Ficerafusp / 5gz0

A4DAB117_5gz0_B_A | Source PDB: 5gz0 | Chains: B, A | Done
98.23
Yes
10 Å
Yes
Avg A4D Score
-0.709
Max Score
1.8901
Min Score
-3.6392
Total Score
-307.72
Score CDR
-0.3431
Score non-CDR
-0.7524

Calculation Parameters

Chain Sequence(s) QVQLKQSGPGLVQPGGSLSITCTVSGFSLTNYGVHWVRQSPGKGLEWLGVIWSGGNTDYNTPFTSRLSINKDNSKSQVFFKMNSLQSNDTAIYYCARALTYYDYEFAYWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSDIQMTQSPVILSVSPGERVSFSCRASQSIGTNIHWYQQRTNGSPRLLIKYASESISGIPSRFSGSGSGTDFTLSINSVESEDIADYYCQQNNNWPTTFGAGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGA input.pdb
Selected Chain(s) B (Heavy), A (Light)
Distance of Aggregation 10 Å
FoldX Energy Minimization Yes
pH Calculations Yes
Downloads Download all data (.tar.gz)

Aggrescan4D Profile

Aggregation-prone (score > 0)
Soluble (score < 0)
Buried (score = 0)

Per-Residue A4D Scores

Download CSV
Minimum Score -3.6392
Maximum Score 1.8901
Average Score -0.709
Total Score -307.723

Residues with A4D score > 0.0 are highlighted as aggregation-prone.

