Cetuximab / 6azk

A4DAB063_6azk_B_A | Source PDB: 6azk | Chains: B, A | Done
100
Yes
10 Å
Yes
Avg A4D Score
-0.6752
Max Score
1.7363
Min Score
-3.4558
Total Score
-288.98
Score CDR
-0.3353
Score non-CDR
-0.7161

Calculation Parameters

Chain Sequence(s) QVQLKQSGPGLVQPSQSLSITCTVSGFSLTNYGVHWVRQSPGKGLEWLGVIWSGGNTDYNTPFTSRLSINKDNSKSQVFFKMNSLQSNDTAIYYCARALTYYDYEFAYWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPDILLTQSPVILSVSPGERVSFSCRASQSIGTNIHWYQQRTNGSPRLLIKYASESISGIPSRFSGSGSGTDFTLSINSVESEDIADYYCQQNNNWPTTFGAGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG input.pdb
Selected Chain(s) B (Heavy), A (Light)
Distance of Aggregation 10 Å
FoldX Energy Minimization Yes
pH Calculations Yes
Downloads Download all data (.tar.gz)

Aggrescan4D Profile

Aggregation-prone (score > 0)
Soluble (score < 0)
Buried (score = 0)

Per-Residue A4D Scores

Download CSV
Minimum Score -3.4558
Maximum Score 1.7363
Average Score -0.6752
Total Score -288.9807

Residues with A4D score > 0.0 are highlighted as aggregation-prone.

