Efalizumab / 3eoa

A4DAB098_3eoa_B_A | Source PDB: 3eoa | Chains: B, A | Done
100
Yes
10 Å
Yes
Avg A4D Score
-0.7497
Max Score
2.5178
Min Score
-3.6401
Total Score
-321.6
Score CDR
-0.5215
Score non-CDR
-0.7784

Calculation Parameters

Chain Sequence(s) EVQLVESGGGLVQPGGSLRLSCAASGYSFTGHWMNWVRQAPGKGLEWVGMIHPSDSETRYNQKFKDRFTISVDKSKNTLYLQMNSLRAEDTAVYYCARGIYFYGTTYFDYWGQGTLVTVSSASTKGPSVFPLAPSSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEDIQMTQSPSSLSASVGDRVTITCRASKTISKYLAWYQQKPGKAPKLLIYSGSTLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHNEYPLTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC input.pdb
Selected Chain(s) B (Heavy), A (Light)
Distance of Aggregation 10 Å
FoldX Energy Minimization Yes
pH Calculations Yes
Downloads Download all data (.tar.gz)

Aggrescan4D Profile

Aggregation-prone (score > 0)
Soluble (score < 0)
Buried (score = 0)

Per-Residue A4D Scores

Download CSV
Minimum Score -3.6401
Maximum Score 2.5178
Average Score -0.7497
Total Score -321.6016

Residues with A4D score > 0.0 are highlighted as aggregation-prone.