Index Residue Chain A4D Score Classification
1 Q B -1.3987 Soluble
2 V B -0.7435 Soluble
3 Q B -1.5026 Soluble
4 L B 0.0000 Buried
5 K B -2.3048 Soluble
6 Q B 0.0000 Buried
7 S B -0.8366 Soluble
8 G B -1.1633 Soluble
9 P B -0.5368 Soluble
11 G B -0.4623 Soluble
12 L B 0.0027 Aggregation-prone
13 V B -0.5197 Soluble
14 Q B -1.2049 Soluble
15 P B -1.5498 Soluble
16 G B -1.5122 Soluble
17 G B -1.2976 Soluble
18 S B -1.4988 Soluble
19 L B 0.0000 Buried
20 S B -0.7239 Soluble
21 I B 0.0000 Buried
22 T B -0.5822 Soluble
23 C B 0.0000 Buried
24 T B -1.1716 Soluble
25 V B 0.0000 Buried
26 S B -1.1423 Soluble
27 G B -0.8993 Soluble
28 F B -0.4969 Soluble
29 S B -0.8808 Soluble
30 L B 0.0000 Buried
35 T B -0.8868 Soluble
36 N B -0.8462 Soluble
37 Y B 0.4339 Aggregation-prone
38 G B 0.0000 Buried
39 V B 0.0000 Buried
40 H B 0.0000 Buried
41 W B 0.0000 Buried
42 V B 0.0000 Buried
43 R B 0.0000 Buried
44 Q B -0.5031 Soluble
45 S B -0.9853 Soluble
46 P B -0.9500 Soluble
47 G B -1.6680 Soluble
48 K B -2.3241 Soluble
49 G B -1.2298 Soluble
50 L B 0.0000 Buried
51 E B -0.6842 Soluble
52 W B 0.0000 Buried
53 L B 0.0000 Buried
54 G B 0.0000 Buried
55 V B 0.0000 Buried
56 I B 0.0000 Buried
57 W B -0.5237 Soluble
58 S B -0.6047 Soluble
59 G B -1.2157 Soluble
63 G B -1.4895 Soluble
64 N B -1.8428 Soluble
65 T B -1.3041 Soluble
66 D B -1.0068 Soluble
67 Y B -0.3428 Soluble
68 N B 0.0000 Buried
69 T B -0.2013 Soluble
70 P B -0.3534 Soluble
71 F B 0.0000 Buried
72 T B -0.4401 Soluble
74 S B -0.6738 Soluble
75 R B -1.2201 Soluble
76 L B 0.0000 Buried
77 S B -1.0863 Soluble
78 I B 0.0000 Buried
79 N B -1.7722 Soluble
80 K B -1.4401 Soluble
81 D B -1.7412 Soluble
82 N B -2.1122 Soluble
83 S B -1.6294 Soluble
84 K B -2.3215 Soluble
85 S B -1.5546 Soluble
86 Q B -1.5326 Soluble
87 V B 0.0000 Buried
88 F B -0.4246 Soluble
89 F B 0.0000 Buried
90 K B -1.5317 Soluble
91 M B 0.0000 Buried
92 N B -2.1657 Soluble
93 S B -1.6274 Soluble
94 L B 0.0000 Buried
95 Q B -2.2366 Soluble
96 S B -1.6019 Soluble
97 N B -2.0883 Soluble
98 D B 0.0000 Buried
99 T B -0.5604 Soluble
100 A B 0.0000 Buried
101 I B 0.6123 Aggregation-prone
102 Y B 0.0000 Buried
103 Y B 0.0000 Buried
104 C B 0.0000 Buried
105 A B 0.0000 Buried
106 R B 0.0000 Buried
107 A B 0.0000 Buried
108 L B 1.0977 Aggregation-prone
109 T B 1.1489 Aggregation-prone
110 Y B 1.8331 Aggregation-prone
111 Y B 1.8901 Aggregation-prone
112 D B 1.0010 Aggregation-prone
113 Y B 0.5424 Aggregation-prone
114 E B 0.0000 Buried
115 F B 0.0000 Buried
116 A B 0.3159 Aggregation-prone
117 Y B 0.2849 Aggregation-prone
118 W B -0.4443 Soluble
119 G B 0.0000 Buried
120 Q B -1.8035 Soluble
121 G B -0.8770 Soluble
122 T B 0.0000 Buried
123 L B 0.2637 Aggregation-prone
124 V B 0.0000 Buried
125 T B -0.2777 Soluble
126 V B 0.0000 Buried
127 S B -0.7155 Soluble
128 A B -0.4604 Soluble
129 A B -0.2769 Soluble
130 S B -0.4481 Soluble
131 T B -0.7038 Soluble
132 K B -1.2058 Soluble
133 G B -1.3220 Soluble
134 P B -0.5885 Soluble
135 S B -0.2381 Soluble
136 V B 0.0000 Buried
137 F B 0.0000 Buried
138 P B -1.1067 Soluble
139 L B 0.0000 Buried
140 A B -1.1841 Soluble
141 P B 0.0000 Buried
142 S B -1.2315 Soluble
143 S B -1.3400 Soluble
144 K B -1.9248 Soluble
145 S B -1.1304 Soluble
146 T B -0.9547 Soluble
147 S B -0.9010 Soluble
148 G B -0.8576 Soluble
149 G B -0.9223 Soluble
150 T B -0.6194 Soluble
151 A B 0.0000 Buried
152 A B 0.0000 Buried
153 L B 0.0000 Buried
