Carlumab / 4dn4

A4DAB058_4dn4_H_L | Source PDB: 4dn4 | Chains: H, L | Done
99.56
Yes
10 Å
Yes
Avg A4D Score
-0.6735
Max Score
2.6492
Min Score
-3.6231
Total Score
-287.58
Score CDR
-0.0222
Score non-CDR
-0.756

Calculation Parameters

Chain Sequence(s) VELVQSGAEVKKPGSSVKVSCKASGGTFSSYGISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARYDGIYGELDFWGQGTLVTVSSASTKGPSVFPLAPSSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKEIVLTQSPATLSLSPGERATLSCRASQSVSDAYLAWYQQKPGQAPRLLIYDASSRATGVPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYIQLHSFTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR input.pdb
Selected Chain(s) H (Heavy), L (Light)
Distance of Aggregation 10 Å
FoldX Energy Minimization Yes
pH Calculations Yes
Downloads Download all data (.tar.gz)

Aggrescan4D Profile

Aggregation-prone (score > 0)
Soluble (score < 0)
Buried (score = 0)

Per-Residue A4D Scores

Download CSV
Minimum Score -3.6231
Maximum Score 2.6492
Average Score -0.6735
Total Score -287.5806

Residues with A4D score > 0.0 are highlighted as aggregation-prone.

