V B -1.7450 Soluble
218 D B -2.6227 Soluble
219 K B -2.3412 Soluble
220 R B -2.7924 Soluble
221 V B 0.0000 Buried
222 E B -2.8289 Soluble
223 P B -1.8853 Soluble
224 K B -2.4832 Soluble
1 D A -1.2768 Soluble
2 I A 0.0000 Buried
3 L A 0.6636 Aggregation-prone
4 L A 0.0000 Buried
5 T A -0.2951 Soluble
6 Q A 0.0000 Buried
7 S A 0.2304 Aggregation-prone
8 P A 0.9003 Aggregation-prone
9 V A 1.9184 Aggregation-prone
10 I A 1.3619 Aggregation-prone
11 L A 0.5490 Aggregation-prone
12 S A -0.3383 Soluble
13 V A -1.1758 Soluble
14 S A -1.8652 Soluble
15 P A -2.0703 Soluble
16 G A -2.3509 Soluble
17 E A -3.1679 Soluble
18 R A -3.3267 Soluble
19 V A 0.0000 Buried
20 S A -0.7254 Soluble
21 F A 0.0000 Buried
22 S A -0.6900 Soluble
23 C A 0.0000 Buried
24 R A -2.2083 Soluble
25 A A -1.1598 Soluble
26 S A -0.9057 Soluble
27 Q A -1.2883 Soluble
28 S A -1.4342 Soluble
29 I A 0.0000 Buried
36 G A -1.0091 Soluble
37 T A -0.8132 Soluble
38 N A -0.8029 Soluble
39 I A 0.0000 Buried
40 H A 0.0000 Buried
41 W A 0.0000 Buried
42 Y A 0.0000 Buried
43 Q A 0.0000 Buried
44 Q A -1.8643 Soluble
45 R A -2.8290 Soluble
46 T A -2.1907 Soluble
47 N A -2.0544 Soluble
48 G A -1.8833 Soluble
49 S A -1.2381 Soluble
50 P A 0.0000 Buried
51 R A -1.1553 Soluble
52 L A 0.0000 Buried
53 L A 0.0000 Buried
54 I A 0.0000 Buried
55 K A -0.7486 Soluble
56 Y A -0.6477 Soluble
57 A A 0.0000 Buried
65 S A -1.2912 Soluble
66 E A -2.0004 Soluble
67 S A -1.1992 Soluble
68 I A -0.5403 Soluble
69 S A -0.3464 Soluble
70 G A -0.4823 Soluble
71 I A -0.3247 Soluble
72 P A -0.3598 Soluble
74 S A -0.6599 Soluble
75 R A -1.3061 Soluble
76 F A 0.0000 Buried
77 S A -0.9891 Soluble
78 G A -0.7310 Soluble
79 S A -0.9196 Soluble
80 G A -1.1750 Soluble
83 S A -1.1989 Soluble
84 G A -1.3578 Soluble
85 T A -1.9360 Soluble
86 D A -2.7162 Soluble
87 F A 0.0000 Buried
88 T A -0.8695 Soluble
89 L A 0.0000 Buried
90 S A -0.9631 Soluble
91 I A 0.0000 Buried
92 N A -2.9089 Soluble
93 S A -2.6504 Soluble
94 V A 0.0000 Buried
95 E A -2.4422 Soluble
96 S A -2.0058 Soluble
98 D A -1.3000 Soluble
99 I A -1.5557 Soluble
100 A A 0.0000 Buried
101 D A -1.1755 Soluble
102 Y A 0.0000 Buried
103 Y A 0.0000 Buried
104 C A 0.0000 Buried
105 Q A 0.0000 Buried
106 Q A 0.0000 Buried
107 N A -0.6428 Soluble
108 N A -1.0743 Soluble
109 N A -0.8205 Soluble
114 W A 0.2765 Aggregation-prone
115 P A 0.0000 Buried
116 T A 0.0000 Buried
117 T A -0.0301 Soluble
118 F A 0.1472 Aggregation-prone
119 G A 0.0000 Buried
120 A A 0.0322 Aggregation-prone
121 G A 0.0715 Aggregation-prone
122 T A 0.0000 Buried
123 K A -0.3231 Soluble
124 L A 0.0000 Buried
125 E A -1.0279 Soluble
126 L A 0.0000 Buried
127 K A -1.5757 Soluble
128 R A -1.1645 Soluble
129 T A -0.0856 Soluble
130 V A 0.4440 Aggregation-prone
131 A A -0.0099 Soluble
132 A A -0.0990 Soluble
133 P A 0.0000 Buried
134 S A -0.1938 Soluble
135 V A 0.0000 Buried
136 F A 0.0322 Aggregation-prone
137 I A 0.0208 Aggregation-prone
138 F A 0.0000 Buried
139 P A -0.5396 Soluble
140 P A 0.0000 Buried
141 S A -1.9014 Soluble
142 D A -3.1481 Soluble
143 E A -3.0322 Soluble
144 Q A 0.0000 Buried
145 L A -2.3036 Soluble
146 K A -2.7672 Soluble
147 S A -1.7235 Soluble
148 G A -1.3827 Soluble
149 T A -0.8373 Soluble
150 A A 0.0000 Buried
151 S A 0.0000 Buried
152 V A 0.0000 Buried
153 V A 0.0000 Buried
154 C A 0.0000 Buried
155 L A 0.0000 Buried
156 L A 0.0000 Buried
157 N A 0.0000 Buried
158 N A -0.9430 Soluble
159 F A 0.0000 Buried
160 Y A 0.0000 Buried
161 P A -1.7524 Soluble
162 R A -2.9312 Soluble
163 E A -3.2588 Soluble
164 A A -2.3592 Soluble
165 K A -2.2654 Soluble
166 V A -1.1520 Soluble
167 Q A -0.6971 Soluble
168 W A 0.0000 Buried
169 K A -0.6062 Soluble
170 V A 0.0000 Buried
171 D A -1.8594 Soluble
172 N A -1.4985 Soluble
173 A A -0.2479 Soluble
174 L A 0.7654 Aggregation-prone
175 Q A -0.1501 Soluble
176 S A -0.4698 Soluble
177 G A -0.9670 Soluble
178 N A -0.9106 Soluble
179 S A -1.3539 Soluble
180 Q A -1.9091 Soluble
181 E A -2.2046 Soluble
182 S A -1.1545 Soluble
183 V A -0.8421 Soluble
184 T A -1.1472 Soluble
185 E A -2.3738 Soluble
186 Q A 0.0000 Buried
187 D A -1.8460 Soluble
188 S A -2.1508 Soluble
189 K A -2.5116 Soluble
190 D A -1.9004 Soluble
191 S A 0.0000 Buried
192 T A 0.0000 Buried
193 Y A -1.3737 Soluble
194 S A 0.0000 Buried
195 L A 0.0000 Buried
196 S A 0.0000 Buried
197 S A 0.0000 Buried
198 T A -0.7930 Soluble
199 L A 0.0000 Buried
200 T A -0.4843 Soluble
201 L A -0.6455 Soluble
202 S A -1.0249 Soluble
203 K A -2.0035 Soluble
204 A A -1.8959 Soluble
205 D A -2.5443 Soluble
206 Y A 0.0000 Buried
207 E A -3.7053 Soluble
208 K A -3.7041 Soluble
209 H A -3.0505 Soluble
210 K A -3.0719 Soluble
211 V A -1.2907 Soluble
212 Y A 0.0000 Buried
213 A A -0.8356 Soluble
214 C A 0.0000 Buried
215 E A -0.9886 Soluble
216 V A 0.0000 Buried
217 T A -1.2630 Soluble
218 H A 0.0000 Buried
219 Q A -1.7294 Soluble
220 G A -0.3867 Soluble
221 L A -0.2083 Soluble
222 S A -0.4485 Soluble
223 S A -0.3938 Soluble
224 P A -0.5602 Soluble
225 V A 0.0241 Aggregation-prone
226 T A -0.5030 Soluble
227 K A -0.8292 Soluble
228 S A -0.6427 Soluble
229 F A -0.6656 Soluble
230 N A -1.4580 Soluble
231 R A -2.2694 Soluble
232 G A -1.4062 Soluble
233 A A -0.7165 Soluble

