Renvistobart / 8szy

A4DAB224_8szy_I_M | Source PDB: 8szy | Chains: I, M | Done
100
Yes
10 Å
Yes
Avg A4D Score
-0.6096
Max Score
2.2339
Min Score
-3.5393
Total Score
-266.4
Score CDR
-0.0515
Score non-CDR
-0.6967

Calculation Parameters

Chain Sequence(s) VHLQESGPGLVKPSETLSLTCTVSGGSVSSGIYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARDYYVSGNYYNVDYYFFGVDVWGQGTTVTVSSASTKGPSVFPLAPGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPEIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPPLFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE input.pdb
Selected Chain(s) I (Heavy), M (Light)
Distance of Aggregation 10 Å
FoldX Energy Minimization Yes
pH Calculations Yes
Downloads Download all data (.tar.gz)

Aggrescan4D Profile

Aggregation-prone (score > 0)
Soluble (score < 0)
Buried (score = 0)

Per-Residue A4D Scores

Download CSV
Minimum Score -3.5393
Maximum Score 2.2339
Average Score -0.6096
Total Score -266.4008

Residues with A4D score > 0.0 are highlighted as aggregation-prone.

Index Residue Chain A4D Score Classification
2 V I 0.4398 Aggregation-prone
3 H I -0.8913 Soluble
4 L I 0.0000 Buried
5 Q I -1.4540 Soluble
6 E I 0.0000 Buried
7 S I -0.7161 Soluble
8 G I -0.6830 Soluble
9 P I -0.6664 Soluble
11 G I -0.4656 Soluble
12 L I -0.3361 Soluble
13 V I 0.0000 Buried
14 K I -2.4053 Soluble
15 P I -1.6929 Soluble
16 S I -1.7092 Soluble
17 E I -2.6072 Soluble
18 T I -1.6291 Soluble
19 L I 0.0000 Buried
20 S I -0.8191 Soluble
21 L I 0.0000 Buried
22 T I -0.5340 Soluble
23 C I 0.0000 Buried
24 T I -1.1127 Soluble
25 V I 0.0000 Buried
26 S I -0.7040 Soluble
27 G I -0.4614 Soluble
28 G I -0.4029 Soluble
29 S I -0.4854 Soluble
30 V I 0.0000 Buried
31 S I 0.0688 Aggregation-prone
34 S I 0.5394 Aggregation-prone
35 G I 0.9445 Aggregation-prone
36 I I 2.2339 Aggregation-prone
37 Y I 1.4120 Aggregation-prone
38 Y I 0.0000 Buried
39 W I 0.0000 Buried
40 S I 0.0000 Buried
41 W I 0.0000 Buried
42 I I 0.0000 Buried
43 R I 0.0000 Buried
44 Q I -0.7651 Soluble
45 P I -0.8570 Soluble
46 P I -0.9769 Soluble
47 G I -1.4598 Soluble
48 K I -2.2071 Soluble
49 G I -1.3058 Soluble
50 L I 0.0000 Buried
51 E I -0.7506 Soluble
52 W I 0.0000 Buried
53 I I 0.0000 Buried
54 G I 0.0000 Buried
55 Y I 0.0000 Buried
56 I I 0.0000 Buried
57 Y I 0.5414 Aggregation-prone
58 Y I 0.5945 Aggregation-prone
59 S I -0.0761 Soluble
63 G I -0.2636 Soluble
64 S I -0.3142 Soluble
65 T I -0.2612 Soluble
66 N I -0.6500 Soluble
67 Y I -0.7796 Soluble
68 N I -0.9413 Soluble
69 P I -1.1806 Soluble
70 S I -0.9383 Soluble
71 L I 0.0000 Buried
72 K I -2.1460 Soluble
74 S I -1.3593 Soluble
75 R I -1.2931 Soluble
76 V I 0.0000 Buried
77 T I -0.7772 Soluble
78 I I 0.0000 Buried
79 S I -0.2025 Soluble
80 V I -0.3356 Soluble
81 D I -1.1586 Soluble
82 T I -1.0266 Soluble
83 S I -1.3748 Soluble
84 K I -2.1915 Soluble
85 N I -1.5394 Soluble
86 Q I -1.3034 Soluble
87 F I 0.0000 Buried
88 S I -0.3966 Soluble
89 L I 0.0000 Buried
90 K I -0.9182 Soluble
91 L I 0.0000 Buried
92 S I -1.1213 Soluble
93 S I -1.4040 Soluble
94 V I 0.0000 Buried
95 T I -0.6239 Soluble
96 A I -0.1197 Soluble
97 A I 0.0834 Aggregation-prone
98 D I 0.0000 Buried
99 T I 0.0871 Aggregation-prone
100 A I 0.0000 Buried
101 V I 0.0578 Aggregation-prone
102 Y I 0.0000 Buried
103 Y I 0.0000 Buried
104 C I 0.0000 Buried
105 A I 0.0000 Buried
106 R I 0.0000 Buried
107 D I 0.0000 Buried
108 Y I 1.2656 Aggregation-prone
109 Y I 1.4095 Aggregation-prone
110 V I 0.5951 Aggregation-prone
111 S I 0.2329 Aggregation-prone
111A G I -0.5771 Soluble
111B N I -0.7385 Soluble
111C Y I 0.3772 Aggregation-prone
111D Y I 0.5417 Aggregation-prone
112E N I -0.7041 Soluble
112D V I -0.5776 Soluble
112C D I -1.6054 Soluble
112B Y I -0.7581 Soluble
112A Y I 0.0000 Buried
112 F I 0.9137 Aggregation-prone
113 F I 0.9335 Aggregation-prone