Index Residue Chain A4D Score Classification
2 V H 1.0183 Aggregation-prone
3 E H -1.0089 Soluble
4 L H 0.0000 Buried
5 V H -0.1678 Soluble
6 Q H 0.0000 Buried
7 S H -0.6892 Soluble
8 G H -0.6002 Soluble
9 A H -0.3361 Soluble
11 E H -0.7481 Soluble
12 V H -0.4250 Soluble
13 K H -1.5394 Soluble
14 K H -2.4490 Soluble
15 P H -2.1345 Soluble
16 G H -1.7166 Soluble
17 S H -1.3167 Soluble
18 S H -1.4144 Soluble
19 V H 0.0000 Buried
20 K H -2.0334 Soluble
21 V H 0.0000 Buried
22 S H -0.6691 Soluble
23 C H 0.0000 Buried
24 K H -1.7599 Soluble
25 A H -1.0275 Soluble
26 S H -0.7994 Soluble
27 G H -0.9726 Soluble
28 G H -1.5753 Soluble
29 T H -0.6169 Soluble
30 F H 0.0000 Buried
35 S H 0.0717 Aggregation-prone
36 S H 0.1501 Aggregation-prone
37 Y H 0.3816 Aggregation-prone
38 G H 0.0000 Buried
39 I H 0.0000 Buried
40 S H 0.0000 Buried
41 W H 0.0000 Buried
42 V H 0.0000 Buried
43 R H 0.0000 Buried
44 Q H -0.6062 Soluble
45 A H -1.0367 Soluble
46 P H -1.0855 Soluble
47 G H -1.2771 Soluble
48 Q H -1.8418 Soluble
49 G H -1.2966 Soluble
50 L H 0.0000 Buried
51 E H -0.9806 Soluble
52 W H 0.0000 Buried
53 M H 0.0000 Buried
54 G H 0.0000 Buried
55 G H 0.0000 Buried
56 I H 0.0000 Buried
57 I H 0.0000 Buried
58 P H 0.0000 Buried
59 I H 2.5165 Aggregation-prone
62 F H 2.6492 Aggregation-prone
63 G H 0.7857 Aggregation-prone
64 T H 0.5527 Aggregation-prone
65 A H -0.0231 Soluble
66 N H -0.7650 Soluble
67 Y H -1.1539 Soluble
68 A H -1.8658 Soluble
69 Q H -2.8068 Soluble
70 K H -2.7662 Soluble
71 F H 0.0000 Buried
72 Q H -2.4916 Soluble
74 G H -1.7015 Soluble
75 R H -1.5153 Soluble
76 V H 0.0000 Buried
77 T H -0.7658 Soluble
78 I H 0.0000 Buried
79 T H -0.2900 Soluble
80 A H -0.8405 Soluble
81 D H -2.0439 Soluble
82 E H -2.2919 Soluble
83 S H -1.4794 Soluble
84 T H -1.4413 Soluble
85 S H -1.8125 Soluble
86 T H 0.0000 Buried
87 A H 0.0000 Buried
88 Y H -0.5355 Soluble
89 M H 0.0000 Buried
90 E H -1.4316 Soluble
91 L H 0.0000 Buried
92 S H -1.2012 Soluble
93 S H -1.2964 Soluble
94 L H 0.0000 Buried
95 R H -3.1211 Soluble
96 S H -2.3850 Soluble
97 E H -2.5555 Soluble
98 D H 0.0000 Buried
99 T H -0.9824 Soluble
100 A H 0.0000 Buried
101 V H 0.2645 Aggregation-prone
102 Y H 0.0000 Buried
103 Y H 0.0000 Buried
104 C H 0.0000 Buried
105 A H 0.0000 Buried
106 R H 0.0226 Aggregation-prone
107 Y H 0.0000 Buried
108 D H 0.1794 Aggregation-prone
109 G H 0.7313 Aggregation-prone
110 I H 2.1112 Aggregation-prone
112 Y H 1.2123 Aggregation-prone
113 G H 0.0000 Buried
114 E H 0.2017 Aggregation-prone
115 L H 0.0000 Buried
116 D H -0.0718 Soluble
117 F H 0.5132 Aggregation-prone
118 W H -0.0148 Soluble
119 G H 0.0000 Buried
120 Q H -1.2245 Soluble
121 G H -0.5186 Soluble
122 T H 0.0000 Buried
123 L H 0.0555 Aggregation-prone
124 V H 0.0000 Buried
125 T H 0.0000 Buried
126 V H 0.0000 Buried
127 S H -1.4335 Soluble
128 S H -0.9947 Soluble
129 A H -0.6413 Soluble
130 S H -0.6813 Soluble
131 T H -0.6737 Soluble
132 K H -1.0837 Soluble
133 G H -1.3293 Soluble
134 P H 0.0000 Buried
135 S H -0.2605 Soluble
136 V H 0.0000 Buried
137 F H 0.0000 Buried
138 P H -1.2443 Soluble
139 L H 0.0000 Buried
140 A H -1.4004 Soluble
141 P H 0.0000 Buried
142 S H -0.7581 Soluble
143 S H -0.3432 Soluble
144 G H -0.6307 Soluble
145 T H -0.4825 Soluble
146 A H 0.0000 Buried
147 A H 0.0000 Buried
148 L H 0.0000 Buried
149 G H 0.0000 Buried
150 C H 0.0000 Buried
151 L H 0.0000 Buried
152 V H 0.0000 Buried
153 K H 0.0000 Buried
154 D H -0.3103 Soluble
155 Y H 0.0000 Buried
156 F H 0.0000 Buried
157 P H 0.0000 Buried
158 E H -0.5286 Soluble
159 P H -0.8015 Soluble
160 V H -0.7287 Soluble
161 T H -0.5483 Soluble
162 V H -0.2232 Soluble
163 S H -0.2774 Soluble
164 W H 0.0000 Buried
165 N H -0.7056 Soluble
166 S H -0.5629 Soluble
167 G H -0.4629 Soluble
168 A H -0.2089 Soluble
169 L H -0.0079 Soluble
170 T H -0.1686 Soluble
171 S H -0.1918 Soluble
172 G H -0.2145 Soluble
173 V H 0.1665 Aggregation-prone
174 H H -0.3095 Soluble
175 T H -0.1784 Soluble
176 F H 0.0000 Buried
177 P H -0.3041 Soluble
178 A H 0.2531 Aggregation-prone
179 V H 0.7399 Aggregation-prone
180 L H 1.4178 Aggregation-prone
181 Q H 0.4420 Aggregation-prone
182 S H 0.0063 Aggregation-prone
183 S H -0.1692 Soluble
184 G H 0.0941 Aggregation-prone
185 L H 0.1644 Aggregation-prone
186 Y H 0.0000 Buried
187 S H 0.0000 Buried
188 L H 0.0000 Buried
189 S H 0.0000 Buried
190 S H 0.0000 Buried
191 V H 0.0000 Buried
192 V H 0.0000 Buried
193 T H -0.1357 Soluble
194 V H 0.0000 Buried
195 P H -0.4888 Soluble
196 S H -0.5327 Soluble
197 S H -0.6013 Soluble
198 S H -0.5999 Soluble
199 L H -0.8467 Soluble
200 G H -1.0259 Soluble
201 T H -0.7470 Soluble
202 Q H -1.2566 Soluble
203 T H -1.2469 Soluble
204 Y H 0.0000 Buried
205 I H -1.3021 Soluble
206 C H 0.0000 Buried
207 N H 0.0000 Buried
208 V H 0.0000 Buried
209 N H -1.8845 Soluble
210 H H 0.0000 Buried
211 K H -2.7687 Soluble
212 P H -1.6545 Soluble
213 S H -1.8229 Soluble
214 N H -2.5978 Soluble
215 T H -2.1030 Soluble
216 K H -2.5963 Soluble
217 V H -1.3833 Soluble
218 D H -2.3120 Soluble
219 K H -2.0039 Soluble
220 K H -2.6153 Soluble
