Aleksander Kuriata photo

Aleksander Kuriata

Contact

Emailaleksander.kuriata@student.uw.edu.pl
AddressRoom 3.132
Biological and Chemical Research Centre
University of Warsaw
Zwirki i Wigury 101
02-089 Warsaw, Poland
rooms 3.132, 3.133

Publications

  1. A3D Model Organism Database (A3D-MODB): a database for proteome aggregation predictions in model organismsNucleic Acids Research, 52: D360-D367, 2024Badaczewska-Dawid Aleksandra E, Kuriata Aleksander, Pintado-Grima Carlos, Garcia-Pardo Javier, Burdukiewicz Michał, Iglesias Valentín, Kmiecik Sebastian, Ventura Salvador
  2. Aggrescan4D: structure-informed analysis of pH-dependent protein aggregationNucleic Acids Research, : gkae382, 2024Bárcenas Oriol, Kuriata Aleksander, Zalewski Mateusz, Iglesias Valentín, Pintado-Grima Carlos, Firlik Grzegorz, Burdukiewicz Michał, Kmiecik Sebastian, Ventura Salvador
  3. A3DyDB: exploring structural aggregation propensities in the yeast proteomeMicrobial Cell Factories, 22: 186, 2023Javier Garcia-Pardo, Aleksandra E. Badaczewska-Dawid, Carlos Pintado-Grima, Valentin Iglesias, Kuriata Aleksander, Kmiecik Sebastian, Salvador Ventura
  4. A3D 2.0 Update for the Prediction and Optimization of Protein SolubilityMethods in Molecular Biology, 2406, 2022Jordi Pujols, Valentin Iglesias, Jaime Santos, Kuriata Aleksander, Kmiecik Sebastian, Salvador Ventura
  5. A3D database: structure-based predictions of protein aggregation for the human proteomeBioinformatics, 38: 3121-3123, 2022Badaczewska-Dawid Aleksandra E, Garcia-Pardo Javier, Kuriata Aleksander, Pujols Jordi, Ventura Salvador, Kmiecik Sebastian
  6. Protocols for Rational Design of Protein Solubility and Aggregation Properties Using Aggrescan3D StandaloneMethods in Molecular Biology, 2340: 17-40, 2022Kuriata Aleksander, Aleksandra Badaczewska-Dawid, Jordi Pujols, Salvador Ventura, Kmiecik Sebastian
  7. Aggrescan3D (A3D) 2.0: prediction and engineering of protein solubilityNucleic Acids Research, 47: W300-W307, 2019Kuriata Aleksander, Iglesias Valentin, Pujols Jordi, Kurciński Mateusz, Kmiecik Sebastian, Ventura Salvador
  8. Aggrescan3D standalone package for structure-based prediction of protein aggregation propertiesBioinformatics, btz143, 2019Kuriata Aleksander, Iglesias V., Kurciński Mateusz, Ventura S., Kmiecik Sebastian
  9. CABS-dock standalone: a toolbox for flexible protein-peptide dockingBioinformatics, btz185, 2019Kurciński Mateusz, Ciemny M. P., Oleniecki T., Kuriata Aleksander, Badaczewska-Dawid A. E., Kolinski A., Kmiecik Sebastian
  10. CABS-flex 2.0: a web server for fast simulations of flexibility of protein structuresNucleic Acids Res, 46: W338-W343, 2018Kuriata Aleksander, Gierut A. M., Oleniecki T., Ciemny Maciej, Kolinski A., Kurciński Mateusz, Kmiecik Sebastian
  11. CABS-flex standalone: a simulation environment for fast modeling of protein flexibilityBioinformatics, 4: 694–695, 2018Kurciński Mateusz, Oleniecki T., Ciemny Maciej, Kuriata Aleksander, Kolinski A., Kmiecik Sebastian
  12. Combining Structural Aggregation Propensity and Stability Predictions To Redesign Protein SolubilityMolecular Pharmaceutics, 15: 3846-3859, 2018Gil-Garcia Marcos, Bano-Polo Manuel, Varejao Nathalia, Jarnroz Michal, Kuriata Aleksander, Diaz-Caballero Marta, Lascorz Jara, More Bertrand, Navarro Susanna, Reverter David, Kmiecik Sebastian, Ventura Salvador