Index Residue Chain A4D Score Classification
1 E B -2.1828 Soluble
2 V B -1.3074 Soluble
3 Q B -1.2528 Soluble
4 L B 0.0000 Buried
5 V B 1.1379 Aggregation-prone
6 E B 0.0000 Buried
7 S B -0.3879 Soluble
8 G B -0.9136 Soluble
9 G B -0.7725 Soluble
11 G B -0.4806 Soluble
12 L B -0.2341 Soluble
13 V B 0.0000 Buried
14 Q B -1.6807 Soluble
15 P B -1.9346 Soluble
16 G B -1.6806 Soluble
17 G B -1.3948 Soluble
18 S B -1.5397 Soluble
19 L B -1.5245 Soluble
20 R B -2.4268 Soluble
21 L B 0.0000 Buried
22 S B -0.3893 Soluble
23 C B 0.0000 Buried
24 A B -0.2946 Soluble
25 A B 0.0000 Buried
26 S B -1.0762 Soluble
27 G B -1.4522 Soluble
28 Y B -0.7109 Soluble
29 S B -0.3823 Soluble
30 F B 0.0000 Buried
35 T B -0.9309 Soluble
36 G B -0.3838 Soluble
37 H B -0.1509 Soluble
38 W B -0.1749 Soluble
39 M B 0.0000 Buried
40 N B 0.0000 Buried
41 W B 0.0000 Buried
42 V B 0.0000 Buried
43 R B -0.5134 Soluble
44 Q B -0.8094 Soluble
45 A B -1.1434 Soluble
46 P B -0.9308 Soluble
47 G B -1.4354 Soluble
48 K B -2.3597 Soluble
49 G B -1.5757 Soluble
50 L B 0.0000 Buried
51 E B -0.8301 Soluble
52 W B 0.0000 Buried
53 V B 0.0000 Buried
54 G B 0.0000 Buried
55 M B 0.0000 Buried
56 I B 0.0000 Buried
57 H B -1.4718 Soluble
58 P B 0.0000 Buried
59 S B -1.7965 Soluble
62 D B -2.7072 Soluble
63 S B -2.3959 Soluble
64 E B -2.8210 Soluble
65 T B -1.8009 Soluble
66 R B -1.8880 Soluble
67 Y B -1.6460 Soluble
68 N B 0.0000 Buried
69 Q B -2.9640 Soluble
70 K B -3.0762 Soluble
71 F B 0.0000 Buried
72 K B -3.6401 Soluble
74 D B -3.3716 Soluble
75 R B -2.4030 Soluble
76 F B 0.0000 Buried
77 T B -1.4143 Soluble
78 I B 0.0000 Buried
79 S B -0.6937 Soluble
80 V B -1.1472 Soluble
81 D B -2.0191 Soluble
82 K B -2.9629 Soluble
83 S B -2.1403 Soluble
84 K B -2.6955 Soluble
85 N B -2.1221 Soluble
86 T B 0.0000 Buried
87 L B 0.0000 Buried
88 Y B 0.0000 Buried
89 L B 0.0000 Buried
90 Q B -1.8767 Soluble
91 M B 0.0000 Buried
92 N B -2.3687 Soluble
93 S B -1.7476 Soluble
94 L B 0.0000 Buried
95 R B -2.6036 Soluble
96 A B -1.8140 Soluble
97 E B -2.2789 Soluble
98 D B 0.0000 Buried
99 T B -0.8192 Soluble
100 A B 0.0000 Buried
101 V B 0.0923 Aggregation-prone
102 Y B 0.0000 Buried
103 Y B 0.0000 Buried
104 C B 0.0000 Buried
105 A B 0.0000 Buried
106 R B 0.0000 Buried
107 G B 0.0000 Buried
108 I B 0.0000 Buried
109 Y B 1.6812 Aggregation-prone
110 F B 2.5178 Aggregation-prone
111 Y B 1.5557 Aggregation-prone
112A G B 0.1911 Aggregation-prone
112 T B 0.0000 Buried
113 T B 0.0000 Buried
114 Y B 0.0000 Buried
115 F B 0.0000 Buried
116 D B -0.1213 Soluble
117 Y B 0.1688 Aggregation-prone
118 W B -0.2083 Soluble
119 G B 0.0000 Buried
120 Q B -1.3529 Soluble
121 G B -0.6642 Soluble
122 T B -0.1135 Soluble
123 L B 0.0282 Aggregation-prone
124 V B 0.0000 Buried
125 T B -0.5880 Soluble
126 V B 0.0000 Buried
127 S B -1.0341 Soluble
128 S B -0.8563 Soluble
129 A B -0.5193 Soluble
130 S B -0.6797 Soluble
131 T B -0.8999 Soluble
132 K B -1.6138 Soluble
133 G B -1.6305 Soluble
134 P B 0.0000 Buried
135 S B -0.3442 Soluble
136 V B 0.0000 Buried
137 F B -0.7249 Soluble
138 P B -1.1496 Soluble
139 L B 0.0000 Buried
140 A B -0.6195 Soluble
141 P B -0.4456 Soluble
142 S B -0.3699 Soluble
143 S B -0.3047 Soluble
144 G B -0.6454 Soluble
145 T B -0.5054 Soluble
146 A B 0.0000 Buried
147 A B 0.0000 Buried
148 L B 0.0000 Buried
149 G B 0.0000 Buried
150 C B 0.0000 Buried
151 L B 0.0000 Buried
152 V B 0.0000 Buried
153 K B 0.0000 Buried
154 D B -0.7980 Soluble
155 Y B 0.0000 Buried
156 F B 0.0000 Buried
157 P B 0.0000 Buried
158 E B -0.6864 Soluble
159 P B -0.6574 Soluble
160 V B -0.6862 Soluble
161 T B -0.5742 Soluble
162 V B -0.1605 Soluble
163 S B -0.3684 Soluble
164 W B 0.0000 Buried
165 N B -0.7875 Soluble
166 S B -0.6385 Soluble
167 G B -0.5686 Soluble
168 A B -0.2483 Soluble
169 L B 0.0120 Aggregation-prone
170 T B -0.1221 Soluble
171 S B -0.1048 Soluble
172 G B -0.0425 Soluble
173 V B 0.2560 Aggregation-prone
174 H B -0.2121 Soluble
175 T B -0.0971 Soluble
176 F B 0.0000 Buried
177 P B -0.2800 Soluble
178 A B 0.1061 Aggregation-prone
179 V B 0.3104 Aggregation-prone
180 L B 0.9749 Aggregation-prone
181 Q B 0.1061 Aggregation-prone
182 S B -0.1671 Soluble
183 S B -0.2759 Soluble
184 G B -0.0401 Soluble
185 L B -0.0575 Soluble
186 Y B 0.2658 Aggregation-prone
187 S B 0.0000 Buried
188 L B 0.0000 Buried
189 S B 0.0000 Buried
190 S B 0.0000 Buried
191 V B 0.0000 Buried
192 V B 0.0000 Buried
193 T B -0.0965 Soluble
194 V B 0.0000 Buried
195 P B -0.4952 Soluble
196 S B -0.5914 Soluble
197 S B -0.6231 Soluble
198 S B -0.6339 Soluble
199 L B -0.6738 Soluble
200 G B -0.6819 Soluble
201 T B -0.7640 Soluble
202 Q B -1.1857 Soluble
203 T B -1.1380 Soluble
204 Y B 0.0000 Buried
205 I B -1.2991 Soluble
206 C B 0.0000 Buried
207 N B -1.3470 Soluble
208 V B 0.0000 Buried
209 N B -1.8821 Soluble
210 H B 0.0000 Buried
211 K B -2.7806 Soluble
212 P B -1.6462 Soluble
213 S B -1.9125 Soluble
214 N B -2.6530 Soluble
215 T B -2.1146 Soluble
216 K B -2.6352 Soluble
217 V B -1.6506 Soluble
218 D B -2.2470 Soluble
219 K B -1.9768 Soluble
220 K B -2.5023 Soluble