3D Structure — colored by A4D score

Sequence - click residue to focus in viewer  |  colored by A4D score
Load structure to view sequence…
Color Legend (B-factor = A4D Score)
Score > 1.5 — highly aggregation-prone
Score 0.5–1.5 — aggregation-prone
Score ≈ 0 — buried
Score −1 to −0.5 — soluble
Score < −2.5 — highly soluble
pH Structure
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A4D Score Threshold
Highlight residues > threshold in the sequence panel
CDR Regions
HCDR1
HCDR2
HCDR3
LCDR1
LCDR2
LCDR3
Display Options

pH-Dependent Aggregation Profiles

A4D scores calculated across 11 pH conditions (4.0–9.0, step 0.5). Click a row to view the structure at that pH. The input structure is globular — max score is recommended for pH analysis.

pH Avg A4D Score Max A4D Score Downloads
4.0 -0.715 2.8899 CSV PDB
4.5 -0.7527 2.8227 CSV PDB
5.0 -0.7975 2.7423 CSV PDB
5.5 -0.8404 2.6566 CSV PDB
6.0 -0.871 2.5689 CSV PDB
6.5 -0.8814 2.4808 CSV PDB
7.0 -0.8716 2.3927 CSV PDB
7.5 -0.8479 2.3055 CSV PDB
8.0 -0.8162 2.2764 CSV PDB
8.5 -0.7789 2.3243 CSV PDB
9.0 -0.7362 2.3758 CSV PDB
Average A4D Score vs pH
Max A4D Score vs pH