Index Residue Chain A4D Score Classification
1 Q B -1.4075 Soluble
2 V B -0.7528 Soluble
3 Q B -1.6211 Soluble
4 L B 0.0000 Buried
5 K B -2.3473 Soluble
6 Q B 0.0000 Buried
7 S B -0.8461 Soluble
8 G B -1.1198 Soluble
9 P B -0.4432 Soluble
11 G B -0.4843 Soluble
12 L B 0.0634 Aggregation-prone
13 V B 0.0000 Buried
14 Q B -0.9630 Soluble
15 P B -1.0826 Soluble
16 S B -1.2107 Soluble
17 Q B -1.7564 Soluble
18 S B -1.5767 Soluble
19 L B 0.0000 Buried
20 S B -0.6757 Soluble
21 I B 0.0000 Buried
22 T B -0.4930 Soluble
23 C B 0.0000 Buried
24 T B -1.1597 Soluble
25 V B 0.0000 Buried
26 S B -1.2412 Soluble
27 G B -0.9469 Soluble
28 F B -0.5255 Soluble
29 S B -0.8607 Soluble
30 L B 0.0000 Buried
35 T B -0.9283 Soluble
36 N B -0.9416 Soluble
37 Y B 0.2522 Aggregation-prone
38 G B 0.0000 Buried
39 V B 0.0000 Buried
40 H B 0.0000 Buried
41 W B 0.0000 Buried
42 V B 0.0000 Buried
43 R B 0.0000 Buried
44 Q B -0.4782 Soluble
45 S B -1.0423 Soluble
46 P B -1.2035 Soluble
47 G B -1.7611 Soluble
48 K B -2.2182 Soluble
49 G B -1.1230 Soluble
50 L B 0.0000 Buried
51 E B 0.0000 Buried
52 W B 0.0000 Buried
53 L B 0.0000 Buried
54 G B 0.0000 Buried
55 V B 0.0000 Buried
56 I B 0.0000 Buried
57 W B -0.6019 Soluble
58 S B -0.6859 Soluble
59 G B -1.2074 Soluble
63 G B -1.5315 Soluble
64 N B -1.8541 Soluble
65 T B -1.3194 Soluble
66 D B -1.0479 Soluble
67 Y B -0.4411 Soluble
68 N B -0.2198 Soluble
69 T B -0.2529 Soluble
70 P B -0.4052 Soluble
71 F B 0.0000 Buried
72 T B -0.5013 Soluble
74 S B -0.6671 Soluble
75 R B -1.1590 Soluble
76 L B 0.0000 Buried
77 S B -1.1061 Soluble
78 I B 0.0000 Buried
79 N B -1.7269 Soluble
80 K B -1.4589 Soluble
81 D B -1.8107 Soluble
82 N B -2.2120 Soluble
83 S B -1.6809 Soluble
84 K B -2.3783 Soluble
85 S B -1.5736 Soluble
86 Q B -1.5163 Soluble
87 V B 0.0000 Buried
88 F B -0.2207 Soluble
89 F B 0.0000 Buried
90 K B -1.5318 Soluble
91 M B 0.0000 Buried
92 N B -2.0238 Soluble
93 S B -1.3899 Soluble
94 L B -1.0911 Soluble
97 N B -1.6470 Soluble
98 D B -0.8026 Soluble
99 T B -0.3508 Soluble
100 A B 0.0000 Buried
101 I B 0.4691 Aggregation-prone
102 Y B 0.0000 Buried
103 Y B 0.0000 Buried
104 C B 0.0000 Buried
105 A B 0.0000 Buried
106 R B 0.0000 Buried
107 A B 0.0000 Buried
108 L B 0.8913 Aggregation-prone
109 T B 0.8803 Aggregation-prone
110 Y B 1.4091 Aggregation-prone
111 Y B 1.6623 Aggregation-prone
112 D B 0.8060 Aggregation-prone
113 Y B 0.0000 Buried
114 E B 0.0000 Buried
115 F B 0.0000 Buried
116 A B 0.2603 Aggregation-prone
117 Y B 0.2049 Aggregation-prone
118 W B -0.4844 Soluble
119 G B 0.0000 Buried
120 Q B -1.8314 Soluble
121 G B -0.8995 Soluble
122 T B 0.0000 Buried
123 L B 0.3248 Aggregation-prone
124 V B 0.0000 Buried
125 T B -0.0286 Soluble
126 V B -0.3197 Soluble
127 S B -0.2734 Soluble
128 A B -0.2937 Soluble
129 A B -0.2174 Soluble
130 S B -0.4791 Soluble
131 T B -0.7396 Soluble
132 K B -1.2343 Soluble
133 G B -1.2624 Soluble
134 P B 0.0000 Buried
135 S B -0.3570 Soluble
136 V B 0.0000 Buried
137 F B -0.6515 Soluble
138 P B -1.0836 Soluble
139 L B 0.0000 Buried
140 A B -1.0514 Soluble
141 P B 0.0000 Buried
142 S B -1.1054 Soluble
144 K B -1.9424 Soluble
145 S B 0.0000 Buried
146 T B -1.0047 Soluble
147 S B -0.9585 Soluble
148 G B -0.8561 Soluble
149 G B -0.9187 Soluble
150 T B -0.6488 Soluble
151 A B 0.0000 Buried
152 A B 0.0000 Buried
153 L B 0.0000 Buried
154 G B 0.0000 Buried
155 C B 0.0000 Buried
156 L B 0.0000 Buried
157 V B 0.0000 Buried
158 K B 0.0000 Buried
159 D B -0.4518 Soluble
160 Y B 0.0000 Buried
161 F B 0.0000 Buried
162 P B 0.0000 Buried
163 E B -0.2692 Soluble
164 P B -0.4674 Soluble
165 V B -0.4966 Soluble
166 T B -0.4737 Soluble
167 V B -0.2750 Soluble
168 S B -0.3416 Soluble
169 W B 0.0000 Buried
170 N B -0.8703 Soluble
171 S B -0.6485 Soluble
172 G B -0.5405 Soluble
173 A B -0.2499 Soluble
174 L B -0.0232 Soluble
175 T B -0.1797 Soluble
176 S B -0.1873 Soluble
177 G B -0.2332 Soluble
178 V B 0.1596 Aggregation-prone
179 H B -0.3097 Soluble
180 T B -0.1532 Soluble
181 F B 0.0000 Buried
182 P B -0.2761 Soluble
183 A B 0.2753 Aggregation-prone
184 V B 0.5014 Aggregation-prone
185 L B 0.9495 Aggregation-prone
186 Q B 0.1936 Aggregation-prone
187 S B -0.1150 Soluble
188 S B -0.2482 Soluble
189 G B 0.0092 Aggregation-prone
190 L B 0.0982 Aggregation-prone
191 Y B 0.4093 Aggregation-prone
192 S B 0.0000 Buried
193 L B 0.0000 Buried
194 S B 0.0000 Buried
195 S B 0.0000 Buried
196 V B 0.0000 Buried
197 V B 0.0000 Buried
198 T B -0.1277 Soluble
199 V B 0.0000 Buried
200 P B -0.5462 Soluble
201 S B -0.6078 Soluble
202 S B -0.6064 Soluble
203 S B -0.6577 Soluble
204 L B -0.8599 Soluble
205 G B -0.9907 Soluble
206 T B -0.7714 Soluble
207 Q B -1.3077 Soluble
208 T B -1.1906 Soluble
209 Y B 0.0000 Buried
210 I B -1.3306 Soluble
211 C B 0.0000 Buried
212 N B -1.3421 Soluble
213 V B 0.0000 Buried
214 N B -1.6578 Soluble
215 H B 0.0000 Buried
216 K B -2.3890 Soluble
217 P B -1.4131 Soluble
218 S B -1.6681 Soluble
219 N B -2.4333 Soluble
220 T B -1.9156 Soluble
221 K B -2.4722 Soluble
222 V B -1.3792 Soluble
223 D B -2.1981 Soluble
224 K B -2.0518 Soluble
