Ficerafusp / 5iop

A4DAB117_5iop_B_A | Source PDB: 5iop | Chains: B, A | Done
100
Yes
10 Å
Yes
Avg A4D Score
-0.7003
Max Score
1.98
Min Score
-3.7752
Total Score
-299.73
Score CDR
-0.3463
Score non-CDR
-0.7429

Calculation Parameters

Chain Sequence(s) QVQLKQSGPGLVQPSQSLSITCTVSGFSLTNYGVHWVRQSPGKGLEWLGVIWSGGNTDYNTPFTSRLSINKDNSKSQVFFKMNSLQSNDTAIYYCARALTYYDYEFAYWGQGTLVTVSAASTKGPSVFPLAPSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKDILLTQSPVILSVSPGERVSFSCRASQSIGTNIHWYQQRTNGSPRLLIKYASESISGIPSRFSGSGSGTDFTLSINSVESEDIADYYCQQNNNWPTTFGAGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGA input.pdb
Selected Chain(s) B (Heavy), A (Light)
Distance of Aggregation 10 Å
FoldX Energy Minimization Yes
pH Calculations Yes
Downloads Download all data (.tar.gz)

Aggrescan4D Profile

Aggregation-prone (score > 0)
Soluble (score < 0)
Buried (score = 0)

Per-Residue A4D Scores

Download CSV
Minimum Score -3.7752
Maximum Score 1.98
Average Score -0.7003
Total Score -299.7318

Residues with A4D score > 0.0 are highlighted as aggregation-prone.

