CABS-flex 2.0

CABS-flex is a protein simulation tool that implements the CABS simulation engine (which is the coarse-grained protein model reviewed here) for fast simulations of proteins flexibility. CABS-flex is presently available as the webserver 2.0 and as the standalone package. In comparison to the web-server, the standalone package offers many more functionalities that enable guiding the modeling process and combinations with other tools.

The development, functionalities, and applications of the CABS-flex method have been described so far in the following papers:

7. Protocols for fast simulations of protein structure flexibility using CABS-flex and SURPASS

6. CABS-flex 2.0: a web server for fast simulations of flexibility of protein structures

5. CABS-flex standalone: a simulation environment for fast modeling of protein flexibility

4. AGGRESCAN3D (A3D): server for prediction of aggregation properties of protein structures

3. CABS-flex predictions of protein flexibility compared with NMR ensembles

2. CABS-flex: server for fast simulation of protein structure fluctuations