154 G B 0.0000 Buried
155 C B 0.0000 Buried
156 L B 0.0000 Buried
157 V B 0.0000 Buried
158 K B 0.0000 Buried
159 D B -0.3892 Soluble
160 Y B 0.0000 Buried
161 F B 0.0000 Buried
162 P B 0.0000 Buried
163 E B -0.3702 Soluble
164 P B -0.5875 Soluble
165 V B -0.6259 Soluble
166 T B -0.5617 Soluble
167 V B -0.4028 Soluble
168 S B -0.3964 Soluble
169 W B 0.0000 Buried
170 N B -0.7290 Soluble
171 S B -0.6475 Soluble
172 G B -0.5634 Soluble
173 A B -0.2366 Soluble
174 L B 0.0049 Aggregation-prone
175 T B -0.1840 Soluble
176 S B -0.1966 Soluble
177 G B -0.2428 Soluble
178 V B 0.1457 Aggregation-prone
179 H B -0.2721 Soluble
180 T B 0.0416 Aggregation-prone
181 F B 0.0000 Buried
182 P B -0.2732 Soluble
183 A B 0.2328 Aggregation-prone
184 V B 0.4273 Aggregation-prone
185 L B 1.1421 Aggregation-prone
186 Q B 0.2758 Aggregation-prone
187 S B -0.0663 Soluble
188 S B -0.2205 Soluble
189 G B 0.0133 Aggregation-prone
190 L B 0.1328 Aggregation-prone
191 Y B 0.4605 Aggregation-prone
192 S B 0.0000 Buried
193 L B 0.0000 Buried
194 S B 0.0000 Buried
195 S B 0.0000 Buried
196 V B 0.0000 Buried
197 V B 0.0000 Buried
198 T B -0.1339 Soluble
199 V B 0.0000 Buried
200 P B -0.6497 Soluble
201 S B -0.6248 Soluble
202 S B -0.5978 Soluble
203 S B -0.6369 Soluble
204 L B -0.7673 Soluble
205 G B -0.9547 Soluble
206 T B -0.7216 Soluble
207 Q B -1.2719 Soluble
208 T B -1.1299 Soluble
209 Y B 0.0000 Buried
210 I B -1.1919 Soluble
211 C B 0.0000 Buried
212 N B -1.5158 Soluble
213 V B 0.0000 Buried
214 N B -1.9752 Soluble
215 H B 0.0000 Buried
216 K B -2.8082 Soluble
217 P B -1.6076 Soluble
218 S B -1.8006 Soluble
219 N B -2.5700 Soluble
220 T B -2.0509 Soluble
221 K B -2.6759 Soluble
222 V B -1.4619 Soluble
223 D B -2.6140 Soluble
224 K B -2.1613 Soluble
225 R B -2.7384 Soluble
226 V B 0.0000 Buried
227 E B -2.8875 Soluble
228 P B -1.9504 Soluble
229 K B -2.3718 Soluble
230 S B -1.2948 Soluble
1 D A -2.2357 Soluble
2 I A 0.0000 Buried
3 Q A -2.0846 Soluble
4 M A 0.0000 Buried
5 T A -1.0182 Soluble
6 Q A -0.3216 Soluble
7 S A -0.0098 Soluble
8 P A 0.6371 Aggregation-prone
9 V A 1.7052 Aggregation-prone
10 I A 1.1533 Aggregation-prone
11 L A 0.4652 Aggregation-prone
12 S A -0.2068 Soluble
13 V A -1.0960 Soluble
14 S A -1.7222 Soluble
15 P A -2.0692 Soluble
16 G A -2.3581 Soluble
17 E A -3.0891 Soluble
18 R A -3.1659 Soluble
19 V A 0.0000 Buried
20 S A -0.8336 Soluble
21 F A 0.0000 Buried
22 S A -1.0176 Soluble
23 C A 0.0000 Buried
24 R A -2.6610 Soluble
25 A A 0.0000 Buried
26 S A -1.9652 Soluble
27 Q A -2.4008 Soluble
28 S A -1.6829 Soluble
29 I A 0.0000 Buried
36 G A -1.0751 Soluble
37 T A -0.7764 Soluble
38 N A -0.8117 Soluble
39 I A 0.0000 Buried
40 H A 0.0000 Buried
41 W A 0.0000 Buried
42 Y A 0.0000 Buried
43 Q A 0.0000 Buried
44 Q A -1.1709 Soluble
45 R A -2.0067 Soluble
46 T A -1.6898 Soluble
47 N A -1.9819 Soluble
48 G A -1.4844 Soluble
49 S A -1.0309 Soluble
50 P A 0.0000 Buried
51 R A -0.6466 Soluble
52 L A 0.0000 Buried
53 L A 0.0000 Buried
54 I A 0.0000 Buried
55 K A -0.7086 Soluble
56 Y A -0.4626 Soluble
57 A A 0.0000 Buried
65 S A -1.1871 Soluble
66 E A -1.8310 Soluble
67 S A -1.1203 Soluble
68 I A -0.4888 Soluble
69 S A -0.3514 Soluble
70 G A -0.4813 Soluble
71 I A -0.2712 Soluble
72 P A -0.4493 Soluble
74 S A -0.6301 Soluble
75 R A -1.1225 Soluble
76 F A 0.0000 Buried
77 S A -0.9146 Soluble
78 G A -0.6934 Soluble
79 S A -0.8666 Soluble
80 G A -1.1435 Soluble
83 S A -1.1830 Soluble