221 V H 0.0000 Buried
222 E H -2.9661 Soluble
223 P H -1.8675 Soluble
224 K H -2.5045 Soluble
1 E L -1.6290 Soluble
2 I L 0.0000 Buried
3 V L 0.7174 Aggregation-prone
4 L L 0.0000 Buried
5 T L -0.6143 Soluble
6 Q L 0.0000 Buried
7 S L -0.7947 Soluble
8 P L -0.3380 Soluble
9 A L -0.4307 Soluble
10 T L -0.3062 Soluble
11 L L -0.1771 Soluble
12 S L -0.5876 Soluble
13 L L -1.1214 Soluble
14 S L -1.6192 Soluble
15 P L -1.9514 Soluble
16 G L -1.9434 Soluble
17 E L -2.7277 Soluble
18 R L -2.7941 Soluble
19 A L 0.0000 Buried
20 T L -0.6824 Soluble
21 L L 0.0000 Buried
22 S L -0.9211 Soluble
23 C L 0.0000 Buried
24 R L -2.3197 Soluble
25 A L -1.0690 Soluble
26 S L -0.7656 Soluble
27 Q L -1.1268 Soluble
28 S L -1.2480 Soluble
29 V L 0.0000 Buried
30 S L -1.1315 Soluble
36 D L -1.7930 Soluble
37 A L -1.0184 Soluble
38 Y L -0.3266 Soluble
39 L L 0.0000 Buried
40 A L 0.0000 Buried
41 W L 0.0000 Buried
42 Y L 0.0000 Buried
43 Q L 0.0000 Buried
44 Q L 0.0000 Buried
45 K L -1.8555 Soluble
46 P L -1.3477 Soluble
47 G L -1.5158 Soluble
48 Q L -2.1029 Soluble
49 A L -1.3580 Soluble
50 P L 0.0000 Buried
51 R L -1.8650 Soluble
52 L L -0.7833 Soluble
53 L L 0.0000 Buried
54 I L 0.0000 Buried
55 Y L -0.0750 Soluble
56 D L -0.6477 Soluble
57 A L 0.0000 Buried
65 S L -0.6936 Soluble
66 S L -0.7538 Soluble
67 R L -1.2824 Soluble
68 A L -0.8829 Soluble
69 T L -0.7267 Soluble
70 G L -0.5719 Soluble
71 V L -0.6231 Soluble
72 P L -0.3990 Soluble
74 A L -0.4020 Soluble
75 R L -0.8513 Soluble
76 F L 0.0000 Buried
77 S L -0.5752 Soluble
78 G L 0.0000 Buried
79 S L -0.7211 Soluble
80 G L -1.1481 Soluble
83 S L -1.4201 Soluble
84 G L -1.4298 Soluble
85 T L -1.7154 Soluble
86 D L -2.2662 Soluble
87 F L 0.0000 Buried
88 T L -0.8331 Soluble
89 L L 0.0000 Buried
90 T L -0.5806 Soluble
91 I L 0.0000 Buried
92 S L -1.4231 Soluble
93 S L -1.7847 Soluble
94 L L 0.0000 Buried
95 E L -2.2855 Soluble
96 P L -2.0822 Soluble
97 E L -2.4772 Soluble
98 D L 0.0000 Buried
99 F L -1.1451 Soluble
100 A L 0.0000 Buried
101 V L -0.3976 Soluble
102 Y L 0.0000 Buried
103 Y L 0.0000 Buried
104 C L 0.0000 Buried
105 H L 0.0000 Buried
106 Q L 0.0000 Buried
107 Y L 0.0000 Buried
108 I L 0.3428 Aggregation-prone
109 Q L -0.3622 Soluble
113 L L 0.1107 Aggregation-prone
114 H L -0.8993 Soluble
115 S L -0.9844 Soluble
116 F L 0.0000 Buried
117 T L -0.1058 Soluble
118 F L 0.0806 Aggregation-prone
119 G L 0.0000 Buried
120 Q L -1.3355 Soluble
121 G L -0.9729 Soluble
122 T L 0.0000 Buried
123 K L -0.8733 Soluble
124 V L 0.0000 Buried
125 E L 0.0000 Buried
126 I L 0.0000 Buried
127 K L -1.3473 Soluble
128 R L -0.9090 Soluble
129 T L 0.0368 Aggregation-prone
130 V L 0.5946 Aggregation-prone
131 A L 0.2743 Aggregation-prone
132 A L 0.0029 Aggregation-prone
133 P L 0.0000 Buried
134 S L 0.0462 Aggregation-prone
135 V L 0.0823 Aggregation-prone
136 F L 0.1477 Aggregation-prone
137 I L 0.0000 Buried
138 F L 0.0000 Buried
139 P L -0.8085 Soluble
140 P L 0.0000 Buried
141 S L -1.8177 Soluble
142 D L -3.1437 Soluble
143 E L -3.0240 Soluble
144 Q L 0.0000 Buried
145 L L -2.0791 Soluble
146 K L -2.9072 Soluble
147 S L -1.8536 Soluble
148 G L -1.3020 Soluble
149 T L -1.0383 Soluble
150 A L 0.0000 Buried
151 S L 0.0000 Buried
152 V L 0.0000 Buried
153 V L 0.0000 Buried
154 C L 0.0000 Buried
155 L L 0.0000 Buried
156 L L 0.0000 Buried
157 N L 0.0000 Buried
158 N L -0.7345 Soluble
159 F L 0.0000 Buried
160 Y L 0.0000 Buried
161 P L -1.5424 Soluble
162 R L -2.4601 Soluble
163 E L -3.0595 Soluble
164 A L -2.2057 Soluble
165 K L -2.1321 Soluble
166 V L -1.0401 Soluble
167 Q L -0.8095 Soluble
168 W L 0.0000 Buried
169 K L -0.8303 Soluble
170 V L 0.0000 Buried
171 D L -1.6487 Soluble
172 N L -1.4871 Soluble
173 A L -0.3998 Soluble
174 L L 0.1391 Aggregation-prone
175 Q L -0.5158 Soluble
176 S L -0.6179 Soluble
177 G L -0.9226 Soluble
178 N L -0.8640 Soluble
179 S L -1.0661 Soluble
180 Q L -1.1262 Soluble
181 E L -1.8071 Soluble
182 S L -0.9604 Soluble
183 V L -0.8480 Soluble
184 T L -1.1568 Soluble
185 E L -2.2769 Soluble
186 Q L 0.0000 Buried
187 D L -2.0087 Soluble
188 S L -2.1513 Soluble
189 K L -2.4861 Soluble
190 D L -1.7583 Soluble
191 S L -1.6751 Soluble
192 T L 0.0000 Buried
193 Y L 0.0000 Buried
194 S L 0.0000 Buried
195 L L 0.0000 Buried
196 S L 0.0000 Buried
197 S L 0.0000 Buried
198 T L -0.6086 Soluble
199 L L 0.0000 Buried
200 T L -0.2569 Soluble
201 L L -0.5018 Soluble
202 S L -0.9868 Soluble
203 K L -2.0814 Soluble
204 A L -1.8335 Soluble
205 D L -2.2725 Soluble
206 Y L 0.0000 Buried
207 E L -3.6231 Soluble
208 K L -3.4874 Soluble
209 H L -3.1702 Soluble
210 K L -3.2759 Soluble
211 V L -1.3201 Soluble
212 Y L 0.0000 Buried
213 A L 0.0000 Buried
214 C L 0.0000 Buried
215 E L -0.9762 Soluble
216 V L 0.0000 Buried
217 T L -1.2342 Soluble
218 H L 0.0000 Buried
219 Q L -1.4807 Soluble
220 G L -0.3344 Soluble
221 L L -0.2026 Soluble
222 S L -0.4788 Soluble
223 S L -0.4510 Soluble
224 P L -0.6147 Soluble
225 V L -0.1535 Soluble
226 T L -0.6389 Soluble
227 K L -0.8475 Soluble
228 S L -0.6716 Soluble
229 F L -1.0428 Soluble
230 N L -2.3234 Soluble
231 R L -2.9339 Soluble

