Vilastobart / 8g8n

A4DAB294_8g8n_A_B | Source PDB: 8g8n | Chains: A, B | Done
100
Yes
10 Å
Yes
Avg A4D Score
-0.7707
Max Score
1.4064
Min Score
-3.6788
Total Score
-326.79
Score CDR
-0.6378
Score non-CDR
-0.7865

Calculation Parameters

Chain Sequence(s) QVQLVQSGAEVKKPGSSVKVSCKASGYTFTNYFMNWVRQAPGQGLEWMGRVDPEQGRADYAEKFKKRVTITADKSTSTAYMELSSLRSEDTAVYYCARRAMDNYGFAYWGQGTLVTVSSASTKGPSVFPLAPSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPEIVLTQSPDFQSVTPKEKVTITCSANSALSYMYWYQQKPDQSPKLWVHGTSNLASGVPSRFSGSGSGTDFTLTINSLEAEDAATYYCHHWSNTQWTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG input.pdb
Selected Chain(s) A (Heavy), B (Light)
Distance of Aggregation 10 Å
FoldX Energy Minimization Yes
pH Calculations Yes
Downloads Download all data (.tar.gz)

Aggrescan4D Profile

Aggregation-prone (score > 0)
Soluble (score < 0)
Buried (score = 0)

Per-Residue A4D Scores

Download CSV
Minimum Score -3.6788
Maximum Score 1.4064
Average Score -0.7707
Total Score -326.7868

Residues with A4D score > 0.0 are highlighted as aggregation-prone.