Index Residue Chain A4D Score Classification
1 Q B -1.5392 Soluble
2 V B -1.0499 Soluble
3 Q B -1.8088 Soluble
4 L B 0.0000 Buried
5 K B -1.9455 Soluble
6 Q B 0.0000 Buried
7 S B -0.7788 Soluble
8 G B -1.0279 Soluble
9 P B -0.3739 Soluble
11 G B -0.3175 Soluble
12 L B 0.0496 Aggregation-prone
13 V B -0.6571 Soluble
14 Q B -1.3469 Soluble
15 P B -1.4631 Soluble
16 S B -1.5409 Soluble
17 Q B -1.9387 Soluble
18 S B -1.5615 Soluble
19 L B 0.0000 Buried
20 S B -0.6124 Soluble
21 I B 0.0000 Buried
22 T B -0.4822 Soluble
23 C B 0.0000 Buried
24 T B -1.0593 Soluble
25 V B 0.0000 Buried
26 S B -1.2492 Soluble
27 G B -1.0576 Soluble
28 F B -0.5631 Soluble
29 S B -0.8671 Soluble
30 L B 0.0000 Buried
35 T B -0.8866 Soluble
36 N B -0.8513 Soluble
37 Y B 0.4313 Aggregation-prone
38 G B 0.0000 Buried
39 V B 0.0000 Buried
40 H B 0.0000 Buried
41 W B 0.0000 Buried
42 V B 0.0000 Buried
43 R B 0.0000 Buried
44 Q B -0.4458 Soluble
45 S B -1.0062 Soluble
46 P B -1.2073 Soluble
47 G B -1.7873 Soluble
48 K B -2.2546 Soluble
49 G B -1.1413 Soluble
50 L B 0.0000 Buried
51 E B 0.0000 Buried
52 W B 0.0000 Buried
53 L B 0.0000 Buried
54 G B 0.0000 Buried
55 V B 0.0000 Buried
56 I B 0.0000 Buried
57 W B -0.4739 Soluble
58 S B -0.6163 Soluble
59 G B -1.2080 Soluble
63 G B -1.5022 Soluble
64 N B -1.8424 Soluble
65 T B -1.3024 Soluble
66 D B -1.0235 Soluble
67 Y B -0.3639 Soluble
68 N B 0.0000 Buried
69 T B -0.1876 Soluble
70 P B -0.3567 Soluble
71 F B 0.0000 Buried
72 T B -0.4495 Soluble
74 S B -0.5548 Soluble
75 R B -0.9601 Soluble
76 L B 0.0000 Buried
77 S B -1.0061 Soluble
78 I B 0.0000 Buried
79 N B -1.7117 Soluble
80 K B -1.4175 Soluble
81 D B -1.7480 Soluble
82 N B -2.1729 Soluble
83 S B -1.6590 Soluble
84 K B -2.3503 Soluble
85 S B -1.5896 Soluble
86 Q B -1.4806 Soluble
87 V B 0.0000 Buried
88 F B -0.3249 Soluble
89 F B 0.0000 Buried
90 K B -1.4085 Soluble
91 M B 0.0000 Buried
92 N B -1.6560 Soluble
93 S B -1.5062 Soluble
94 L B 0.0000 Buried
95 Q B -2.1993 Soluble
96 S B -1.5526 Soluble
97 N B -2.1173 Soluble
98 D B 0.0000 Buried
99 T B -0.6283 Soluble
100 A B 0.0000 Buried
101 I B 0.5123 Aggregation-prone
102 Y B 0.0000 Buried
103 Y B 0.0000 Buried
104 C B 0.0000 Buried
105 A B 0.0000 Buried
106 R B 0.0000 Buried
107 A B 0.0000 Buried
108 L B 1.0083 Aggregation-prone
109 T B 1.1649 Aggregation-prone
110 Y B 1.8780 Aggregation-prone
111 Y B 1.9800 Aggregation-prone
112 D B 0.0000 Buried
113 Y B 0.5962 Aggregation-prone
114 E B 0.0000 Buried
115 F B 0.0000 Buried
116 A B 0.1921 Aggregation-prone
117 Y B 0.0210 Aggregation-prone
118 W B -0.5234 Soluble
119 G B 0.0000 Buried
120 Q B -1.7464 Soluble
121 G B -0.8264 Soluble
122 T B 0.0000 Buried
123 L B 0.2380 Aggregation-prone
124 V B 0.0000 Buried
125 T B -0.2657 Soluble
126 V B 0.0000 Buried
127 S B -0.4920 Soluble
128 A B -0.2704 Soluble
129 A B -0.2600 Soluble
130 S B -0.4894 Soluble
131 T B -0.6079 Soluble
132 K B -1.2847 Soluble
133 G B -1.2425 Soluble
134 P B 0.0000 Buried
135 S B -0.4593 Soluble
136 V B 0.0000 Buried
137 F B 0.0000 Buried
138 P B -1.3742 Soluble
139 L B 0.0000 Buried
140 A B -1.2596 Soluble
141 P B 0.0000 Buried
142 S B -0.7821 Soluble
143 G B -0.7629 Soluble
144 G B -0.8844 Soluble
145 T B -0.6326 Soluble
146 A B -0.3425 Soluble
147 A B 0.0000 Buried
148 L B 0.0000 Buried
149 G B 0.0000 Buried
150 C B 0.0000 Buried
151 L B 0.0000 Buried
152 V B 0.0000 Buried
153 K B 0.0000 Buried