84 G A -1.4304 Soluble
85 T A -1.9843 Soluble
86 D A -2.7235 Soluble
87 F A 0.0000 Buried
88 T A -0.8957 Soluble
89 L A 0.0000 Buried
90 S A 0.0000 Buried
91 I A 0.0000 Buried
92 N A -2.6787 Soluble
93 S A -2.5845 Soluble
94 V A 0.0000 Buried
95 E A -2.9774 Soluble
96 S A -2.5493 Soluble
97 E A -2.7556 Soluble
98 D A 0.0000 Buried
99 I A 0.0000 Buried
100 A A -1.3792 Soluble
101 D A -0.5831 Soluble
102 Y A 0.0000 Buried
103 Y A 0.0000 Buried
104 C A 0.0000 Buried
105 Q A 0.0000 Buried
106 Q A 0.0000 Buried
107 N A -0.7573 Soluble
108 N A -1.4881 Soluble
109 N A -1.4591 Soluble
114 W A -0.1693 Soluble
115 P A -0.3904 Soluble
116 T A 0.0000 Buried
117 T A -0.6798 Soluble
118 F A -0.1614 Soluble
119 G A 0.0000 Buried
120 A A -0.3826 Soluble
121 G A 0.0000 Buried
122 T A 0.0000 Buried
123 K A -0.5111 Soluble
124 L A 0.0000 Buried
125 E A 0.0000 Buried
126 L A 0.0000 Buried
127 K A -1.3806 Soluble
128 R A -1.0812 Soluble
129 T A 0.0310 Aggregation-prone
130 V A 0.7936 Aggregation-prone
131 A A 0.1995 Aggregation-prone
132 A A 0.0344 Aggregation-prone
133 P A 0.0000 Buried
134 S A -0.1003 Soluble
135 V A -0.0763 Soluble
136 F A 0.0000 Buried
137 I A 0.0000 Buried
138 F A 0.0000 Buried
139 P A -0.5101 Soluble
140 P A 0.0000 Buried
141 S A -1.4165 Soluble
142 D A -2.6280 Soluble
143 E A -2.3680 Soluble
144 Q A 0.0000 Buried
145 L A -2.0204 Soluble
146 K A -2.6138 Soluble
147 S A -1.6150 Soluble
148 G A -1.2982 Soluble
149 T A -0.8492 Soluble
150 A A 0.0000 Buried
151 S A 0.0000 Buried
152 V A 0.0000 Buried
153 V A 0.0000 Buried
154 C A 0.0000 Buried
155 L A 0.0000 Buried
156 L A 0.0000 Buried
157 N A 0.0000 Buried
158 N A -0.7918 Soluble
159 F A 0.0000 Buried
160 Y A 0.0000 Buried
161 P A -1.3408 Soluble
162 R A -2.2386 Soluble
163 E A -2.7588 Soluble
164 A A -1.9327 Soluble
165 K A -2.0530 Soluble
166 V A -1.0519 Soluble
167 Q A -0.6986 Soluble
168 W A 0.0000 Buried
169 K A -0.8282 Soluble
170 V A 0.0000 Buried
171 D A -2.1438 Soluble
172 N A -1.6906 Soluble
173 A A -0.5346 Soluble
174 L A 0.1886 Aggregation-prone
175 Q A -0.6276 Soluble
176 S A -0.7277 Soluble
177 G A -1.2096 Soluble
178 N A -1.4487 Soluble
179 S A -1.4570 Soluble
180 Q A -1.4982 Soluble
181 E A -1.8505 Soluble
182 S A -0.8115 Soluble
183 V A -0.4763 Soluble
184 T A -0.9004 Soluble
185 E A -2.2389 Soluble
186 Q A -1.7005 Soluble
187 D A -2.0215 Soluble
188 S A -2.4284 Soluble
189 K A -2.6449 Soluble
190 D A -1.7732 Soluble
191 S A 0.0000 Buried
192 T A 0.0000 Buried
193 Y A 0.0000 Buried
194 S A 0.0000 Buried
195 L A 0.0000 Buried
196 S A 0.0000 Buried
197 S A 0.0000 Buried
198 T A -0.7644 Soluble
199 L A 0.0000 Buried
200 T A -0.6045 Soluble
201 L A -0.8071 Soluble
202 S A -1.0685 Soluble
203 K A -1.9992 Soluble
204 A A -1.8892 Soluble
205 D A -2.6768 Soluble
206 Y A 0.0000 Buried
207 E A -3.4469 Soluble
208 K A -3.6392 Soluble
209 H A -3.0457 Soluble
210 K A -2.9205 Soluble
211 V A -1.4617 Soluble
212 Y A 0.0000 Buried
213 A A 0.0000 Buried
214 C A 0.0000 Buried
215 E A -0.7077 Soluble
216 V A 0.0000 Buried
217 T A -1.0950 Soluble
218 H A 0.0000 Buried
219 Q A -1.5886 Soluble
220 G A -0.3345 Soluble
221 L A -0.1826 Soluble
222 S A -0.4649 Soluble
223 S A -0.4183 Soluble
224 P A -0.5120 Soluble
225 V A -0.0280 Soluble
226 T A -0.4443 Soluble
227 K A -0.7533 Soluble
228 S A -0.6630 Soluble
229 F A -0.8222 Soluble
230 N A -1.4906 Soluble
231 R A -1.8481 Soluble
232 G A -1.1832 Soluble
233 A A -0.6635 Soluble