225 R B -2.5889 Soluble
226 V B 0.0000 Buried
227 E B -2.5180 Soluble
228 P B -1.2169 Soluble
1 D A -1.4057 Soluble
2 I A 0.0000 Buried
3 L A 0.5985 Aggregation-prone
4 L A 0.0000 Buried
5 T A -0.3400 Soluble
6 Q A 0.0000 Buried
7 S A 0.0544 Aggregation-prone
8 P A 0.7723 Aggregation-prone
9 V A 1.7363 Aggregation-prone
10 I A 1.2752 Aggregation-prone
11 L A 0.5487 Aggregation-prone
12 S A -0.2352 Soluble
13 V A -1.0516 Soluble
14 S A -1.6797 Soluble
15 P A -1.8161 Soluble
16 G A -2.1656 Soluble
17 E A -3.0380 Soluble
18 R A -3.3844 Soluble
19 V A 0.0000 Buried
20 S A -0.6821 Soluble
21 F A 0.0000 Buried
22 S A -0.7313 Soluble
23 C A 0.0000 Buried
24 R A -2.4228 Soluble
25 A A -1.3121 Soluble
26 S A -0.9994 Soluble
27 Q A -1.5930 Soluble
28 S A -1.4995 Soluble
29 I A 0.0000 Buried
36 G A -0.9762 Soluble
37 T A -0.7336 Soluble
38 N A -0.8046 Soluble
39 I A 0.0000 Buried
40 H A 0.0000 Buried
41 W A 0.0000 Buried
42 Y A 0.0000 Buried
43 Q A 0.0000 Buried
44 Q A -1.3453 Soluble
45 R A -1.8814 Soluble
46 T A -1.7153 Soluble
47 N A -1.9853 Soluble
48 G A -1.4897 Soluble
49 S A -0.9601 Soluble
50 P A 0.0000 Buried
51 R A -0.6648 Soluble
52 L A 0.0000 Buried
53 L A 0.0000 Buried
54 I A 0.0000 Buried
55 K A -0.6619 Soluble
56 Y A -0.4961 Soluble
57 A A 0.0000 Buried
65 S A -1.2602 Soluble
66 E A -1.9723 Soluble
67 S A -1.1762 Soluble
68 I A -0.5205 Soluble
69 S A -0.3411 Soluble
70 G A -0.4692 Soluble
71 I A -0.2386 Soluble
72 P A -0.3027 Soluble
74 S A -0.6043 Soluble
75 R A -1.1384 Soluble
76 F A 0.0000 Buried
77 S A -0.9452 Soluble
78 G A -0.7213 Soluble
79 S A -0.8238 Soluble
80 G A -1.0738 Soluble
83 S A -1.0780 Soluble
84 G A -1.2788 Soluble
85 T A -1.8223 Soluble
86 D A -2.3542 Soluble
87 F A 0.0000 Buried
88 T A -0.7893 Soluble
89 L A 0.0000 Buried
90 S A -0.9348 Soluble
91 I A 0.0000 Buried
92 N A -2.7479 Soluble
93 S A -2.4361 Soluble
94 V A 0.0000 Buried
95 E A -1.9859 Soluble
96 S A -1.8759 Soluble
97 E A -1.7718 Soluble
98 D A 0.0000 Buried
99 I A -1.3673 Soluble
100 A A 0.0000 Buried
101 D A -1.1312 Soluble
102 Y A 0.0000 Buried
103 Y A 0.0000 Buried
104 C A 0.0000 Buried
105 Q A 0.0000 Buried
106 Q A 0.0000 Buried
107 N A -0.7516 Soluble
108 N A -1.2914 Soluble
109 N A -1.0421 Soluble
114 W A 0.1005 Aggregation-prone
115 P A 0.0000 Buried
116 T A 0.0000 Buried
117 T A -0.0376 Soluble
118 F A 0.2009 Aggregation-prone
119 G A 0.0000 Buried
120 A A -0.0479 Soluble
121 G A -0.0338 Soluble
122 T A 0.0000 Buried
123 K A -0.8173 Soluble
124 L A 0.0000 Buried
125 E A -0.7945 Soluble
126 L A 0.0000 Buried
127 K A -1.5387 Soluble
128 R A -1.1893 Soluble
129 T A -0.1344 Soluble
130 V A 0.3430 Aggregation-prone
131 A A 0.1568 Aggregation-prone
132 A A -0.0939 Soluble
133 P A 0.0000 Buried
134 S A -0.2260 Soluble
135 V A 0.0000 Buried
136 F A 0.0000 Buried
137 I A 0.0000 Buried
138 F A 0.0000 Buried
139 P A -0.8469 Soluble
140 P A -0.8116 Soluble
141 S A -1.5533 Soluble
142 D A -2.8740 Soluble
143 E A -2.7542 Soluble
144 Q A 0.0000 Buried
145 L A -2.2400 Soluble
146 K A -2.8020 Soluble
147 S A -1.7472 Soluble
148 G A -1.4562 Soluble
149 T A -1.1842 Soluble
150 A A 0.0000 Buried
151 S A 0.0000 Buried
152 V A 0.0000 Buried
153 V A 0.0000 Buried
154 C A 0.0000 Buried
155 L A 0.0000 Buried
156 L A 0.0000 Buried
157 N A 0.0000 Buried
158 N A -0.9487 Soluble
159 F A 0.0000 Buried
160 Y A -1.1564 Soluble
161 P A -1.7288 Soluble
162 R A -2.9247 Soluble
163 E A -3.2490 Soluble
164 A A -2.3232 Soluble
165 K A -2.2627 Soluble
166 V A -1.0618 Soluble
167 Q A -0.7284 Soluble
168 W A 0.0000 Buried
169 K A -0.6243 Soluble
170 V A 0.0000 Buried
171 D A -1.9964 Soluble
172 N A -1.3472 Soluble
173 A A -0.2743 Soluble
174 L A 0.6944 Aggregation-prone
175 Q A -0.2212 Soluble
176 S A -0.4276 Soluble
177 G A -0.9247 Soluble
178 N A -0.8785 Soluble
179 S A -1.0391 Soluble
180 Q A -1.2244 Soluble
181 E A -1.5328 Soluble
182 S A -0.8287 Soluble
183 V A -0.8043 Soluble
184 T A -1.1570 Soluble
185 E A -2.3453 Soluble
186 Q A 0.0000 Buried
187 D A -1.8992 Soluble
188 S A -2.0913 Soluble
189 K A -2.5300 Soluble
190 D A -1.9632 Soluble
191 S A 0.0000 Buried
192 T A 0.0000 Buried
193 Y A 0.0000 Buried
194 S A 0.0000 Buried
195 L A 0.0000 Buried
196 S A 0.0000 Buried
197 S A 0.0000 Buried
198 T A -0.6048 Soluble
199 L A 0.0000 Buried
200 T A -0.3173 Soluble
201 L A -0.6103 Soluble
202 S A -0.9736 Soluble
203 K A -1.9696 Soluble
204 A A -1.7925 Soluble
205 D A -2.3630 Soluble
206 Y A 0.0000 Buried
207 E A -3.1219 Soluble
208 K A -3.4558 Soluble
209 H A -2.9802 Soluble
210 K A -3.0732 Soluble
211 V A -1.6280 Soluble
212 Y A 0.0000 Buried
213 A A -0.8853 Soluble
214 C A 0.0000 Buried
215 E A -0.9751 Soluble
216 V A 0.0000 Buried
217 T A -1.2704 Soluble
218 H A 0.0000 Buried
219 Q A -1.7348 Soluble
220 G A -0.4089 Soluble
221 L A -0.2294 Soluble
222 S A -0.4480 Soluble
223 S A -0.4276 Soluble
224 P A -0.6351 Soluble
225 V A -0.0373 Soluble
226 T A -0.4258 Soluble
227 K A -0.9489 Soluble
228 S A -0.9074 Soluble
229 F A 0.0000 Buried
230 N A -2.1158 Soluble
231 R A -2.3133 Soluble
232 G A -1.3162 Soluble