Index Residue Chain A4D Score Classification
1 Q A -1.6077 Soluble
2 V A 0.0000 Buried
3 Q A -1.4258 Soluble
4 L A 0.0000 Buried
5 V A -0.0898 Soluble
6 Q A 0.0000 Buried
7 S A -0.7378 Soluble
8 G A -0.7270 Soluble
9 A A -0.7415 Soluble
11 E A -1.1374 Soluble
12 V A -0.6277 Soluble
13 K A -1.6751 Soluble
14 K A -2.4643 Soluble
15 P A -2.3305 Soluble
16 G A -1.6401 Soluble
17 S A -1.3147 Soluble
18 S A -1.5071 Soluble
19 V A 0.0000 Buried
20 K A -2.1714 Soluble
21 V A 0.0000 Buried
22 S A -0.6801 Soluble
23 C A 0.0000 Buried
24 K A -1.1778 Soluble
25 A A 0.0000 Buried
26 S A -1.0063 Soluble
27 G A -1.1495 Soluble
28 Y A -0.6663 Soluble
29 T A -0.6340 Soluble
30 F A 0.0000 Buried
35 T A -1.9306 Soluble
36 N A -1.5336 Soluble
37 Y A -0.5295 Soluble
38 F A -0.4288 Soluble
39 M A 0.0000 Buried
40 N A 0.0000 Buried
41 W A 0.0000 Buried
42 V A 0.0000 Buried
43 R A 0.0000 Buried
44 Q A -0.6273 Soluble
45 A A -0.9837 Soluble
46 P A -0.9983 Soluble
47 G A -1.2561 Soluble
48 Q A -1.7377 Soluble
49 G A -1.1604 Soluble
50 L A 0.0000 Buried
51 E A -0.8974 Soluble
52 W A 0.0000 Buried
53 M A 0.0000 Buried
54 G A 0.0000 Buried
55 R A -0.5442 Soluble
56 V A 0.0000 Buried
57 D A -2.0017 Soluble
58 P A 0.0000 Buried
59 E A -3.4923 Soluble
62 Q A -3.0989 Soluble
63 G A -2.7806 Soluble
64 R A -2.8780 Soluble
65 A A -1.3895 Soluble
66 D A -1.3597 Soluble
67 Y A -1.5202 Soluble
68 A A 0.0000 Buried
69 E A -3.4788 Soluble
70 K A -3.3800 Soluble
71 F A 0.0000 Buried
72 K A -3.5190 Soluble
74 K A -3.2488 Soluble
75 R A -2.0620 Soluble
76 V A 0.0000 Buried
77 T A -1.1255 Soluble
78 I A 0.0000 Buried
79 T A -0.8289 Soluble
80 A A -1.6535 Soluble
81 D A -1.9616 Soluble
82 K A -2.7012 Soluble
83 S A -1.2929 Soluble
84 T A -1.1503 Soluble
85 S A -1.3414 Soluble
86 T A -1.0762 Soluble
87 A A 0.0000 Buried
88 Y A -0.6845 Soluble
89 M A 0.0000 Buried
90 E A -1.5908 Soluble
91 L A 0.0000 Buried
92 S A -1.4013 Soluble
93 S A -1.4016 Soluble
94 L A 0.0000 Buried
95 R A -3.1586 Soluble
96 S A -2.4134 Soluble
97 E A -2.5402 Soluble
98 D A 0.0000 Buried
99 T A -0.9602 Soluble
100 A A 0.0000 Buried
101 V A 0.1886 Aggregation-prone
102 Y A 0.0000 Buried
103 Y A 0.0000 Buried
104 C A 0.0000 Buried
105 A A 0.0000 Buried
106 R A 0.0000 Buried
107 R A 0.1124 Aggregation-prone
108 A A 0.0000 Buried
109 M A 0.2277 Aggregation-prone
110 D A -1.2144 Soluble
112 N A -0.3614 Soluble
113 Y A 0.8656 Aggregation-prone
114 G A 0.0000 Buried
115 F A 0.0000 Buried
116 A A -0.0505 Soluble
117 Y A -0.1093 Soluble
118 W A -0.3661 Soluble
119 G A 0.0000 Buried
120 Q A -1.4339 Soluble
121 G A -0.7671 Soluble
122 T A 0.0000 Buried
123 L A -0.1787 Soluble
124 V A 0.0000 Buried
125 T A 0.0000 Buried
126 V A 0.0000 Buried
127 S A -1.4971 Soluble
128 S A -1.1396 Soluble
129 A A -0.6383 Soluble
130 S A -0.7150 Soluble
131 T A -0.7173 Soluble
132 K A -1.2199 Soluble
133 G A -1.4048 Soluble
134 P A -0.6348 Soluble
135 S A -0.2505 Soluble
136 V A 0.0000 Buried
137 F A -0.5765 Soluble
138 P A -1.0190 Soluble
139 L A 0.0000 Buried
140 A A -0.8050 Soluble
141 P A 0.0000 Buried
142 S A -0.3709 Soluble
143 G A -0.6386 Soluble
144 T A -0.5166 Soluble
145 A A 0.0000 Buried
146 A A 0.0000 Buried
147 L A 0.0000 Buried
148 G A 0.0000 Buried
149 C A 0.0000 Buried
150 L A 0.0000 Buried
151 V A 0.0000 Buried
152 K A 0.0000 Buried
153 D A -0.4071 Soluble
154 Y A 0.0000 Buried
155 F A 0.0000 Buried
156 P A 0.0000 Buried
157 E A -0.2921 Soluble
158 P A -0.7020 Soluble
159 V A -0.7476 Soluble
160 T A -0.6765 Soluble
161 V A -0.4624 Soluble
162 S A -0.4919 Soluble
163 W A 0.0000 Buried
164 N A -0.8026 Soluble
165 S A -0.7029 Soluble
166 G A -0.5854 Soluble
167 A A -0.2566 Soluble
168 L A -0.0370 Soluble
169 T A -0.2013 Soluble
170 S A -0.2055 Soluble
171 G A -0.2521 Soluble
172 V A 0.1247 Aggregation-prone
173 H A -0.3056 Soluble
174 T A -0.1282 Soluble
175 F A 0.0000 Buried
176 P A -0.2509 Soluble
177 A A 0.3389 Aggregation-prone
178 V A 0.6071 Aggregation-prone
179 L A 1.4064 Aggregation-prone
180 Q A 0.3851 Aggregation-prone
181 S A -0.0102 Soluble
182 S A -0.1662 Soluble
183 G A 0.0836 Aggregation-prone
184 L A 0.1855 Aggregation-prone
185 Y A 0.4807 Aggregation-prone
186 S A 0.3276 Aggregation-prone
187 L A 0.0000 Buried
188 S A 0.0000 Buried
189 S A 0.0000 Buried
190 V A 0.0000 Buried
191 V A 0.0000 Buried
192 T A -0.1510 Soluble
193 V A 0.0000 Buried
194 P A -0.6078 Soluble
195 S A -0.5160 Soluble
196 S A -0.5963 Soluble
197 S A -0.6519 Soluble
198 L A -0.8439 Soluble
199 G A -1.1488 Soluble
200 T A -0.8302 Soluble
201 Q A -1.5597 Soluble
202 T A -1.3125 Soluble
203 Y A 0.0000 Buried
204 I A -1.2468 Soluble
205 C A 0.0000 Buried
206 N A -1.6328 Soluble
207 V A 0.0000 Buried
208 N A -2.2829 Soluble
209 H A 0.0000 Buried
210 K A -2.8294 Soluble
211 P A -1.7774 Soluble
212 S A -1.9103 Soluble
213 N A -2.6365 Soluble
214 T A -2.1795 Soluble
215 K A -2.8037 Soluble
216 V A -1.5525 Soluble
217 D A -2.6031 Soluble
218 K A -1.9874 Soluble
219 K A -2.5759 Soluble
220 V A 0.0000 Buried