114 G I 0.0000 Buried
115 V I 0.0000 Buried
116 D I -0.5677 Soluble
117 V I -0.2377 Soluble
118 W I -0.6344 Soluble
119 G I 0.0000 Buried
120 Q I -1.7593 Soluble
121 G I -0.9360 Soluble
122 T I -0.4848 Soluble
123 T I -0.2215 Soluble
124 V I 0.0000 Buried
125 T I 0.0000 Buried
126 V I -0.6041 Soluble
127 S I -0.6006 Soluble
128 S I -0.8014 Soluble
129 A I -0.4848 Soluble
130 S I -0.6228 Soluble
131 T I -0.8727 Soluble
132 K I -1.0897 Soluble
133 G I -1.3481 Soluble
134 P I 0.0000 Buried
135 S I -0.3155 Soluble
136 V I 0.0000 Buried
137 F I -0.5946 Soluble
138 P I -0.9783 Soluble
139 L I 0.0000 Buried
140 A I -0.7648 Soluble
141 P I -0.4502 Soluble
142 G I -0.6181 Soluble
143 T I -0.5213 Soluble
144 A I -0.2444 Soluble
145 A I 0.0000 Buried
146 L I 0.0000 Buried
147 G I 0.0000 Buried
148 C I 0.0000 Buried
149 L I 0.0000 Buried
150 V I 0.0000 Buried
151 K I 0.0000 Buried
152 D I -0.3119 Soluble
153 Y I 0.0000 Buried
154 F I -0.0974 Soluble
155 P I 0.0000 Buried
156 E I -0.4526 Soluble
157 P I -0.5938 Soluble
158 V I -0.5659 Soluble
159 T I -0.5411 Soluble
160 V I -0.3505 Soluble
161 S I -0.3974 Soluble
162 W I 0.0000 Buried
163 N I -0.7965 Soluble
164 S I -0.6858 Soluble
165 G I -0.5886 Soluble
166 A I -0.2513 Soluble
167 L I -0.0108 Soluble
168 T I -0.1727 Soluble
169 S I -0.2010 Soluble
170 G I -0.2421 Soluble
171 V I 0.1329 Aggregation-prone
172 H I -0.3243 Soluble
173 T I -0.1671 Soluble
174 F I 0.0000 Buried
175 P I -0.2955 Soluble
176 A I 0.3691 Aggregation-prone
177 V I 0.8086 Aggregation-prone
178 L I 1.5920 Aggregation-prone
179 Q I 0.4727 Aggregation-prone
180 S I -0.0068 Soluble
181 S I -0.1797 Soluble
182 G I 0.1192 Aggregation-prone
183 L I 0.3613 Aggregation-prone
184 Y I 0.6743 Aggregation-prone
185 S I 0.0000 Buried
186 L I 0.0000 Buried
187 S I 0.0000 Buried
188 S I 0.0000 Buried
189 V I 0.0000 Buried
190 V I 0.0000 Buried
191 T I -0.1861 Soluble
192 V I 0.0000 Buried
193 P I -0.4858 Soluble
194 S I -0.5355 Soluble
195 S I -0.6127 Soluble
196 S I -0.6115 Soluble
197 L I -0.8175 Soluble
198 G I -0.9804 Soluble
199 T I -0.7760 Soluble
200 Q I -1.3011 Soluble
201 T I -1.2144 Soluble
202 Y I 0.0000 Buried
203 I I -1.2679 Soluble
204 C I 0.0000 Buried
205 N I -1.4019 Soluble
206 V I 0.0000 Buried
207 N I -1.8142 Soluble
208 H I 0.0000 Buried
209 K I -2.7943 Soluble
210 P I -1.5945 Soluble
211 S I -1.8115 Soluble
212 N I -2.5790 Soluble
213 T I -2.0763 Soluble
214 K I -2.5676 Soluble
215 V I -1.4774 Soluble
216 D I -2.1760 Soluble
217 K I -1.9754 Soluble
218 R I -2.5001 Soluble
219 V I 0.0000 Buried
220 E I -2.2239 Soluble
221 P I -1.0464 Soluble
1 E M -1.4075 Soluble
2 I M 0.0000 Buried
3 V M 0.7334 Aggregation-prone
4 L M 0.0000 Buried
5 T M -0.5649 Soluble
6 Q M 0.0000 Buried
7 S M -0.6353 Soluble
8 P M -0.3176 Soluble
9 A M -0.2999 Soluble
10 T M -0.4577 Soluble
11 L M -0.3898 Soluble
12 S M -0.8468 Soluble
13 L M -1.2468 Soluble
14 S M -1.5991 Soluble
15 P M -1.8138 Soluble
16 G M -1.7469 Soluble
17 E M -2.4541 Soluble
18 R M -2.6016 Soluble
19 A M 0.0000 Buried
20 T M -0.6934 Soluble
21 L M 0.0000 Buried
22 S M -0.9685 Soluble
23 C M 0.0000 Buried
24 R M -2.3547 Soluble
25 A M 0.0000 Buried
26 S M -0.8179 Soluble
27 Q M -0.9205 Soluble
28 S M -0.9919 Soluble
29 V M 0.0000 Buried
36 S M -0.6023 Soluble
37 S M -0.3252 Soluble
38 Y M -0.1861 Soluble
39 L M 0.0000 Buried
40 A M 0.0000 Buried
41 W M 0.0000 Buried
42 Y M 0.0000 Buried
43 Q M 0.0000 Buried
44 Q M 0.0000 Buried
45 K M -1.3478 Soluble
46 P M -1.3353 Soluble
47 G M -1.4011 Soluble
48 Q M -1.9750 Soluble
49 A M -1.2224 Soluble
50 P M 0.0000 Buried
51 R M -1.0529 Soluble
52 L M 0.0000 Buried
53 L M 0.0000 Buried
54 I M 0.0000 Buried
55 Y M -0.3163 Soluble
56 D M -0.5028 Soluble
57 A M 0.0000 Buried
65 S M -1.2075 Soluble
66 N M -1.5967 Soluble
67 R M -1.5469 Soluble