3D Structure — colored by A4D score

Sequence - click residue to focus in viewer  |  colored by A4D score
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Color Legend (B-factor = A4D Score)
Score > 1.5 — highly aggregation-prone
Score 0.5–1.5 — aggregation-prone
Score ≈ 0 — buried
Score −1 to −0.5 — soluble
Score < −2.5 — highly soluble
pH Structure
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A4D Score Threshold
Highlight residues > threshold in the sequence panel
CDR Regions
HCDR1
HCDR2
HCDR3
LCDR1
LCDR2
LCDR3
Display Options

pH-Dependent Aggregation Profiles

A4D scores calculated across 11 pH conditions (4.0–9.0, step 0.5). Click a row to view the structure at that pH. The input structure is globular — max score is recommended for pH analysis.

pH Avg A4D Score Max A4D Score Downloads
4.0 -0.722 5.5519 CSV PDB
4.5 -0.768 5.5519 CSV PDB
5.0 -0.8224 5.5519 CSV PDB
5.5 -0.8737 5.5519 CSV PDB
6.0 -0.9095 5.5519 CSV PDB
6.5 -0.92 5.5519 CSV PDB
7.0 -0.905 5.5519 CSV PDB
7.5 -0.8734 5.5519 CSV PDB
8.0 -0.8328 5.5519 CSV PDB
8.5 -0.7861 5.5519 CSV PDB
9.0 -0.7338 5.5519 CSV PDB
Average A4D Score vs pH
Max A4D Score vs pH