Zenocutuzumab / 5o4g

A4DAB306_5o4g_B_A | Source PDB: 5o4g | Chains: B, A | Done
100
Yes
10 Å
Yes
Avg A4D Score
-0.6236
Max Score
2.4634
Min Score
-3.6449
Total Score
-268.14
Score CDR
0.1554
Score non-CDR
-0.7215

Calculation Parameters

Chain Sequence(s) QVQLVQSGAEVKKPGASVKLSCKASGYTFTAYYINWVRQAPGQGLEWIGRIYPGSGYTSYAQKFQGRATLTADESTSTAYMELSSLRSEDTAVYFCARPPVYYDSAWFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDDIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC input.pdb
Selected Chain(s) B (Heavy), A (Light)
Distance of Aggregation 10 Å
FoldX Energy Minimization Yes
pH Calculations Yes
Downloads Download all data (.tar.gz)

Aggrescan4D Profile

Aggregation-prone (score > 0)
Soluble (score < 0)
Buried (score = 0)

Per-Residue A4D Scores

Download CSV
Minimum Score -3.6449
Maximum Score 2.4634
Average Score -0.6236
Total Score -268.138

Residues with A4D score > 0.0 are highlighted as aggregation-prone.

Index Residue Chain A4D Score Classification
1 Q B -1.3545 Soluble
2 V B -0.5746 Soluble
3 Q B -1.0559 Soluble
4 L B 0.0000 Buried
5 V B -0.3111 Soluble
6 Q B 0.0000 Buried
7 S B -0.8576 Soluble
8 G B -1.1522 Soluble
9 A B -0.9865 Soluble
11 E B -1.6750 Soluble
12 V B -1.2822 Soluble
13 K B -1.8222 Soluble
14 K B -2.4200 Soluble
15 P B -1.7651 Soluble
16 G B -1.4824 Soluble
17 A B -1.1762 Soluble
18 S B -1.2661 Soluble
19 V B 0.0000 Buried
20 K B -2.0841 Soluble
21 L B 0.0000 Buried
22 S B -0.6905 Soluble
23 C B 0.0000 Buried
24 K B -0.9827 Soluble
25 A B 0.0000 Buried
26 S B -0.7595 Soluble
27 G B -0.8438 Soluble
28 Y B -0.2288 Soluble
29 T B -0.1988 Soluble
30 F B 0.0000 Buried
35 T B -0.5416 Soluble
36 A B 0.3212 Aggregation-prone
37 Y B 0.8781 Aggregation-prone
38 Y B 0.4326 Aggregation-prone
39 I B 0.0000 Buried
40 N B 0.0000 Buried
41 W B 0.0000 Buried
42 V B 0.0000 Buried
43 R B 0.0000 Buried
44 Q B -0.6406 Soluble
45 A B -0.9793 Soluble
46 P B -0.8300 Soluble
47 G B -1.3297 Soluble
48 Q B -1.8440 Soluble
49 G B -1.3067 Soluble
50 L B 0.0000 Buried
51 E B -0.6161 Soluble
52 W B 0.0000 Buried
53 I B 0.0000 Buried
54 G B 0.0000 Buried
55 R B -0.1443 Soluble
56 I B 0.0000 Buried
57 Y B 0.3688 Aggregation-prone
58 P B 0.0000 Buried
59 G B -0.9595 Soluble
62 S B -0.2499 Soluble
63 G B 0.0262 Aggregation-prone
64 Y B 1.0546 Aggregation-prone
65 T B 0.5368 Aggregation-prone
66 S B 0.0211 Aggregation-prone
67 Y B -0.7118 Soluble
68 A B 0.0000 Buried
69 Q B -2.6053 Soluble
70 K B -2.5818 Soluble
71 F B 0.0000 Buried
72 Q B -2.2193 Soluble
74 G B -1.6288 Soluble
75 R B -1.3275 Soluble
76 A B 0.0000 Buried
77 T B -0.7706 Soluble
78 L B 0.0000 Buried
79 T B -0.2021 Soluble
80 A B -0.8901 Soluble
81 D B -2.0712 Soluble
82 E B -2.5749 Soluble
83 S B -1.4558 Soluble
84 T B -1.2129 Soluble
85 S B -1.3722 Soluble
86 T B 0.0000 Buried
87 A B 0.0000 Buried
88 Y B -0.6553 Soluble
89 M B 0.0000 Buried
90 E B -1.5758 Soluble
91 L B 0.0000 Buried
92 S B -1.0098 Soluble
93 S B -1.0791 Soluble
94 L B 0.0000 Buried
95 R B -2.3618 Soluble
96 S B -1.9914 Soluble
97 E B -2.3470 Soluble
98 D B 0.0000 Buried
99 T B -0.9049 Soluble
100 A B 0.0000 Buried
101 V B 0.1277 Aggregation-prone
102 Y B 0.0000 Buried
103 F B 0.0000 Buried
104 C B 0.0000 Buried
105 A B 0.0000 Buried
106 R B 0.0000 Buried
107 P B 0.0000 Buried
108 P B 1.3621 Aggregation-prone
109 V B 2.4634 Aggregation-prone
110 Y B 2.2353 Aggregation-prone
111 Y B 1.3663 Aggregation-prone
112A D B -0.3304 Soluble
112 S B 0.2780 Aggregation-prone
113 A B 0.1984 Aggregation-prone
114 W B 0.4253 Aggregation-prone
115 F B 0.0000 Buried
116 A B 0.0000 Buried
117 Y B 0.5146 Aggregation-prone
118 W B -0.1883 Soluble
119 G B 0.0000 Buried
120 Q B -1.5184 Soluble
121 G B -0.8599 Soluble
122 T B 0.0000 Buried
123 L B -0.2473 Soluble