221 E A -2.5423 Soluble
222 P A -1.2047 Soluble
1 E B -1.5615 Soluble
2 I B -0.2542 Soluble
3 V B 0.9784 Aggregation-prone
4 L B 0.0000 Buried
5 T B -0.3504 Soluble
6 Q B 0.0000 Buried
7 S B -0.8150 Soluble
8 P B -0.8816 Soluble
9 D B -1.5484 Soluble
10 F B 0.0685 Aggregation-prone
11 Q B -0.4419 Soluble
12 S B -0.4761 Soluble
13 V B 0.0000 Buried
14 T B -2.0193 Soluble
15 P B -2.4773 Soluble
16 K B -3.3527 Soluble
17 E B -3.6788 Soluble
18 K B -3.2242 Soluble
19 V B 0.0000 Buried
20 T B -0.6100 Soluble
21 I B 0.0000 Buried
22 T B -0.7210 Soluble
23 C B 0.0000 Buried
24 S B -0.8380 Soluble
25 A B -0.5415 Soluble
26 N B -1.3020 Soluble
27 S B -0.8690 Soluble
28 A B -0.6476 Soluble
29 L B -0.1651 Soluble
37 S B 0.1910 Aggregation-prone
38 Y B 1.2243 Aggregation-prone
39 M B 0.0000 Buried
40 Y B 0.0000 Buried
41 W B 0.0000 Buried
42 Y B 0.0000 Buried
43 Q B 0.0000 Buried
44 Q B 0.0000 Buried
45 K B -1.6010 Soluble
46 P B -1.9274 Soluble
47 D B -2.6178 Soluble
48 Q B -2.3173 Soluble
49 S B -1.3762 Soluble
50 P B 0.0000 Buried
51 K B -0.9920 Soluble
52 L B 0.0000 Buried
53 W B -0.3414 Soluble
54 V B 0.0000 Buried
55 H B -0.1720 Soluble
56 G B -0.1037 Soluble
57 T B -0.2879 Soluble
65 S B -0.7664 Soluble
66 N B -1.3412 Soluble
67 L B -0.5075 Soluble
68 A B -0.4890 Soluble
69 S B -0.4463 Soluble
70 G B -0.4596 Soluble
71 V B -0.3891 Soluble
72 P B -0.3383 Soluble
74 S B -0.5150 Soluble
75 R B -1.0901 Soluble
76 F B 0.0000 Buried
77 S B -0.5648 Soluble
78 G B 0.0000 Buried
79 S B -0.8010 Soluble
80 G B -0.8287 Soluble
83 S B -0.8229 Soluble
84 G B -1.0559 Soluble
85 T B -1.3611 Soluble
86 D B -2.0267 Soluble
87 F B 0.0000 Buried
88 T B -0.6013 Soluble
89 L B 0.0000 Buried
90 T B -0.6756 Soluble
91 I B 0.0000 Buried
92 N B -2.3782 Soluble
93 S B -2.6733 Soluble
94 L B 0.0000 Buried
95 E B -2.4372 Soluble
96 A B -2.0740 Soluble
97 E B -2.2089 Soluble
98 D B 0.0000 Buried
99 A B -1.0034 Soluble
100 A B 0.0000 Buried
101 T B -0.5820 Soluble
102 Y B 0.0000 Buried
103 Y B 0.0000 Buried
104 C B 0.0000 Buried
105 H B 0.0000 Buried
106 H B 0.0000 Buried
107 W B 0.1960 Aggregation-prone
108 S B -0.6935 Soluble
109 N B -1.5385 Soluble
114 T B -1.2045 Soluble
115 Q B -1.0135 Soluble
116 W B 0.0000 Buried
117 T B 0.0192 Aggregation-prone
118 F B 0.0000 Buried
119 G B 0.0000 Buried
120 G B -1.0450 Soluble
121 G B -0.9889 Soluble
122 T B 0.0000 Buried
123 K B -0.7266 Soluble
124 V B 0.0000 Buried
125 E B 0.0000 Buried
126 I B 0.0000 Buried
127 K B -1.4034 Soluble
128 R B -1.1007 Soluble
129 T B -0.1053 Soluble
130 V B 0.3798 Aggregation-prone
131 A B 0.1132 Aggregation-prone
132 A B -0.1075 Soluble
133 P B 0.0000 Buried
134 S B -0.0571 Soluble
135 V B 0.1318 Aggregation-prone
136 F B 0.2688 Aggregation-prone
137 I B 0.1899 Aggregation-prone
138 F B 0.0000 Buried
139 P B -0.6463 Soluble
140 P B -0.7993 Soluble
141 S B -1.5005 Soluble
142 D B -2.7794 Soluble
143 E B -2.6037 Soluble
144 Q B 0.0000 Buried
145 L B -2.1940 Soluble
146 K B -2.7508 Soluble
147 S B -1.7380 Soluble
148 G B -1.2482 Soluble
149 T B -1.0349 Soluble
150 A B 0.0000 Buried
151 S B 0.0000 Buried
152 V B 0.0000 Buried
153 V B 0.0000 Buried
154 C B 0.0000 Buried
155 L B 0.0000 Buried
156 L B 0.0000 Buried
157 N B 0.0000 Buried
158 N B -0.9259 Soluble
159 F B 0.0000 Buried
160 Y B 0.0000 Buried
161 P B -1.6859 Soluble
162 R B -2.6829 Soluble
163 E B -3.0460 Soluble
164 A B -2.2238 Soluble
165 K B -2.0892 Soluble
166 V B -1.0292 Soluble
167 Q B -0.7404 Soluble
168 W B 0.0000 Buried
169 K B -0.5273 Soluble
170 V B 0.0000 Buried
171 D B -1.9083 Soluble
172 N B -1.4814 Soluble
173 A B -0.2388 Soluble
174 L B 0.7584 Aggregation-prone
175 Q B -0.0772 Soluble
176 S B -0.3832 Soluble
177 G B -0.8960 Soluble
178 N B -0.7836 Soluble
179 S B -1.0353 Soluble
180 Q B -1.2229 Soluble
181 E B -1.5104 Soluble
182 S B 0.0000 Buried
183 V B -0.8414 Soluble
184 T B 0.0000 Buried
185 E B -2.1652 Soluble
186 Q B -1.8300 Soluble
187 D B -1.8421 Soluble
188 S B -1.9995 Soluble
189 K B -2.2925 Soluble
190 D B -1.9295 Soluble
191 S B -1.7923 Soluble
192 T B 0.0000 Buried
193 Y B 0.0000 Buried
194 S B 0.0000 Buried
195 L B 0.0000 Buried
196 S B 0.0000 Buried
197 S B 0.0000 Buried
198 T B -0.5334 Soluble
199 L B 0.0000 Buried
200 T B -0.4491 Soluble
201 L B -0.7084 Soluble
202 S B -1.1469 Soluble
203 K B -2.1032 Soluble
204 A B -1.9389 Soluble
205 D B -2.7808 Soluble
206 Y B 0.0000 Buried
207 E B -3.3174 Soluble
208 K B -3.5521 Soluble
209 H B -3.1568 Soluble
210 K B -3.2061 Soluble
211 V B -1.7337 Soluble
212 Y B 0.0000 Buried
213 A B 0.0000 Buried
214 C B 0.0000 Buried
215 E B -0.9266 Soluble
216 V B 0.0000 Buried
217 T B -1.1628 Soluble
218 H B 0.0000 Buried
219 Q B -1.7202 Soluble
220 G B -0.4104 Soluble
221 L B -0.2186 Soluble
222 S B -0.4504 Soluble
223 S B -0.4146 Soluble
224 P B -0.4796 Soluble
225 V B 0.0675 Aggregation-prone
226 T B -0.4412 Soluble
227 K B -0.6414 Soluble
228 S B -0.7245 Soluble
229 F B -1.0117 Soluble
230 N B -2.1980 Soluble
231 R B -2.4606 Soluble
232 G B -1.4867 Soluble

