Sebastian Kmiecik

Head of the Laboratory

Professor at University of Warsaw and head of Laboratory of Computational Biology at Biological and Chemical Research Centre, University of Warsaw. 

Member of Laboratory of Theory of Biopolymers at Faculty of Chemistry, University of Warsaw. Former employee and partner of Selvita biotechnology company.

Google Scholar citations, ORCID

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Publications

81. A3D Model Organism Database (A3D-MODB): a database for proteome aggregation predictions in model organismsNucleic Acids Research, 52: D360-D367, 2024Badaczewska-Dawid Aleksandra E, Kuriata Aleksander, Pintado-Grima Carlos, Garcia-Pardo Javier, Burdukiewicz Michał, Iglesias Valentín, Kmiecik Sebastian, Ventura Salvador
82. Structure prediction of linear and cyclic peptides using CABS-flexBriefings In Bioinformatics, 25: bbae003, 2024Badaczewska-Dawid Aleksandra, Wróblewski Karol, Kurciński Mateusz, Kmiecik Sebastian
83. A3DyDB: exploring structural aggregation propensities in the yeast proteomeMicrobial Cell Factories, 22: 186, 2023Javier Garcia-Pardo, Aleksandra E. Badaczewska-Dawid, Carlos Pintado-Grima, Valentin Iglesias, Kuriata Aleksander, Kmiecik Sebastian, Salvador Ventura
84. Efficient improvement of the proliferation, differentiation, and anti-arthritic capacity of mesenchymal stem cells by simply culturing on the immobilized FGF2 derived peptide, 44-ERGVVSIKGV-53Journal Of Advanced Research, 2023Soo Bin Lee, Ahmed Abdal Dayem, Kmiecik Sebastian, Kyung Min Lim, Dong Sik Seo, Hyeong-Taek Kim, Polash Kumar Biswas, Minjae Do, Deok-Ho Kim, Ssang-Goo Cho
85. Fatty Acids Reverse the Supramolecular Chirality of Insulin FibrilsJ. Phys. Chem. Lett., 14, 30: 6935–6939, 2023Aidan P. Holman, Kimberly Quinn, Kumar Rakesh, Kmiecik Sebastian, Abid Ali, Dmitry Kurouski
86. Menthol- and thymol-based ciprofloxacin derivatives against Mycobacterium tuberculosis: in vitro activity, lipophilicity, and computational studiesScientific Reports, 13(1): 16328, 2023Daniel Szulczyk, Mateusz Woziński, Michał Koliński, Kmiecik Sebastian, Agnieszka Głogowska, Ewa Augustynowicz-Kopeć, Michał A Dobrowolski, Piotr Roszkowski, Marta Struga, Krzesimir Ciura
87. N-Acylated Ciprofloxacin Derivatives: Synthesis and In Vitro Biological Evaluation as Antibacterial and Anticancer AgentsAcs Omega, 8: 18663-18684, 2023Struga Marta, Roszkowski Piotr, Bielenica Anna, Otto-Ślusarczyk Dagmara, Stępień Karolina, Stefańska Joanna, Zabost Anna, Augustynowicz-Kopeć Ewa, Koliński Michał, Kmiecik Sebastian, Myslovska Alina, Wrzosek Małgorzata
88. A3D 2.0 Update for the Prediction and Optimization of Protein SolubilityMethods in Molecular Biology, 2406, 2022Jordi Pujols, Valentin Iglesias, Jaime Santos, Kuriata Aleksander, Kmiecik Sebastian, Salvador Ventura
89. A3D database: structure-based predictions of protein aggregation for the human proteomeBioinformatics, 38: 3121-3123, 2022Badaczewska-Dawid Aleksandra E, Garcia-Pardo Javier, Kuriata Aleksander, Pujols Jordi, Ventura Salvador, Kmiecik Sebastian
90. Design and Synthesis of Menthol and Thymol Derived Ciprofloxacin: Influence of Structural Modifications on the Antibacterial Activity and Anticancer PropertiesInternational Journal Of Molecular Sciences, 23, 2022Szostek Tomasz, Szulczyk Daniel, Szymańska-Majchrzak Jolanta, Koliński Michał, Kmiecik Sebastian, Otto-Ślusarczyk Dagmara, Zawodnik Aleksandra, Rajkowska Eliza, Chaniewicz Kinga, Struga Marta, Roszkowski Piotr
91. MAPIYA contact map server for identification and visualization of molecular interactions in proteins and biological complexesNucleic Acids Research: gkac307, 2022Aleksandra E Badaczewska-Dawid, Chandran Nithin, Wróblewski Karol, Kurciński Mateusz, Kmiecik Sebastian
92. Protocols for Rational Design of Protein Solubility and Aggregation Properties Using Aggrescan3D StandaloneMethods in Molecular Biology, 2340: 17-40, 2022Kuriata Aleksander, Aleksandra Badaczewska-Dawid, Jordi Pujols, Salvador Ventura, Kmiecik Sebastian
93. The Effect of Conjugation of Ciprofloxacin and Moxifloxacin with Fatty Acids on Their Antibacterial and Anticancer ActivityInternational Journal Of Molecular Sciences, 23, 2022Chrzanowska Alicja, Struga Marta, Roszkowski Piotr, Koliński Michał, Kmiecik Sebastian, Jałbrzykowska Karolina, Zabost Anna, Stefańska Joanna, Augustynowicz-Kopeć Ewa, Wrzosek Małgorzata, Bielenica Anna
94. Molecular Dynamics Scoring of Protein–Peptide Models Derived from Coarse-Grained DockingMolecules, 26(11): 3293, 2021Zalewski Mateusz, Kmiecik Sebastian, Koliński Michał
95. Phosphorylation of the conserved C-terminal domain of ribosomal P-proteins impairs the mode of interaction with plant toxinsFebs Letters, 2021Horbowicz-Drożdżal Patrycja, Kamel Karol, Kmiecik Sebastian, Borkiewicz Lidia, Tumer Nilgun E., Shaw Pang-Chui, Tchórzewski Marek, Grela Przemysław

...And 66 more - see all publications of this author