124 V B 0.0000 Buried
125 T B 0.0000 Buried
126 V B 0.0000 Buried
127 S B -1.0766 Soluble
128 S B -0.9766 Soluble
129 A B -0.6024 Soluble
130 S B -0.7891 Soluble
131 T B -1.1120 Soluble
132 K B -1.7160 Soluble
133 G B -1.5761 Soluble
134 P B -0.8606 Soluble
135 S B -0.2187 Soluble
136 V B -0.3920 Soluble
137 F B -0.5765 Soluble
138 P B -0.5431 Soluble
139 L B 0.0000 Buried
140 A B -0.0545 Soluble
141 P B -0.4426 Soluble
142 S B -0.8236 Soluble
143 S B -1.0121 Soluble
144 K B -1.9226 Soluble
145 S B 0.0000 Buried
146 T B -0.9174 Soluble
147 S B -0.8732 Soluble
148 G B -0.8236 Soluble
149 G B -0.8034 Soluble
150 T B -0.5457 Soluble
151 A B 0.0000 Buried
152 A B 0.0000 Buried
153 L B 0.0000 Buried
154 G B 0.0000 Buried
155 C B 0.0000 Buried
156 L B 0.0000 Buried
157 V B 0.0000 Buried
158 K B -0.4450 Soluble
159 D B -0.9411 Soluble
160 Y B 0.0000 Buried
161 F B -0.3008 Soluble
162 P B 0.0000 Buried
163 E B -0.4182 Soluble
164 P B -0.4545 Soluble
165 V B -0.1752 Soluble
166 T B -0.3772 Soluble
167 V B -0.0148 Soluble
168 S B -0.3113 Soluble
169 W B 0.0000 Buried
170 N B -1.3383 Soluble
171 S B -0.8838 Soluble
172 G B -0.8925 Soluble
173 A B -0.5722 Soluble
174 L B -0.1436 Soluble
175 T B -0.3177 Soluble
176 S B -0.2253 Soluble
177 G B -0.3193 Soluble
178 V B 0.0788 Aggregation-prone
179 H B -0.3103 Soluble
180 T B -0.0914 Soluble
181 F B 0.0000 Buried
182 P B -0.3634 Soluble
183 A B 0.3007 Aggregation-prone
184 V B 0.4307 Aggregation-prone
185 L B 1.3753 Aggregation-prone
186 Q B 0.1524 Aggregation-prone
187 S B -0.2069 Soluble
188 S B -0.2593 Soluble
189 G B 0.1022 Aggregation-prone
190 L B 0.0170 Aggregation-prone
191 Y B 0.5673 Aggregation-prone
192 S B 0.0000 Buried
193 L B 0.0702 Aggregation-prone
194 S B 0.0000 Buried
195 S B 0.0000 Buried
196 V B 0.0000 Buried
197 V B 0.0000 Buried
198 T B -0.1319 Soluble
199 V B 0.0000 Buried
200 P B -0.4387 Soluble
201 S B -0.5338 Soluble
202 S B -0.6113 Soluble
203 S B -0.5886 Soluble
204 L B -0.4238 Soluble
205 G B -0.7324 Soluble
206 T B -0.8209 Soluble
207 Q B -1.1715 Soluble
208 T B -0.4827 Soluble
209 Y B 0.2069 Aggregation-prone
210 I B 0.1988 Aggregation-prone
211 C B 0.0000 Buried
212 N B -1.0135 Soluble
213 V B 0.0000 Buried
214 N B -1.4554 Soluble
215 H B 0.0000 Buried
216 K B -2.1010 Soluble
217 P B -1.6931 Soluble
218 S B -1.8324 Soluble
219 N B -2.3097 Soluble
220 T B -1.9276 Soluble
221 K B -2.2335 Soluble
222 V B -0.8202 Soluble
223 D B -1.6415 Soluble
1 D A -2.3375 Soluble
2 I A -1.5300 Soluble
3 Q A -2.1006 Soluble
4 M A 0.0000 Buried
5 T A -1.1733 Soluble
6 Q A 0.0000 Buried
7 S A -0.5046 Soluble
8 P A -0.4268 Soluble
9 S A -0.8030 Soluble
10 S A -0.7532 Soluble
11 L A -0.4304 Soluble
12 S A -0.6572 Soluble
13 A A -1.0499 Soluble
14 S A -1.1422 Soluble
15 V A -0.5894 Soluble
16 G A -1.0703 Soluble
17 D A -2.1793 Soluble
18 R A -2.5331 Soluble
19 V A 0.0000 Buried
20 T A -0.4967 Soluble
21 I A 0.0000 Buried
22 T A -0.6953 Soluble
23 C A 0.0000 Buried
24 R A -2.2188 Soluble
25 A A -1.7766 Soluble
26 S A -1.8143 Soluble
27 Q A -1.9833 Soluble
28 S A -1.0656 Soluble
29 I A 0.0000 Buried
36 S A -0.1493 Soluble
37 S A -0.0441 Soluble
38 Y A 0.8053 Aggregation-prone
39 L A 0.0000 Buried
40 N A 0.0000 Buried
41 W A 0.0000 Buried
42 Y A 0.0000 Buried
43 Q A 0.0000 Buried
44 Q A 0.0000 Buried
45 K A -1.7862 Soluble
46 P A -1.3868 Soluble
47 G A -1.7526 Soluble
48 K A -2.4774 Soluble
49 A A -1.4265 Soluble
50 P A 0.0000 Buried
51 K A -1.1506 Soluble
52 L A 0.0000 Buried
53 L A 0.0000 Buried
54 I A 0.0000 Buried
55 Y A 0.4415 Aggregation-prone
56 A A 0.3134 Aggregation-prone
57 A A 0.0000 Buried
65 S A -0.1858 Soluble
66 S A 0.0397 Aggregation-prone
67 L A 0.2859 Aggregation-prone
68 Q A -0.2330 Soluble