154 D B -0.4366 Soluble
155 Y B 0.0000 Buried
156 F B 0.0000 Buried
157 P B 0.0000 Buried
158 E B -0.2091 Soluble
159 P B -0.4091 Soluble
160 V B -0.3668 Soluble
161 T B -0.3710 Soluble
162 V B -0.1652 Soluble
163 S B -0.3677 Soluble
164 W B 0.0000 Buried
165 N B -0.7275 Soluble
166 S B -0.6689 Soluble
167 G B -0.5846 Soluble
168 A B -0.2440 Soluble
169 L B -0.0056 Soluble
170 T B -0.1735 Soluble
171 S B -0.1861 Soluble
172 G B -0.2108 Soluble
173 V B 0.1461 Aggregation-prone
174 H B -0.3133 Soluble
175 T B 0.0139 Aggregation-prone
176 F B 0.0000 Buried
177 P B -0.3367 Soluble
178 A B 0.2664 Aggregation-prone
179 V B 0.5625 Aggregation-prone
180 L B 1.1153 Aggregation-prone
181 Q B 0.2588 Aggregation-prone
182 S B -0.0872 Soluble
183 S B -0.2377 Soluble
184 G B 0.0100 Aggregation-prone
185 L B 0.1411 Aggregation-prone
186 Y B 0.4722 Aggregation-prone
187 S B 0.0000 Buried
188 L B 0.0000 Buried
189 S B 0.0000 Buried
190 S B 0.0000 Buried
191 V B 0.0000 Buried
192 V B 0.0000 Buried
193 T B -0.1348 Soluble
194 V B 0.0000 Buried
195 P B -0.5665 Soluble
196 S B -0.6244 Soluble
197 S B -0.6537 Soluble
198 S B -0.7110 Soluble
199 L B -0.8789 Soluble
200 G B -1.0147 Soluble
201 T B -0.8159 Soluble
202 Q B -1.3489 Soluble
203 T B -1.1828 Soluble
204 Y B 0.0000 Buried
205 I B -1.2266 Soluble
206 C B 0.0000 Buried
207 N B -1.4673 Soluble
208 V B 0.0000 Buried
209 N B -1.6167 Soluble
210 H B 0.0000 Buried
211 K B -2.0948 Soluble
212 P B -1.2592 Soluble
213 S B -1.6000 Soluble
214 N B -2.2969 Soluble
215 T B -1.8232 Soluble
216 K B -2.5147 Soluble
217 V B -1.6294 Soluble
218 D B -2.4756 Soluble
219 K B -2.1330 Soluble
220 R B -2.6086 Soluble
221 V B 0.0000 Buried
222 E B -2.8992 Soluble
223 P B -1.9208 Soluble
224 K B -2.4821 Soluble
1 D A -1.5010 Soluble
2 I A 0.0000 Buried
3 L A 0.6137 Aggregation-prone
4 L A 0.0000 Buried
5 T A -0.2900 Soluble
6 Q A -0.0033 Soluble
7 S A 0.1517 Aggregation-prone
8 P A 0.7662 Aggregation-prone
9 V A 1.7702 Aggregation-prone
10 I A 1.1568 Aggregation-prone
11 L A 0.3843 Aggregation-prone
12 S A -0.5090 Soluble
13 V A -1.3313 Soluble
14 S A -1.8167 Soluble
15 P A -1.9187 Soluble
16 G A -2.1664 Soluble
17 E A -2.9621 Soluble
18 R A -3.2633 Soluble
19 V A 0.0000 Buried
20 S A -0.7551 Soluble
21 F A 0.0000 Buried
22 S A -0.7001 Soluble
23 C A 0.0000 Buried
24 R A -2.2272 Soluble
25 A A -1.2841 Soluble
26 S A -1.0860 Soluble
27 Q A -1.8691 Soluble
28 S A -1.6808 Soluble
29 I A 0.0000 Buried
36 G A -1.0761 Soluble
37 T A -0.8292 Soluble
38 N A -0.8687 Soluble
39 I A 0.0000 Buried
40 H A 0.0000 Buried
41 W A 0.0000 Buried
42 Y A 0.0000 Buried
43 Q A 0.0000 Buried
44 Q A -1.2288 Soluble
45 R A -1.7701 Soluble
46 T A -1.6478 Soluble
47 N A -1.8008 Soluble
48 G A -1.5042 Soluble
49 S A -0.9891 Soluble
50 P A 0.0000 Buried
51 R A -0.7236 Soluble
52 L A 0.0000 Buried
53 L A 0.0000 Buried
54 I A 0.0000 Buried
55 K A -0.8304 Soluble
56 Y A -0.6540 Soluble
57 A A 0.0000 Buried
65 S A -1.3267 Soluble
66 E A -2.0540 Soluble
67 S A -1.2222 Soluble
68 I A -0.5556 Soluble
69 S A -0.3401 Soluble
70 G A -0.4723 Soluble
71 I A -0.2451 Soluble
72 P A -0.3116 Soluble
74 S A -0.5405 Soluble
75 R A -1.0413 Soluble
76 F A 0.0000 Buried
77 S A -0.8756 Soluble
78 G A -0.7762 Soluble
79 S A -0.9250 Soluble
80 G A -1.1666 Soluble
83 S A -1.1890 Soluble
84 G A -1.4105 Soluble
85 T A -2.0056 Soluble
86 D A -2.7392 Soluble
87 F A 0.0000 Buried