3D Structure — colored by A4D score

Sequence - click residue to focus in viewer  |  colored by A4D score
Load structure to view sequence…
Color Legend (B-factor = A4D Score)
Score > 1.5 — highly aggregation-prone
Score 0.5–1.5 — aggregation-prone
Score ≈ 0 — buried
Score −1 to −0.5 — soluble
Score < −2.5 — highly soluble
pH Structure
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A4D Score Threshold
Highlight residues > threshold in the sequence panel
CDR Regions
HCDR1
HCDR2
HCDR3
LCDR1
LCDR2
LCDR3
Display Options

pH-Dependent Aggregation Profiles

A4D scores calculated across 11 pH conditions (4.0–9.0, step 0.5). Click a row to view the structure at that pH. The input structure is globular — max score is recommended for pH analysis.

pH Avg A4D Score Max A4D Score Downloads
4.0 -0.7671 2.4012 CSV PDB
4.5 -0.818 2.2175 CSV PDB
5.0 -0.8773 2.02 CSV PDB
5.5 -0.9329 1.8249 CSV PDB
6.0 -0.9714 1.642 CSV PDB
6.5 -0.9819 1.6005 CSV PDB
7.0 -0.964 1.6209 CSV PDB
7.5 -0.927 1.7064 CSV PDB
8.0 -0.8793 1.7942 CSV PDB
8.5 -0.8239 1.8819 CSV PDB
9.0 -0.7614 1.9667 CSV PDB
Average A4D Score vs pH
Max A4D Score vs pH