68 A M -0.8149 Soluble
69 T M -0.5863 Soluble
70 G M -0.5403 Soluble
71 I M -0.4079 Soluble
72 P M -0.2941 Soluble
74 A M -0.3379 Soluble
75 R M -0.7500 Soluble
76 F M 0.0000 Buried
77 S M -0.6806 Soluble
78 G M -0.7881 Soluble
79 S M -0.9396 Soluble
80 G M -1.1029 Soluble
83 S M -1.2152 Soluble
84 G M -1.1934 Soluble
85 T M -1.8176 Soluble
86 D M -2.5046 Soluble
87 F M 0.0000 Buried
88 T M -0.8918 Soluble
89 L M 0.0000 Buried
90 T M -0.6172 Soluble
91 I M 0.0000 Buried
92 S M -1.3906 Soluble
93 S M -1.6658 Soluble
94 L M 0.0000 Buried
95 E M -1.8521 Soluble
96 P M -2.0390 Soluble
97 E M -2.1404 Soluble
98 D M 0.0000 Buried
99 F M 0.0000 Buried
100 A M 0.0000 Buried
101 V M -0.4115 Soluble
102 Y M 0.0000 Buried
103 Y M 0.0000 Buried
104 C M 0.0000 Buried
105 Q M 0.0000 Buried
106 Q M 0.0000 Buried
107 R M 0.0000 Buried
108 S M 0.0000 Buried
109 N M -1.3551 Soluble
110 W M -0.6628 Soluble
113 P M -0.5376 Soluble
114 P M -0.4170 Soluble
115 L M -0.1199 Soluble
116 F M 0.0000 Buried
117 T M 0.2194 Aggregation-prone
118 F M 0.0000 Buried
119 G M 0.0000 Buried
120 P M -0.7054 Soluble
121 G M -0.6200 Soluble
122 T M 0.0000 Buried
123 K M -1.0008 Soluble
124 V M 0.0000 Buried
125 D M -1.1854 Soluble
126 I M 0.0000 Buried
127 K M -1.4656 Soluble
128 R M -1.0519 Soluble
129 T M -0.0675 Soluble
130 V M 0.3530 Aggregation-prone
131 A M -0.0384 Soluble
132 A M -0.1043 Soluble
133 P M 0.0000 Buried
134 S M -0.0700 Soluble
135 V M 0.0525 Aggregation-prone
136 F M 0.2192 Aggregation-prone
137 I M 0.1209 Aggregation-prone
138 F M 0.0000 Buried
139 P M -0.7243 Soluble
140 P M -0.7187 Soluble
141 S M -1.4675 Soluble
142 D M -2.7218 Soluble
143 E M -2.5559 Soluble
144 Q M 0.0000 Buried
145 L M -2.1101 Soluble
146 K M -2.6682 Soluble
147 S M -1.6564 Soluble
148 G M -1.1167 Soluble
149 T M -0.8909 Soluble
150 A M 0.0000 Buried
151 S M 0.0000 Buried
152 V M 0.0000 Buried
153 V M 0.0000 Buried
154 C M 0.0000 Buried
155 L M 0.0000 Buried
156 L M 0.0000 Buried
157 N M 0.0000 Buried
158 N M -0.7564 Soluble
159 F M 0.0000 Buried
160 Y M 0.0000 Buried
161 P M -1.7117 Soluble
162 R M -3.1017 Soluble
163 E M -3.2376 Soluble
164 A M -2.3230 Soluble
165 K M -2.2876 Soluble
166 V M -1.0954 Soluble
167 Q M -0.5043 Soluble
168 W M 0.0000 Buried
169 K M -0.6255 Soluble
170 V M 0.0000 Buried
171 D M -1.8943 Soluble
172 N M -1.4654 Soluble
173 A M -0.3470 Soluble
174 L M 0.6897 Aggregation-prone
175 Q M -0.1762 Soluble
176 S M -0.3146 Soluble
177 G M -0.6732 Soluble
178 N M -0.7165 Soluble
179 S M -1.0181 Soluble
180 Q M -1.2218 Soluble
181 E M -1.8763 Soluble
182 S M -0.9773 Soluble
183 V M -0.8092 Soluble
184 T M -1.1016 Soluble
185 E M -2.1762 Soluble
186 Q M 0.0000 Buried
187 D M -1.9142 Soluble
188 S M -2.2283 Soluble
189 K M -2.5628 Soluble
190 D M -1.7676 Soluble
191 S M 0.0000 Buried
192 T M 0.0000 Buried
193 Y M -1.3225 Soluble
194 S M 0.0000 Buried
195 L M 0.0000 Buried
196 S M 0.0000 Buried
197 S M 0.0000 Buried
198 T M -0.6386 Soluble
199 L M 0.0000 Buried
200 T M -0.3918 Soluble
201 L M -0.6919 Soluble
202 S M -1.2279 Soluble
203 K M -2.0241 Soluble
204 A M -1.9236 Soluble
205 D M -2.6333 Soluble
206 Y M 0.0000 Buried
207 E M -3.3370 Soluble
208 K M -3.5393 Soluble
209 H M -2.9176 Soluble
210 K M -2.6704 Soluble
211 V M -1.2013 Soluble
212 Y M 0.0000 Buried
213 A M 0.0000 Buried
214 C M 0.0000 Buried
215 E M -1.0461 Soluble
216 V M 0.0000 Buried
217 T M -1.1369 Soluble
218 H M 0.0000 Buried
219 Q M -1.5207 Soluble
220 G M -0.4303 Soluble
221 L M -0.1934 Soluble
222 S M -0.4464 Soluble
223 S M -0.4199 Soluble
224 P M -0.6277 Soluble
225 V M -0.2112 Soluble
226 T M -0.5826 Soluble
227 K M -0.8785 Soluble
228 S M -0.6303 Soluble
229 F M 0.0000 Buried
230 N M -2.0111 Soluble
231 R M -2.3662 Soluble
232 G M -1.9938 Soluble
233 E M -2.3632 Soluble