88 T A -0.9041 Soluble
89 L A 0.0000 Buried
90 S A -0.8987 Soluble
91 I A 0.0000 Buried
92 N A -2.4627 Soluble
93 S A -2.2961 Soluble
94 V A 0.0000 Buried
95 E A -2.3862 Soluble
96 S A -2.0693 Soluble
97 E A -1.7372 Soluble
98 D A 0.0000 Buried
99 I A -1.4835 Soluble
100 A A -1.2880 Soluble
101 D A -0.7762 Soluble
102 Y A 0.0000 Buried
103 Y A 0.0000 Buried
104 C A 0.0000 Buried
105 Q A 0.0000 Buried
106 Q A 0.0000 Buried
107 N A -0.7298 Soluble
108 N A -1.3905 Soluble
109 N A -1.3372 Soluble
114 W A 0.0287 Aggregation-prone
115 P A -0.2495 Soluble
116 T A 0.0000 Buried
117 T A -0.0493 Soluble
118 F A 0.1990 Aggregation-prone
119 G A 0.0000 Buried
120 A A 0.0102 Aggregation-prone
121 G A 0.0000 Buried
122 T A 0.0000 Buried
123 K A -0.8536 Soluble
124 L A 0.0000 Buried
125 E A -1.3633 Soluble
126 L A 0.0000 Buried
127 K A -1.6781 Soluble
128 R A -1.2173 Soluble
129 T A -0.1025 Soluble
130 V A 0.4104 Aggregation-prone
131 A A 0.2134 Aggregation-prone
132 A A -0.0420 Soluble
133 P A 0.0000 Buried
134 S A -0.1529 Soluble
135 V A 0.0000 Buried
136 F A 0.1159 Aggregation-prone
137 I A 0.1108 Aggregation-prone
138 F A 0.0000 Buried
139 P A -0.4401 Soluble
140 P A 0.0000 Buried
141 S A -1.9214 Soluble
142 D A -3.1888 Soluble
143 E A -3.1504 Soluble
144 Q A 0.0000 Buried
145 L A -2.3947 Soluble
146 K A -2.8749 Soluble
147 S A -1.7904 Soluble
148 G A -1.2873 Soluble
149 T A -1.0582 Soluble
150 A A 0.0000 Buried
151 S A 0.0000 Buried
152 V A 0.0000 Buried
153 V A 0.0000 Buried
154 C A 0.0000 Buried
155 L A 0.0000 Buried
156 L A 0.0000 Buried
157 N A 0.0000 Buried
158 N A -0.8618 Soluble
159 F A 0.0000 Buried
160 Y A -1.0799 Soluble
161 P A -1.6735 Soluble
162 R A -2.8720 Soluble
163 E A -3.1650 Soluble
164 A A -2.1824 Soluble
165 K A -1.9508 Soluble
166 V A -1.0463 Soluble
167 Q A -0.9580 Soluble
168 W A 0.0000 Buried
169 K A -1.1586 Soluble
170 V A 0.0000 Buried
171 D A -2.1617 Soluble
172 N A -1.7922 Soluble
173 A A -0.6341 Soluble
174 L A 0.0941 Aggregation-prone
175 Q A -0.7127 Soluble
176 S A -0.8536 Soluble
177 G A -1.3556 Soluble
178 N A -1.7426 Soluble
179 S A -1.4766 Soluble
180 Q A -1.4180 Soluble
181 E A -1.5770 Soluble
182 S A -0.8849 Soluble
183 V A -0.8617 Soluble
184 T A -1.2030 Soluble
185 E A -2.2997 Soluble
186 Q A 0.0000 Buried
187 D A -1.8754 Soluble
188 S A -2.1004 Soluble
189 K A -2.5325 Soluble
190 D A -1.8932 Soluble
191 S A 0.0000 Buried
192 T A 0.0000 Buried
193 Y A 0.0000 Buried
194 S A 0.0000 Buried
195 L A 0.0000 Buried
196 S A 0.0000 Buried
197 S A 0.0000 Buried
198 T A -0.7034 Soluble
199 L A 0.0000 Buried
200 T A -0.5653 Soluble
201 L A -0.8686 Soluble
202 S A -1.1276 Soluble
203 K A -2.1863 Soluble
204 A A -2.0222 Soluble
205 D A -2.7122 Soluble
206 Y A 0.0000 Buried
207 E A -3.7574 Soluble
208 K A -3.7752 Soluble
209 H A -3.0739 Soluble
210 K A -2.9966 Soluble
211 V A -1.2660 Soluble
212 Y A 0.0000 Buried
213 A A -0.9808 Soluble
214 C A 0.0000 Buried
215 E A -1.3113 Soluble
216 V A 0.0000 Buried
217 T A -1.2283 Soluble
218 H A 0.0000 Buried
219 Q A -1.5154 Soluble
220 G A -0.3352 Soluble
221 L A -0.1388 Soluble
222 S A -0.4112 Soluble
223 S A -0.4030 Soluble
224 P A -0.5888 Soluble
225 V A -0.2058 Soluble
226 T A -0.6468 Soluble
227 K A -0.7968 Soluble
228 S A -0.5446 Soluble
229 F A -0.4871 Soluble
230 N A -1.2539 Soluble
231 R A -1.9250 Soluble
232 G A -1.2505 Soluble
233 A A -0.5771 Soluble