221 V B 0.0000 Buried
222 E B -2.2013 Soluble
1 D A -2.4174 Soluble
2 I A 0.0000 Buried
3 Q A -2.3193 Soluble
4 M A 0.0000 Buried
5 T A -1.2824 Soluble
6 Q A 0.0000 Buried
7 S A -0.7178 Soluble
8 P A -0.4369 Soluble
9 S A -0.7564 Soluble
10 S A -0.6606 Soluble
11 L A -0.4532 Soluble
12 S A -0.6763 Soluble
13 A A -0.9618 Soluble
14 S A -0.9123 Soluble
15 V A -0.2522 Soluble
16 G A -0.6994 Soluble
17 D A -1.8438 Soluble
18 R A -2.3454 Soluble
19 V A 0.0000 Buried
20 T A -0.6632 Soluble
21 I A 0.0000 Buried
22 T A -0.7638 Soluble
23 C A 0.0000 Buried
24 R A -2.3942 Soluble
25 A A -2.0158 Soluble
26 S A -2.1432 Soluble
27 K A -2.6072 Soluble
28 T A -1.6213 Soluble
29 I A 0.0000 Buried
36 S A -1.2942 Soluble
37 K A -1.9825 Soluble
38 Y A -0.7647 Soluble
39 L A 0.0000 Buried
40 A A 0.0000 Buried
41 W A 0.0000 Buried
42 Y A 0.0000 Buried
43 Q A 0.0000 Buried
44 Q A 0.0000 Buried
45 K A -1.8588 Soluble
46 P A -1.4768 Soluble
47 G A -1.8026 Soluble
48 K A -2.5786 Soluble
49 A A -1.5410 Soluble
50 P A 0.0000 Buried
51 K A -1.3558 Soluble
52 L A 0.0000 Buried
53 L A 0.0000 Buried
54 I A 0.0000 Buried
55 Y A 0.0787 Aggregation-prone
56 S A -0.3693 Soluble
57 G A 0.0000 Buried
65 S A -0.5136 Soluble
66 T A 0.0436 Aggregation-prone
67 L A 0.2113 Aggregation-prone
68 Q A -0.3002 Soluble
69 S A -0.3866 Soluble
70 G A -0.5028 Soluble
71 V A -0.3399 Soluble
72 P A -0.3607 Soluble
74 S A -0.4667 Soluble
75 R A -0.8553 Soluble
76 F A 0.0000 Buried
77 S A -0.4021 Soluble
78 G A -0.2970 Soluble
79 S A -0.9687 Soluble
80 G A -1.4344 Soluble
83 S A -1.6169 Soluble
84 G A -1.5789 Soluble
85 T A -2.0040 Soluble
86 D A -2.5376 Soluble
87 F A 0.0000 Buried
88 T A -0.7582 Soluble
89 L A 0.0000 Buried
90 T A -0.6711 Soluble
91 I A 0.0000 Buried
92 S A -1.3766 Soluble
93 S A -1.1673 Soluble
94 L A 0.0000 Buried
95 Q A -1.1154 Soluble
96 P A -1.8908 Soluble
97 E A -2.4484 Soluble
98 D A 0.0000 Buried
99 F A 0.0000 Buried
100 A A 0.0000 Buried
101 T A -0.7186 Soluble
102 Y A 0.0000 Buried
103 Y A 0.0000 Buried
104 C A 0.0000 Buried
105 Q A 0.0000 Buried
106 Q A 0.0000 Buried
107 H A 0.0000 Buried
108 N A -0.9259 Soluble
109 E A -1.1804 Soluble
114 Y A -0.7499 Soluble
115 P A -1.0154 Soluble
116 L A 0.0000 Buried
117 T A -0.8235 Soluble
118 F A -0.4258 Soluble
119 G A 0.0000 Buried
120 Q A -1.6422 Soluble
121 G A 0.0000 Buried
122 T A 0.0000 Buried
123 K A -1.0931 Soluble
124 V A 0.0000 Buried
125 E A -1.1116 Soluble
126 I A 0.0000 Buried
127 K A -1.1953 Soluble
128 R A -0.8275 Soluble
129 T A -0.0580 Soluble
130 V A 0.3639 Aggregation-prone
131 A A 0.1395 Aggregation-prone
132 A A -0.0994 Soluble
133 P A 0.0000 Buried
134 S A -0.0736 Soluble
135 V A 0.0000 Buried
136 F A 0.1937 Aggregation-prone
137 I A 0.1210 Aggregation-prone
138 F A 0.0000 Buried
139 P A -0.3260 Soluble
140 P A -0.7915 Soluble
141 S A -1.6810 Soluble
142 D A -3.0585 Soluble
143 E A -3.1720 Soluble
144 Q A 0.0000 Buried
145 L A -2.2435 Soluble
146 K A -2.8905 Soluble
147 S A -1.7372 Soluble
148 G A -1.2039 Soluble
149 T A -0.9271 Soluble
150 A A 0.0000 Buried
151 S A 0.0000 Buried
152 V A 0.0000 Buried
153 V A 0.0000 Buried
154 C A 0.0000 Buried
155 L A 0.0000 Buried
156 L A 0.0000 Buried
157 N A 0.0000 Buried
158 N A -0.9325 Soluble
159 F A 0.0000 Buried
160 Y A 0.0000 Buried
161 P A -1.7052 Soluble
162 R A -2.9170 Soluble
163 E A -3.1742 Soluble
164 A A -2.3062 Soluble
165 K A -2.3284 Soluble
166 V A -1.1998 Soluble
167 Q A -0.6542 Soluble
168 W A 0.0000 Buried
169 K A -0.6901 Soluble
170 V A 0.0000 Buried
171 D A -1.6583 Soluble
172 N A -1.4224 Soluble
173 A A -0.4154 Soluble
174 L A 0.4493 Aggregation-prone
175 Q A -0.3327 Soluble
176 S A -0.5318 Soluble
177 G A -0.9327 Soluble
178 N A -0.9531 Soluble
179 S A -1.1419 Soluble
180 Q A -1.3472 Soluble
181 E A -1.8899 Soluble
182 S A -0.9236 Soluble
183 V A -0.8337 Soluble
184 T A -0.8820 Soluble
185 E A -1.8077 Soluble
186 Q A 0.0000 Buried
187 D A -2.0581 Soluble
188 S A -2.4270 Soluble
189 K A -2.8632 Soluble
190 D A -2.3428 Soluble
191 S A 0.0000 Buried
192 T A 0.0000 Buried
193 Y A 0.0000 Buried
194 S A 0.0000 Buried
195 L A 0.0000 Buried
196 S A 0.0000 Buried
197 S A 0.0000 Buried
198 T A -0.6401 Soluble
199 L A 0.0000 Buried
200 T A -0.5128 Soluble
201 L A -0.8296 Soluble
202 S A -1.2449 Soluble
203 K A -2.2856 Soluble
204 A A -2.0514 Soluble
205 D A -2.8600 Soluble
206 Y A 0.0000 Buried
207 E A -3.3881 Soluble
208 K A -3.3978 Soluble
209 H A -2.7016 Soluble
210 K A -2.5438 Soluble
211 V A -1.4741 Soluble
212 Y A 0.0000 Buried
213 A A 0.0000 Buried
214 C A 0.0000 Buried
215 E A -0.9223 Soluble
216 V A 0.0000 Buried
217 T A -1.2355 Soluble
218 H A 0.0000 Buried
219 Q A -1.5540 Soluble
220 G A -0.3979 Soluble
221 L A -0.1859 Soluble
222 S A -0.4279 Soluble
223 S A -0.4041 Soluble
224 P A -0.5399 Soluble
225 V A 0.0075 Aggregation-prone
226 T A -0.4359 Soluble
227 K A -0.6729 Soluble
228 S A -0.4566 Soluble
229 F A 0.0000 Buried
230 N A -1.4910 Soluble
231 R A -2.1015 Soluble
232 G A -1.7835 Soluble
233 E A -2.0755 Soluble
234 C A -0.7570 Soluble