3D Structure — colored by A4D score

Sequence - click residue to focus in viewer  |  colored by A4D score
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Color Legend (B-factor = A4D Score)
Score > 1.5 — highly aggregation-prone
Score 0.5–1.5 — aggregation-prone
Score ≈ 0 — buried
Score −1 to −0.5 — soluble
Score < −2.5 — highly soluble
pH Structure
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A4D Score Threshold
Highlight residues > threshold in the sequence panel
CDR Regions
HCDR1
HCDR2
HCDR3
LCDR1
LCDR2
LCDR3
Display Options

pH-Dependent Aggregation Profiles

A4D scores calculated across 11 pH conditions (4.0–9.0, step 0.5). Click a row to view the structure at that pH. The input structure is globular — max score is recommended for pH analysis.

pH Avg A4D Score Max A4D Score Downloads
4.0 -0.5792 3.1576 CSV PDB
4.5 -0.6178 3.1452 CSV PDB
5.0 -0.6638 3.1452 CSV PDB
5.5 -0.7082 3.1452 CSV PDB
6.0 -0.7407 3.1452 CSV PDB
6.5 -0.7537 3.1451 CSV PDB
7.0 -0.7459 3.1451 CSV PDB
7.5 -0.7233 3.1451 CSV PDB
8.0 -0.6919 3.145 CSV PDB
8.5 -0.6543 3.1448 CSV PDB
9.0 -0.6108 3.144 CSV PDB
Average A4D Score vs pH
Max A4D Score vs pH