69 S A -0.4355 Soluble
70 G A -0.5887 Soluble
71 V A 0.0000 Buried
72 P A -0.4437 Soluble
74 S A -0.5050 Soluble
75 R A -0.8673 Soluble
76 F A 0.0000 Buried
77 S A -0.3511 Soluble
78 G A -0.2390 Soluble
79 S A -0.6523 Soluble
80 G A -0.9679 Soluble
83 S A -0.8991 Soluble
84 G A -1.0918 Soluble
85 T A -1.5903 Soluble
86 D A -2.0436 Soluble
87 F A 0.0000 Buried
88 T A -0.6653 Soluble
89 L A 0.0000 Buried
90 T A -0.6520 Soluble
91 I A 0.0000 Buried
92 S A -1.3710 Soluble
93 S A -1.2339 Soluble
94 L A 0.0000 Buried
95 Q A -1.4962 Soluble
96 P A -1.8281 Soluble
97 E A -2.3069 Soluble
98 D A 0.0000 Buried
99 F A 0.0000 Buried
100 A A 0.0000 Buried
101 T A -0.9469 Soluble
102 Y A 0.0000 Buried
103 Y A 0.0000 Buried
104 C A 0.0000 Buried
105 Q A 0.0000 Buried
106 Q A 0.0000 Buried
107 S A 0.6917 Aggregation-prone
108 Y A 0.9164 Aggregation-prone
109 S A 0.0559 Aggregation-prone
114 T A -0.3780 Soluble
115 P A 0.0000 Buried
116 P A 0.0000 Buried
117 T A -0.6264 Soluble
118 F A 0.0000 Buried
119 G A 0.0000 Buried
120 Q A -1.5626 Soluble
121 G A 0.0000 Buried
122 T A 0.0000 Buried
123 K A -1.6500 Soluble
124 V A 0.0000 Buried
125 E A -1.1562 Soluble
126 I A 0.0000 Buried
127 K A -1.3244 Soluble
128 R A -0.8077 Soluble
129 T A 0.1714 Aggregation-prone
130 V A 1.1960 Aggregation-prone
131 A A 0.2565 Aggregation-prone
132 A A 0.1063 Aggregation-prone
133 P A 0.0000 Buried
134 S A -0.0851 Soluble
135 V A 0.0000 Buried
136 F A -0.3003 Soluble
137 I A 0.0000 Buried
138 F A 0.0000 Buried
139 P A -0.7509 Soluble
140 P A -0.7856 Soluble
141 S A -1.6687 Soluble
142 D A -3.0078 Soluble
143 E A -3.1652 Soluble
144 Q A 0.0000 Buried
145 L A -2.2735 Soluble
146 K A -2.7889 Soluble
147 S A -1.8219 Soluble
148 G A -1.2011 Soluble
149 T A -0.8031 Soluble
150 A A 0.0000 Buried
151 S A -0.0261 Soluble
152 V A 0.0000 Buried
153 V A 0.0000 Buried
154 C A 0.0000 Buried
155 L A 0.0000 Buried
156 L A 0.0000 Buried
157 N A 0.0000 Buried
158 N A -0.8500 Soluble
159 F A 0.0000 Buried
160 Y A 0.0000 Buried
161 P A -1.6734 Soluble
162 R A -3.2045 Soluble
163 E A -3.2946 Soluble
164 A A -2.4140 Soluble
165 K A -2.5649 Soluble
166 V A -1.2509 Soluble
167 Q A -0.9914 Soluble
168 W A 0.0000 Buried
169 K A -0.9921 Soluble
170 V A 0.0000 Buried
171 D A -1.6022 Soluble
172 N A -1.5465 Soluble
173 A A -0.7435 Soluble
174 L A -0.1403 Soluble
175 Q A -0.5306 Soluble
176 S A -0.6995 Soluble
177 G A -0.8452 Soluble
178 N A -0.8228 Soluble
179 S A -1.2786 Soluble
180 Q A -1.6026 Soluble
181 E A -2.1933 Soluble
182 S A 0.0000 Buried
183 V A -0.6670 Soluble
184 T A 0.0000 Buried
185 E A -1.7201 Soluble
186 Q A 0.0000 Buried
187 D A -1.7870 Soluble
188 S A -2.1690 Soluble
189 K A -2.5437 Soluble
190 D A -1.8153 Soluble
191 S A 0.0000 Buried
192 T A 0.0000 Buried
193 Y A 0.0000 Buried
194 S A 0.0000 Buried
195 L A 0.0000 Buried
196 S A 0.0000 Buried
197 S A 0.0000 Buried
198 T A -0.6970 Soluble
199 L A 0.0000 Buried
200 T A -0.2682 Soluble
201 L A -0.2384 Soluble
202 S A -0.8994 Soluble
203 K A -1.8489 Soluble
204 A A -1.6718 Soluble
205 D A -2.5308 Soluble
206 Y A 0.0000 Buried
207 E A -3.6449 Soluble
208 K A -3.4907 Soluble
209 H A -2.9671 Soluble
210 K A -3.1845 Soluble
211 V A -1.5789 Soluble
212 Y A 0.0000 Buried
213 A A 0.0000 Buried
214 C A 0.0000 Buried
215 E A -0.8497 Soluble
216 V A 0.0000 Buried
217 T A -1.2408 Soluble
218 H A 0.0000 Buried
219 Q A -1.4955 Soluble
220 G A -0.2439 Soluble
221 L A -0.2067 Soluble
222 S A -0.4636 Soluble
223 S A -0.4575 Soluble
224 P A -0.6128 Soluble
225 V A -0.0685 Soluble
226 T A -0.5458 Soluble
227 K A -1.1051 Soluble
228 S A -0.8710 Soluble
229 F A 0.0000 Buried
230 N A -1.9269 Soluble
231 R A -2.3376 Soluble
232 G A -1.8722 Soluble
233 E A -2.2219 Soluble
234 C A -0.6737 Soluble