3D Structure — colored by A4D score

Sequence - click residue to focus in viewer  |  colored by A4D score
Load structure to view sequence…
Color Legend (B-factor = A4D Score)
Score > 1.5 — highly aggregation-prone
Score 0.5–1.5 — aggregation-prone
Score ≈ 0 — buried
Score −1 to −0.5 — soluble
Score < −2.5 — highly soluble
pH Structure
Load structure at specific pH condition
A4D Score Threshold
Highlight residues > threshold in the sequence panel
CDR Regions
HCDR1
HCDR2
HCDR3
LCDR1
LCDR2
LCDR3
Display Options

pH-Dependent Aggregation Profiles

A4D scores calculated across 11 pH conditions (4.0–9.0, step 0.5). Click a row to view the structure at that pH. The input structure is globular — max score is recommended for pH analysis.

pH Avg A4D Score Max A4D Score Downloads
4.0 -0.8403 4.8879 CSV PDB
4.5 -0.8858 4.8879 CSV PDB
5.0 -0.9399 4.8879 CSV PDB
5.5 -0.9915 4.8879 CSV PDB
6.0 -1.028 4.8879 CSV PDB
6.5 -1.0388 4.8879 CSV PDB
7.0 -1.0229 4.8879 CSV PDB
7.5 -0.9892 4.8879 CSV PDB
8.0 -0.9458 4.8878 CSV PDB
8.5 -0.8957 4.8873 CSV PDB
9.0 -0.8386 4.886 CSV PDB
Average A4D Score vs pH
Max A4D Score vs pH