3D Structure — colored by A4D score

Sequence - click residue to focus in viewer  |  colored by A4D score
Load structure to view sequence…
Color Legend (B-factor = A4D Score)
Score > 1.5 — highly aggregation-prone
Score 0.5–1.5 — aggregation-prone
Score ≈ 0 — buried
Score −1 to −0.5 — soluble
Score < −2.5 — highly soluble
pH Structure
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A4D Score Threshold
Highlight residues > threshold in the sequence panel
CDR Regions
HCDR1
HCDR2
HCDR3
LCDR1
LCDR2
LCDR3
Display Options

pH-Dependent Aggregation Profiles

A4D scores calculated across 11 pH conditions (4.0–9.0, step 0.5). Click a row to view the structure at that pH. The input structure is globular — max score is recommended for pH analysis.

pH Avg A4D Score Max A4D Score Downloads
4.0 -0.6726 2.5754 CSV PDB
4.5 -0.7086 2.5085 CSV PDB
5.0 -0.7514 2.4284 CSV PDB
5.5 -0.7926 2.3429 CSV PDB
6.0 -0.822 2.2556 CSV PDB
6.5 -0.831 2.1678 CSV PDB
7.0 -0.8191 2.08 CSV PDB
7.5 -0.7933 1.9931 CSV PDB
8.0 -0.7601 2.0621 CSV PDB
8.5 -0.7218 2.1593 CSV PDB
9.0 -0.6784 2.261 CSV PDB
Average A4D Score vs pH
Max A4D Score vs pH