3D Structure — colored by A4D score

Sequence - click residue to focus in viewer  |  colored by A4D score
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Color Legend (B-factor = A4D Score)
Score > 1.5 — highly aggregation-prone
Score 0.5–1.5 — aggregation-prone
Score ≈ 0 — buried
Score −1 to −0.5 — soluble
Score < −2.5 — highly soluble
pH Structure
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A4D Score Threshold
Highlight residues > threshold in the sequence panel
CDR Regions
HCDR1
HCDR2
HCDR3
LCDR1
LCDR2
LCDR3
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pH-Dependent Aggregation Profiles

A4D scores calculated across 11 pH conditions (4.0–9.0, step 0.5). Click a row to view the structure at that pH. The input structure is globular — max score is recommended for pH analysis.

pH Avg A4D Score Max A4D Score Downloads
4.0 -0.6558 2.7129 CSV PDB
4.5 -0.6967 2.6236 CSV PDB
5.0 -0.7456 2.5264 CSV PDB
5.5 -0.7928 2.4372 CSV PDB
6.0 -0.8277 2.3942 CSV PDB
6.5 -0.8411 2.3512 CSV PDB
7.0 -0.8316 2.3085 CSV PDB
7.5 -0.8064 2.2667 CSV PDB
8.0 -0.7729 2.2275 CSV PDB
8.5 -0.7337 2.1946 CSV PDB
9.0 -0.6887 2.1714 CSV PDB
Average A4D Score vs pH
Max A4D Score vs pH