3D Structure — colored by A4D score

Sequence - click residue to focus in viewer  |  colored by A4D score
Load structure to view sequence…
Color Legend (B-factor = A4D Score)
Score > 1.5 — highly aggregation-prone
Score 0.5–1.5 — aggregation-prone
Score ≈ 0 — buried
Score −1 to −0.5 — soluble
Score < −2.5 — highly soluble
pH Structure
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A4D Score Threshold
Highlight residues > threshold in the sequence panel
CDR Regions
HCDR1
HCDR2
HCDR3
LCDR1
LCDR2
LCDR3
Display Options

pH-Dependent Aggregation Profiles

A4D scores calculated across 11 pH conditions (4.0–9.0, step 0.5). Click a row to view the structure at that pH. The input structure is globular — max score is recommended for pH analysis.

pH Avg A4D Score Max A4D Score Downloads
4.0 -0.6932 2.7927 CSV PDB
4.5 -0.7315 2.7342 CSV PDB
5.0 -0.7778 2.6603 CSV PDB
5.5 -0.8229 2.5794 CSV PDB
6.0 -0.8563 2.4961 CSV PDB
6.5 -0.8688 2.4119 CSV PDB
7.0 -0.8597 2.3278 CSV PDB
7.5 -0.836 2.2441 CSV PDB
8.0 -0.8044 2.2372 CSV PDB
8.5 -0.7676 2.3482 CSV PDB
9.0 -0.7257 2.4609 CSV PDB
Average A4D Score vs pH
Max A4D Score vs pH