3D Structure — colored by A4D score

Sequence - click residue to focus in viewer  |  colored by A4D score
Load structure to view sequence…
Color Legend (B-factor = A4D Score)
Score > 1.5 — highly aggregation-prone
Score 0.5–1.5 — aggregation-prone
Score ≈ 0 — buried
Score −1 to −0.5 — soluble
Score < −2.5 — highly soluble
pH Structure
Load structure at specific pH condition
A4D Score Threshold
Highlight residues > threshold in the sequence panel
CDR Regions
HCDR1
HCDR2
HCDR3
LCDR1
LCDR2
LCDR3
Display Options

pH-Dependent Aggregation Profiles

A4D scores calculated across 11 pH conditions (4.0–9.0, step 0.5). Click a row to view the structure at that pH. The input structure is globular — max score is recommended for pH analysis.

pH Avg A4D Score Max A4D Score Downloads
4.0 -0.7005 2.2748 CSV PDB
4.5 -0.737 2.205 CSV PDB
5.0 -0.781 2.1501 CSV PDB
5.5 -0.8238 2.1359 CSV PDB
6.0 -0.8548 2.1231 CSV PDB
6.5 -0.8652 2.1102 CSV PDB
7.0 -0.8539 2.0974 CSV PDB
7.5 -0.8279 2.0847 CSV PDB
8.0 -0.7938 2.0726 CSV PDB
8.5 -0.7543 2.1537 CSV PDB
9.0 -0.7094 2.2385 CSV PDB
Average A4D Score vs pH
Max A4D Score vs pH